##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933575.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 105428 Sequences flagged as poor quality 0 Sequence length 51 %GC 32 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.976922639147094 33.0 31.0 34.0 30.0 34.0 2 32.24470728838639 34.0 31.0 34.0 30.0 34.0 3 32.23513677580908 33.0 31.0 34.0 30.0 34.0 4 35.876370603634705 37.0 35.0 37.0 35.0 37.0 5 35.98455818188717 37.0 35.0 37.0 35.0 37.0 6 36.006117919338315 37.0 35.0 37.0 35.0 37.0 7 35.96682095837918 37.0 35.0 37.0 35.0 37.0 8 35.81997192396707 37.0 35.0 37.0 35.0 37.0 9 37.65079485525667 39.0 38.0 39.0 35.0 39.0 10 37.3000436316728 39.0 37.0 39.0 34.0 39.0 11 37.312431232689605 39.0 37.0 39.0 34.0 39.0 12 37.321318814736124 39.0 37.0 39.0 34.0 39.0 13 37.263459422544294 39.0 37.0 39.0 34.0 39.0 14 38.45276397162044 40.0 38.0 41.0 34.0 41.0 15 38.48399855825777 40.0 38.0 41.0 34.0 41.0 16 38.59684334332435 40.0 38.0 41.0 34.0 41.0 17 38.60077019387639 40.0 38.0 41.0 34.0 41.0 18 38.02886330007209 39.0 38.0 40.0 34.0 41.0 19 37.36824183328907 37.0 37.0 40.0 34.0 41.0 20 36.4771407975111 35.0 35.0 40.0 34.0 41.0 21 36.380060325530216 35.0 35.0 40.0 33.0 41.0 22 36.375346207838525 35.0 35.0 40.0 33.0 41.0 23 36.28279015062412 35.0 35.0 40.0 33.0 41.0 24 36.11764426907463 35.0 35.0 40.0 33.0 41.0 25 36.017206055317374 35.0 35.0 40.0 33.0 41.0 26 36.02083886633532 35.0 35.0 40.0 33.0 41.0 27 35.96420305801116 35.0 35.0 40.0 33.0 41.0 28 35.90127859771598 35.0 35.0 40.0 33.0 41.0 29 35.657586219979514 35.0 35.0 40.0 32.0 41.0 30 35.28643244678833 35.0 35.0 40.0 30.0 41.0 31 34.67222180066017 35.0 35.0 40.0 25.0 41.0 32 33.92475433471184 35.0 34.0 40.0 21.0 41.0 33 32.88853056114125 35.0 33.0 40.0 15.0 41.0 34 32.03990401031984 35.0 31.0 40.0 10.0 41.0 35 31.524585499108397 35.0 30.0 40.0 8.0 41.0 36 31.19450240922715 35.0 29.0 40.0 7.0 41.0 37 30.964506582691506 35.0 26.0 40.0 7.0 41.0 38 30.743597526273856 35.0 25.0 40.0 7.0 41.0 39 30.66194938725955 35.0 24.0 40.0 7.0 41.0 40 30.555592442235458 35.0 23.0 40.0 7.0 41.0 41 30.427903403270477 35.0 23.0 40.0 7.0 41.0 42 30.139052244185606 35.0 22.0 40.0 7.0 41.0 43 29.892428956254506 35.0 22.0 40.0 7.0 41.0 44 29.635390977728875 35.0 21.0 39.0 7.0 41.0 45 29.618289259020376 35.0 20.0 39.0 7.0 41.0 46 29.307726600144175 35.0 20.0 39.0 7.0 41.0 47 29.23263269719619 35.0 20.0 39.0 7.0 41.0 48 29.127347573699588 35.0 20.0 39.0 7.0 41.0 49 29.129225632659256 35.0 20.0 39.0 7.0 41.0 50 28.897664756990554 35.0 20.0 39.0 7.0 41.0 51 28.125725613688964 34.0 18.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 3.0 13 6.0 14 3.0 15 9.0 16 9.0 17 25.0 18 56.0 19 101.0 20 236.0 21 360.0 22 622.0 23 1046.0 24 1851.0 25 3457.0 26 5254.0 27 5321.0 28 4527.0 29 3978.0 30 3692.0 31 3563.0 32 3628.0 33 3983.0 34 5596.0 35 8796.0 36 10919.0 37 9338.0 38 15743.0 39 13298.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 15.784231892855788 3.6660090298592407 30.94339264711462 49.606366430170354 2 52.881587434078234 3.745684258451265 30.06222255947187 13.310505747998636 3 13.012672155404637 4.248397010281899 70.12368630724286 12.615244527070606 4 10.745722199036308 3.8576089843305383 69.67124483059528 15.725423986037864 5 8.630534582843268 4.965474067610122 71.22396327351368 15.180028076032933 6 11.774860568349963 5.474826421823424 72.99863413893843 9.751678870888188 7 44.65417156732557 2.297302424403384 48.59430132412641 4.45422468414463 8 42.73153242022992 2.7819933983382024 48.271806351253936 6.214667830177941 9 39.38801836324316 4.431460333118337 50.56626323177903 5.614258071859468 10 20.219486284478506 15.094661759684334 53.96668816633152 10.719163789505634 11 13.454679971165156 13.102781044883713 57.36142201312744 16.08111697082369 12 12.494783169556474 10.776074667071365 61.402094320294424 15.32704784307774 13 14.60902227112342 12.767955381871987 62.39234358993816 10.230678757066434 14 12.419850514094927 14.70292521910688 60.16238570398755 12.714838562810638 15 8.191372310961036 13.412945327616951 63.698448230071705 14.697234131350307 16 8.045301058542323 13.533406685131085 60.998027089577725 17.423265166748873 17 7.978905034715636 13.44709185415639 58.9406988655765 19.633304245551468 18 8.74720188185302 12.503319801191335 62.442614865121215 16.306863451834428 19 9.615092764730433 14.12053723868422 62.32879310998975 13.935576886595591 20 9.819023409340973 17.2895246044694 60.18040748188337 12.711044504306257 21 9.021322608794629 18.097659065902796 60.317942102667224 12.563076222635353 22 7.457221990363092 17.146298895928975 58.16386538680427 17.23261372690367 23 7.956140683689343 17.2895246044694 56.46886974997154 18.285464961869714 24 9.293546306484046 16.044124900405965 56.38445194824904 18.27787684486095 25 8.308039609970786 17.815001707326328 54.61642068520697 19.260537997495923 26 8.543271237242479 18.110938270668132 56.569412300337675 16.776378191751718 27 9.699510566452934 17.161475129946506 58.014000075881164 15.12501422771939 28 7.754107068330994 15.408620100921958 58.676063284895854 18.161209545851197 29 10.616724209887316 14.261865917972456 56.94407557764541 18.17733429449482 30 14.161323367606329 15.362142884243275 54.98728990401032 15.489243844140077 31 12.438820806616837 19.705391357134726 50.922904731190954 16.93288310505748 32 12.392343589938157 20.453769397124102 49.00880221573017 18.145084797207574 33 14.069317448875063 16.982205865614446 47.78616686269302 21.16230982281747 34 14.474333194217856 16.728003945820845 47.107030390408624 21.690632469552682 35 16.59710892741966 17.7988769586827 43.99400538756308 21.61000872633456 36 17.598740372576547 17.560799787532723 44.898888340858214 19.941571499032516 37 13.504002731722123 19.65512008195166 47.43901050954206 19.401866676784156 38 13.010775126152446 22.84592328413704 47.67993322457033 16.46336836514019 39 15.844936828925901 20.044011078650833 46.99605417915544 17.114997913267825 40 15.596425996888872 16.461471335888 47.39822438061994 20.543878286603178 41 15.745342793185872 16.672990097507302 44.76514777857874 22.81651933072808 42 20.255529840270135 16.126645672876275 45.661494100239025 17.95633038661456 43 18.68384110482984 16.70998216792503 46.74469780324013 17.86147892400501 44 15.198998368554841 17.52570474636719 45.29631596919225 21.978980915885725 45 17.33695033577418 15.539515119323141 44.277611260765646 22.84592328413704 46 18.168797662859962 15.94737640854422 47.54998672079523 18.333839207800583 47 13.144515688431916 18.241833289069316 50.442956330386615 18.170694692112153 48 13.643434381758166 17.16052661532041 50.37086921880335 18.82516978411807 49 18.124217475433472 13.637743294001595 50.74742952536329 17.490609705201653 50 16.39317828280912 12.238684220510681 47.509200591873125 23.85893690480707 51 13.983951132526466 12.26429411541526 45.03452593238988 28.7172288196684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 246.0 1 440.0 2 634.0 3 9330.5 4 18027.0 5 10935.5 6 3844.0 7 3436.5 8 3029.0 9 2953.0 10 2877.0 11 2762.5 12 2648.0 13 2497.5 14 2347.0 15 2193.0 16 2039.0 17 1832.0 18 1625.0 19 1502.5 20 1380.0 21 1228.5 22 1077.0 23 973.0 24 869.0 25 813.5 26 712.5 27 667.0 28 661.5 29 656.0 30 703.0 31 750.0 32 798.0 33 846.0 34 855.5 35 865.0 36 1016.5 37 1168.0 38 1317.0 39 1466.0 40 2080.0 41 2694.0 42 3511.5 43 4329.0 44 4822.0 45 5315.0 46 7009.5 47 8704.0 48 10264.5 49 11825.0 50 11192.5 51 10560.0 52 8305.0 53 6050.0 54 4440.0 55 2830.0 56 2153.0 57 1476.0 58 1220.0 59 964.0 60 917.0 61 870.0 62 778.5 63 687.0 64 588.0 65 489.0 66 400.5 67 312.0 68 237.0 69 162.0 70 146.5 71 131.0 72 108.5 73 86.0 74 72.5 75 43.0 76 27.0 77 23.0 78 19.0 79 13.5 80 8.0 81 9.0 82 10.0 83 5.5 84 1.0 85 1.0 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 105428.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.718177334294495 #Duplication Level Percentage of deduplicated Percentage of total 1 81.4510717943285 43.754031187160905 2 9.58788007204153 10.300868839397504 3 3.8581064378288663 6.217513374056228 4 1.7833810078751282 3.831999089425959 5 0.9464279408129392 2.542019197936032 6 0.550905816294099 1.7756193800508402 7 0.34608185895398524 1.3013620670030732 8 0.22248119504184766 0.9561027431042988 9 0.16068086308577886 0.7768334787722426 >10 0.9905710350672741 9.839890731115073 >50 0.06709750326658898 2.3485222142125433 >100 0.026485856552600915 2.422506355047995 >500 0.005297171310520182 1.5887619987100203 >1k 0.001765723770173394 1.0566452934704254 >5k 0.0 0.0 >10k+ 0.001765723770173394 11.28732405053686 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11900 11.28732405053686 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCC 1114 1.0566452934704254 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 640 0.607049360701142 No Hit CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 519 0.49227909094358235 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 516 0.48943354706529574 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 438 0.41544940622984405 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 287 0.2722236976894184 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 209 0.1982395568539667 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 192 0.18211480821034262 No Hit TCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 161 0.15271085480138105 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 148 0.1403801646621391 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 142 0.1346890769055659 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 137 0.1299465037750882 No Hit CGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTG 136 0.12899798914899266 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTTT 127 0.12046135751413287 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 124 0.11761581363584625 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCT 116 0.11002769662708199 No Hit CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATG 113 0.10718215274879539 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA 113 0.10718215274879539 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTT 111 0.10528512349660432 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5254771028569261 0.0 2 0.0 0.0 0.0 1.8116629358424707 0.0 3 0.0 0.0 0.0 2.554349888075274 0.0 4 0.0 0.0 0.0 3.5597753917365407 0.0 5 0.0 0.0 0.0 5.591493720833175 0.0 6 0.0 0.0 0.0 6.943127063019312 0.0 7 0.0 0.0 0.0 8.424706908980536 0.0 8 0.0 0.0 0.0 10.77322912319308 0.0 9 0.0 0.0 0.0 11.655347725461926 0.0 10 0.0 0.0 0.0 13.997230337291802 0.0 11 0.0 0.0 0.0 19.54604089995068 0.0 12 0.0 0.0 0.0 24.390105095420573 0.0 13 0.0 0.0 0.0 25.93238987745191 0.0 14 0.0 0.0 0.0 26.47399172895246 0.0 15 0.0 0.0 0.0 27.308684599916532 0.0 16 0.0 0.0 0.0 29.085252494593465 0.0 17 0.0 0.0 0.0 31.33987176082255 0.0 18 0.0 0.0 0.0 33.50343362294647 0.0 19 0.0 0.0 0.0 34.92146298895929 0.0 20 0.0 0.0 0.0 36.09572409606556 0.0 21 0.0 0.0 0.0 37.419850514094925 0.0 22 0.0 0.0 0.0 38.56375915316614 0.0 23 0.0 0.0 0.0 39.41267974352164 0.0 24 0.0 0.0 0.0 39.85279053002997 0.0 25 0.0 0.0 0.0 40.168645900519785 0.0 26 0.0 0.0 0.0 40.42379633493948 0.0 27 0.0 0.0 0.0 40.657130932958985 0.0 28 0.0 0.0 0.0 40.842091285047616 0.0 29 0.0 0.0 0.0 41.020412034753576 0.0 30 0.0 0.0 0.0 41.20537238684221 0.0 31 0.0 0.0 0.0 41.35049512463482 0.0 32 0.0 0.0 0.0 41.48044162840991 0.0 33 0.0 0.0 0.0 41.645483173350534 0.0 34 0.0 0.0 0.0 41.76025344310809 0.0 35 0.0 0.0 0.0 41.90158212239633 0.0 36 0.0 0.0 0.0 42.033425655423606 0.0 37 0.0 0.0 0.0 42.16906324695527 0.0 38 0.0 0.0 0.0 42.303752323860834 0.0 39 0.0 0.0 0.0 42.460257237166594 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCTCTG 20 7.00413E-4 45.0 1 GGGCACA 20 7.00413E-4 45.0 7 GGACCGA 25 3.8666585E-5 45.0 8 CTCTCGG 20 7.00413E-4 45.0 2 TGTTCGG 20 7.00413E-4 45.0 2 TGCTTTG 25 3.8666585E-5 45.0 1 CGGGATT 20 7.00413E-4 45.0 6 CGGGAGA 25 3.8666585E-5 45.0 6 GACCGAT 25 3.8666585E-5 45.0 9 CGGGACC 25 3.8666585E-5 45.0 6 CGGGAAT 20 7.00413E-4 45.0 6 TGTAGGG 25 3.8666585E-5 45.0 3 GGCCACC 25 3.8666585E-5 45.0 8 GATTTGT 20 7.00413E-4 45.0 10 GGGACCG 25 3.8666585E-5 45.0 7 TGGGCTT 25 3.8666585E-5 45.0 6 TGGGTGT 35 1.1979319E-7 45.0 6 TGGGCAC 25 3.8666585E-5 45.0 6 CCGGGAT 20 7.00413E-4 45.0 5 GGGAAGT 20 7.00413E-4 45.0 7 >>END_MODULE