##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933497.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 405987 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.55285021441573 31.0 28.0 31.0 16.0 33.0 2 28.84814292083244 31.0 30.0 33.0 16.0 34.0 3 29.045486678144865 31.0 30.0 33.0 16.0 34.0 4 32.022771665102574 35.0 30.0 37.0 19.0 37.0 5 33.63789234630666 35.0 33.0 37.0 28.0 37.0 6 32.64918581136835 35.0 33.0 37.0 17.0 37.0 7 31.846344833701572 35.0 30.0 35.0 25.0 37.0 8 32.80738545815506 35.0 32.0 35.0 27.0 37.0 9 32.68103658491528 35.0 31.0 37.0 25.0 39.0 10 31.585201003973033 35.0 28.0 39.0 15.0 39.0 11 31.969346309118272 35.0 27.0 39.0 15.0 39.0 12 32.87197373314909 35.0 31.0 39.0 22.0 39.0 13 33.03387546891896 35.0 31.0 39.0 23.0 39.0 14 33.27250872564885 36.0 31.0 39.0 18.0 41.0 15 33.76441610199341 36.0 31.0 39.0 23.0 41.0 16 34.0181927007515 36.0 32.0 40.0 25.0 41.0 17 31.981556059676787 35.0 27.0 39.0 17.0 41.0 18 32.756189237586426 36.0 30.0 39.0 21.0 39.0 19 32.54146807656403 36.0 30.0 37.0 18.0 39.0 20 32.3871133804777 34.0 30.0 37.0 24.0 39.0 21 32.84939419242488 35.0 31.0 37.0 24.0 39.0 22 33.23130543588834 35.0 31.0 38.0 25.0 39.0 23 34.2169650752364 35.0 33.0 38.0 27.0 40.0 24 32.45305637865252 35.0 31.0 37.0 22.0 39.0 25 31.557503072758486 35.0 30.0 37.0 18.0 39.0 26 31.12095953811329 33.0 27.0 37.0 20.0 39.0 27 32.57935598923118 35.0 30.0 38.0 22.0 40.0 28 32.64478172946424 35.0 31.0 38.0 22.0 39.0 29 32.970459645259574 35.0 31.0 38.0 22.0 40.0 30 31.873441760450458 35.0 30.0 38.0 18.0 40.0 31 32.10481123779825 35.0 30.0 38.0 21.0 40.0 32 32.0155793165791 35.0 30.0 38.0 19.0 40.0 33 32.11138780305773 35.0 31.0 38.0 17.0 40.0 34 31.371977427848677 35.0 30.0 38.0 14.0 40.0 35 30.9626071770771 35.0 29.0 38.0 10.0 40.0 36 30.367627534871808 35.0 27.0 38.0 9.0 40.0 37 30.519450130176583 35.0 28.0 38.0 9.0 40.0 38 30.30893353728075 35.0 26.0 38.0 8.0 40.0 39 29.933520038818976 35.0 25.0 38.0 8.0 40.0 40 29.64248362632301 34.0 24.0 38.0 8.0 40.0 41 29.18531135233394 34.0 23.0 38.0 8.0 40.0 42 29.509383305376772 34.0 24.0 38.0 8.0 40.0 43 29.576240125915362 34.0 24.0 38.0 7.0 40.0 44 29.589839083517454 34.0 24.0 38.0 7.0 40.0 45 29.883166209755483 35.0 24.0 38.0 7.0 40.0 46 29.660489128962258 35.0 24.0 38.0 7.0 40.0 47 29.651375536655113 35.0 23.0 38.0 7.0 40.0 48 29.40184291615249 34.0 23.0 38.0 7.0 40.0 49 29.26937562040164 34.0 24.0 37.0 7.0 40.0 50 29.421025796392495 34.0 24.0 38.0 7.0 40.0 51 27.677201486747112 32.0 21.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 16.0 10 19.0 11 37.0 12 28.0 13 59.0 14 101.0 15 229.0 16 459.0 17 714.0 18 1352.0 19 2112.0 20 3003.0 21 4308.0 22 5911.0 23 8206.0 24 11353.0 25 15169.0 26 19546.0 27 21614.0 28 22278.0 29 23030.0 30 25503.0 31 29249.0 32 33646.0 33 37385.0 34 42029.0 35 44612.0 36 32745.0 37 17685.0 38 3512.0 39 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.06259313721868 2.6555037476569447 36.372100584501474 36.909802530622905 2 37.37582730481518 11.363664353784728 37.255872724988734 14.004635616411361 3 14.323365033855765 11.361201220728741 60.10660439866301 14.208829346752482 4 12.8826785094104 3.157982891077793 66.85608159867188 17.10325700083993 5 19.640776675115212 3.554054686480109 59.46495823757903 17.340210400825644 6 15.112552864993214 11.152327537581252 61.06353159091301 12.671588006512524 7 57.292967508811856 1.2980711205038586 38.7596154556673 2.6493459150169834 8 58.38117969294583 8.186469024870254 30.262545352437392 3.169805929746519 9 54.09680605536631 3.1629091571897625 30.4844736407816 12.255811146662332 10 26.872535327485856 24.607930795813658 35.80385578848584 12.715678088214647 11 24.4101412114181 17.023944116437224 44.3083152908837 14.257599381260977 12 19.627968383224093 15.79533334811213 46.605679492200494 17.971018776463286 13 18.037030742363672 16.32466064184321 52.080239022431755 13.558069593361363 14 16.199040855988002 18.435073044210775 47.545118439753 17.82076766004823 15 13.278257678201518 15.956914876584719 53.46895343939584 17.29587400581792 16 15.857404301122942 16.37860325576927 45.721168411796434 22.042824031311348 17 16.399539886745142 16.829849231625644 49.620554352725584 17.150056528903633 18 16.35717399818221 15.346550505311745 48.524706456118054 19.771569040387995 19 16.240914117939738 18.413890099929308 45.64875229995049 19.696443482180463 20 18.278664095155754 17.863872488527957 49.505033412399904 14.35243000391638 21 18.80257249616367 20.906827065891274 45.06228031932057 15.228320118624488 22 17.34513666693761 15.174870131309623 47.96385105927037 19.516142142482394 23 16.36012975784939 21.553645806392815 45.98718678184277 16.099037653915026 24 16.78403495678433 17.33257468835209 45.75195757499625 20.131432779867335 25 15.600006896772555 22.31943387349841 43.79179628904374 18.288762940685295 26 16.18155261129051 17.958210484572167 46.7322845312781 19.12795237285923 27 17.009657944712515 18.89543261237429 44.93518265363177 19.159726789281432 28 13.977048526184335 19.48781611233857 48.27322057110203 18.261914790375062 29 17.88259229975344 18.479902065829695 44.53516984533988 19.102335789076992 30 17.360900718495913 20.545978073189534 46.03275474337848 16.060366464936067 31 19.164899368698997 19.545946052459808 42.261205408054934 19.027949170786258 32 19.325988270560387 22.01720744752911 41.55527147420977 17.10153280770074 33 18.2237362280073 19.981920603369076 40.07345062772946 21.720892540894166 34 19.829206353898034 24.162103712680455 39.17711650865668 16.83157342476483 35 19.797678250781427 23.652727796702848 37.77411591996788 18.77547803254784 36 20.439324411865403 26.761694339966553 35.10334074736383 17.695640500804213 37 20.665686339710383 22.71181096931675 36.31815797057541 20.304344720397452 38 19.25652791838162 27.733400330552456 34.92599516733294 18.084076583732976 39 22.491360560806132 22.367957594701306 34.933877193112096 20.206804651380462 40 20.349912681933166 26.420796725018285 35.823314539628115 17.40597605342043 41 23.885001243882193 23.31798801439455 34.158975533699355 18.6380352080239 42 18.57941264129147 24.70522455152505 37.68150211706286 19.03386069012062 43 21.633451317406717 22.60072366849185 35.005800678346844 20.760024335754593 44 22.309581341274473 22.07164268806637 35.793018003039506 19.825757967619655 45 19.000854707170426 22.848022227312697 35.736119629446264 22.415003436070613 46 21.53541862177853 24.216046326606516 34.396175246990666 19.852359804624285 47 17.495880409963867 23.175126297147447 40.80623271188487 18.522760581003826 48 21.024072199356137 24.221465219329684 34.54174641059936 20.212716170714824 49 18.565865409483557 22.506878299058837 38.00294098086884 20.924315310588764 50 20.13069383995054 21.474086608684516 36.502646636468654 21.89257291489629 51 20.09867311022274 21.008800774409035 35.4112323793619 23.481293736006325 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 65.0 1 412.0 2 759.0 3 17388.5 4 34018.0 5 22883.0 6 11748.0 7 10975.0 8 10202.0 9 9961.5 10 9721.0 11 9110.0 12 8499.0 13 7862.0 14 7225.0 15 6556.5 16 5888.0 17 5360.0 18 4832.0 19 4407.0 20 3982.0 21 3785.0 22 3588.0 23 3501.0 24 3414.0 25 3479.0 26 3912.5 27 4281.0 28 4466.0 29 4651.0 30 5217.0 31 5783.0 32 6343.0 33 6903.0 34 7725.0 35 8547.0 36 8904.5 37 9262.0 38 9886.5 39 10511.0 40 11286.0 41 12061.0 42 13090.0 43 14119.0 44 15525.5 45 16932.0 46 28733.0 47 40534.0 48 34022.5 49 27511.0 50 26365.0 51 25219.0 52 22567.5 53 19916.0 54 18643.5 55 17371.0 56 16946.0 57 16521.0 58 15253.5 59 13986.0 60 12739.5 61 11493.0 62 10255.0 63 9017.0 64 7903.0 65 6789.0 66 6039.5 67 5290.0 68 4608.5 69 3927.0 70 3358.5 71 2790.0 72 2395.0 73 2000.0 74 1647.5 75 1108.0 76 921.0 77 684.5 78 448.0 79 329.0 80 210.0 81 170.5 82 131.0 83 86.5 84 42.0 85 33.5 86 25.0 87 16.5 88 8.0 89 6.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 405987.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.115681570862684 #Duplication Level Percentage of deduplicated Percentage of total 1 79.17107511641892 34.92685939458787 2 6.821482189427234 6.018686722201661 3 3.2650076091559983 4.321141080359091 4 2.1357295545933757 3.7687665980768705 5 1.6190828653379286 3.5713472062043996 6 1.3458882937990304 3.5624867639513815 7 1.0832258387451925 3.345107231998949 8 0.8825647225846958 3.1147955413778563 9 0.7023579054066853 2.7886497933329477 >10 2.8807355191333044 18.38675494754974 >50 0.054684889559347576 1.6258983124229864 >100 0.03189951890961941 2.6640105115913566 >500 0.0028481713312160186 0.979057159999993 >1k 0.0017089027987296113 1.580664665400399 >5k 0.0011392685324864075 3.6201995500410415 >10k+ 5.696342662432038E-4 5.725574520903449 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22784 5.612002354755202 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCG 8114 1.9985861616258649 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC 6292 1.5498033188254796 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTC 3330 0.8202233076428556 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGACAGAGT 1603 0.3948402288743235 No Hit GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 1357 0.3342471556971036 No Hit GAACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCT 905 0.22291354156660187 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTC 828 0.20394741703552086 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTA 820 0.20197691059073322 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGACAGAGTCGTATGCCG 713 0.1756213868916985 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCT 630 0.15517738252702673 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1224177128824322 0.0 2 0.0 0.0 0.0 0.692140388731659 0.0 3 0.0 0.0 0.0 0.8256422003660215 0.0 4 0.0 0.0 0.0 1.2731934766384145 0.0 5 0.0 0.0 0.0 2.446876377815053 0.0 6 0.0 0.0 0.0 2.65624268757374 0.0 7 0.0 0.0 0.0 2.9774352380741256 0.0 8 0.0 0.0 0.0 3.405774076509839 0.0 9 0.0 0.0 0.0 3.531886488976248 0.0 10 0.0 0.0 0.0 6.192809129356359 0.0 11 0.0 0.0 0.0 6.666715929327786 0.0 12 0.0 0.0 0.0 8.840677164539752 0.0 13 0.0 0.0 0.0 9.045117208186468 0.0 14 0.0 0.0 0.0 9.169012800902491 0.0 15 0.0 0.0 0.0 9.53774381938338 0.0 16 0.0 0.0 0.0 9.785781318121023 0.0 17 0.0 0.0 0.0 10.036035636609054 0.0 18 0.0 0.0 0.0 10.261658624537239 0.0 19 2.4631330559845514E-4 0.0 0.0 10.953060073352102 0.0 20 4.926266111969103E-4 0.0 0.0 11.210457477702487 0.0 21 4.926266111969103E-4 0.0 0.0 11.455292903467353 0.0 22 4.926266111969103E-4 0.0 0.0 11.85111838556407 0.0 23 4.926266111969103E-4 0.0 0.0 12.12551140800075 0.0 24 4.926266111969103E-4 0.0 0.0 12.349656516095344 0.0 25 4.926266111969103E-4 0.0 0.0 12.535130435210979 0.0 26 4.926266111969103E-4 0.0 0.0 12.724299053910594 0.0 27 4.926266111969103E-4 0.0 0.0 12.927507531029319 0.0 28 4.926266111969103E-4 0.0 0.0 13.12037084931291 0.0 29 4.926266111969103E-4 0.0 0.0 13.31939200023646 0.0 30 4.926266111969103E-4 0.0 0.0 13.556591713527773 0.0 31 4.926266111969103E-4 0.0 0.0 13.76448014345287 0.0 32 4.926266111969103E-4 0.0 0.0 13.952663508930089 0.0 33 4.926266111969103E-4 0.0 0.0 14.157842492493602 0.0 34 4.926266111969103E-4 0.0 0.0 14.37188875505866 0.0 35 4.926266111969103E-4 0.0 0.0 14.614014734461941 0.0 36 4.926266111969103E-4 0.0 0.0 14.830524130082983 0.0 37 4.926266111969103E-4 0.0 0.0 15.044324079342442 0.0 38 4.926266111969103E-4 0.0 0.0 15.287188998662518 0.0 39 4.926266111969103E-4 0.0 0.0 15.628086613610781 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGAA 25 3.8863327E-5 45.0 9 TTCGTCG 20 7.027891E-4 45.0 1 CGTTCGG 20 7.027891E-4 45.0 2 GAACGGT 25 3.8863327E-5 45.0 18 GCTACGA 20 7.027891E-4 45.0 10 CCCGACA 20 7.027891E-4 45.0 41 TCGTTCA 30 2.1620199E-6 44.999996 16 CGTTTTT 10250 0.0 44.42927 1 TACGGCT 975 0.0 43.846153 7 TGATACC 1045 0.0 43.27751 4 ACGGCTG 995 0.0 42.738693 8 AATGATC 190 0.0 42.63158 2 AATGATA 2995 0.0 42.29549 2 GAATGAT 3180 0.0 42.099056 1 ATGATAC 3040 0.0 42.039474 3 GCGATTG 145 0.0 41.89655 9 GATACCT 1080 0.0 41.875 5 ACCGGTG 70 0.0 41.785713 17 ATACGGC 1990 0.0 41.60804 6 CGACCAC 655 0.0 41.564884 12 >>END_MODULE