##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933489.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 485433 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.08897005353983 31.0 25.0 31.0 16.0 33.0 2 28.07235190026224 31.0 28.0 33.0 16.0 34.0 3 28.176467195266905 31.0 28.0 33.0 16.0 34.0 4 31.73874664474809 35.0 28.0 37.0 19.0 37.0 5 33.719689431909245 35.0 33.0 37.0 30.0 37.0 6 32.28818395123529 35.0 32.0 37.0 17.0 37.0 7 32.68704435009569 35.0 32.0 35.0 27.0 37.0 8 32.7205834790795 35.0 32.0 37.0 25.0 37.0 9 33.371451879044066 35.0 32.0 38.0 26.0 39.0 10 32.4241223814615 35.0 29.0 39.0 17.0 39.0 11 32.947943382505926 37.0 31.0 39.0 17.0 39.0 12 33.53192716605587 37.0 31.0 39.0 23.0 39.0 13 33.32241730578679 35.0 32.0 39.0 22.0 39.0 14 33.613594461027574 36.0 31.0 40.0 21.0 41.0 15 34.089833200462266 37.0 32.0 40.0 23.0 41.0 16 34.131898737827875 37.0 32.0 40.0 24.0 41.0 17 32.288787536076036 35.0 27.0 39.0 18.0 41.0 18 33.07174419538845 36.0 30.0 39.0 23.0 39.0 19 32.781374566624024 36.0 30.0 37.0 21.0 39.0 20 32.223829035108864 34.0 30.0 36.0 24.0 39.0 21 32.60850416020337 35.0 31.0 37.0 24.0 39.0 22 32.78572120148404 34.0 30.0 37.0 25.0 39.0 23 33.85931735172516 35.0 32.0 38.0 27.0 40.0 24 32.213108709131845 34.0 31.0 37.0 21.0 39.0 25 31.390542052147257 34.0 29.0 37.0 18.0 39.0 26 30.517564730869143 33.0 25.0 37.0 19.0 39.0 27 32.52412382347306 34.0 31.0 37.0 22.0 39.0 28 32.2776881670591 35.0 31.0 37.0 21.0 39.0 29 32.31985464523426 35.0 31.0 37.0 21.0 39.0 30 31.384909966977936 34.0 29.0 37.0 18.0 39.0 31 31.48885634062785 34.0 30.0 37.0 20.0 39.0 32 31.49232952848282 35.0 30.0 37.0 18.0 39.0 33 31.30358257473225 35.0 30.0 37.0 15.0 40.0 34 30.402504568086638 35.0 27.0 37.0 10.0 39.0 35 29.82446805223378 34.0 25.0 37.0 9.0 39.0 36 29.108630851219427 34.0 23.0 37.0 7.0 39.0 37 29.12214867963241 34.0 23.0 37.0 7.0 40.0 38 28.891021005988467 34.0 23.0 37.0 7.0 40.0 39 28.508218435911857 33.0 22.0 37.0 7.0 39.0 40 28.208432471628424 33.0 21.0 37.0 7.0 39.0 41 27.814561432782693 33.0 20.0 37.0 7.0 39.0 42 28.258723654963713 33.0 21.0 37.0 7.0 39.0 43 28.279319700143994 33.0 21.0 37.0 7.0 40.0 44 28.310335308889176 34.0 20.0 37.0 7.0 40.0 45 28.600387695109315 34.0 20.0 38.0 7.0 40.0 46 28.30308611075061 34.0 20.0 37.0 7.0 40.0 47 28.36478566558104 34.0 20.0 37.0 7.0 40.0 48 28.17888565466295 34.0 20.0 37.0 7.0 40.0 49 28.10726094023274 34.0 20.0 37.0 7.0 39.0 50 28.279490681515266 34.0 20.0 37.0 7.0 40.0 51 26.563066375792335 31.0 18.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 13.0 10 23.0 11 24.0 12 30.0 13 57.0 14 109.0 15 190.0 16 454.0 17 768.0 18 1403.0 19 2477.0 20 3984.0 21 5923.0 22 8331.0 23 11878.0 24 16294.0 25 22141.0 26 26955.0 27 28136.0 28 27799.0 29 29218.0 30 32610.0 31 36903.0 32 41756.0 33 46027.0 34 48736.0 35 48691.0 36 28972.0 37 12920.0 38 2541.0 39 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.335457210366826 2.20318766956511 29.12121755216477 42.3401375679033 2 43.45522451090058 15.77272249723443 28.610745458178577 12.16130753368642 3 10.615677137730644 15.721634087505382 61.55761969210993 12.105069082654044 4 10.523182395922817 2.3941512010926327 72.91655079073735 14.16611561224721 5 19.91871174806822 2.6926475950337125 62.04666761427426 15.341973042623803 6 12.189735761680808 13.034136533775001 63.62155024483296 11.154577459711227 7 43.22409065720707 1.0129101235391906 52.241194974383696 3.5218042448700437 8 42.21591857166695 10.268770355538251 41.31610335514891 6.199207717645896 9 38.95614842831039 2.381791101964638 42.34363959598956 16.318420873735406 10 24.695066054429756 15.610393195353428 46.739302849208855 12.955237901007965 11 21.473818220022125 13.677067690082875 52.316385577412326 12.532728512482668 12 18.45898404105201 11.234094097434662 54.206656737387036 16.100265124126295 13 17.444425904295752 13.417917611699245 59.55548963502687 9.582166848978128 14 13.375069268055531 16.654821571669004 54.021049248814975 15.94905991146049 15 9.014426295698891 14.904425533492779 62.55631570165193 13.524832469156403 16 12.661685546718084 14.679677731015403 50.3330016706734 22.325635051593114 17 12.985932147175822 16.08151897378217 55.38581019419776 15.546738684844252 18 12.636553345157827 14.067234819223252 56.21167081759996 17.084541018018964 19 12.345885013997812 17.60325317809049 51.97462883652327 18.076232971388432 20 11.551542643371999 19.20429801847011 58.359856046045486 10.884303292112403 21 13.356529119363536 21.066758955406822 53.174588460199445 12.402123465030188 22 9.979956039247435 14.44565985419203 56.64159626560205 18.932787840958483 23 11.18012166457575 20.308260872252195 54.01940123559791 14.492216227574145 24 13.92777170072904 16.91891568970383 50.11093188967376 19.042380719893373 25 11.421555600875918 22.481784303910118 48.25300298908397 17.84365710612999 26 11.047456600601937 16.456029977360416 52.392194185397365 20.10431923664028 27 12.075198843094721 16.896461509621307 51.12755004295134 19.900789604332626 28 8.398687357472607 17.509110423065593 54.25733314381181 19.834869075649987 29 13.800668681362824 19.13157943526707 48.458386636260826 18.609365247109285 30 12.200241845939605 20.2042300379249 50.40139421918164 17.194133896953854 31 13.543372617848396 17.456786003423748 47.645916120247286 21.353925258480572 32 15.008868371124336 23.948928070403124 45.91385422911092 15.12834932936162 33 12.421487620330716 18.45033197166241 43.67544027703102 25.452740130975847 34 13.849697074570539 21.97275422148886 44.55403732337933 19.623511380561272 35 10.255586249801723 22.47869427912812 42.12836786951031 25.137351601559843 36 14.172707665115475 22.277842668298202 38.29611913487546 25.253330531710866 37 12.34258898756368 24.113935393761857 41.611303722655855 21.932171896018605 38 15.584436987184638 24.307164943462848 38.308891237307726 21.799506832044795 39 15.58526099379317 23.298168851314188 38.990550704216645 22.126019450675994 40 15.710715999942321 22.00777450235151 43.648042057297296 18.63346744040887 41 14.939033811051164 19.80602884435133 38.14882795360019 27.106109390997318 42 14.635593377458886 18.763454482904955 46.62332391905783 19.977628220578328 43 16.536370621692388 19.581281041873954 39.062651282463285 24.819697053970373 44 18.12175933650988 18.844001128889055 39.46435450412312 23.569885030477945 45 15.379259341659921 17.883827428295977 39.499168783333644 27.23774444671046 46 18.544886729991575 21.417373767337615 38.73243063409368 21.305308868577125 47 11.848391024096014 19.148677572394128 47.772813137961364 21.23011826554849 48 15.410571592784175 21.59577119808501 38.16633809403152 24.827319115099304 49 15.092299040238302 17.703369981027247 45.04679327528206 22.15753770345238 50 16.088935033258966 17.489540266112936 40.01520292192743 26.406321778700665 51 14.87290728071639 17.814816874831337 38.513450877876046 28.79882496657623 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 60.0 1 415.0 2 770.0 3 29474.0 4 58178.0 5 36757.5 6 15337.0 7 14292.0 8 13247.0 9 13161.0 10 13075.0 11 12333.0 12 11591.0 13 10859.0 14 10127.0 15 9258.0 16 8389.0 17 7838.5 18 7288.0 19 6777.5 20 6267.0 21 5831.5 22 5396.0 23 5318.5 24 5241.0 25 5195.5 26 5330.5 27 5511.0 28 5715.5 29 5920.0 30 6161.0 31 6402.0 32 6670.5 33 6939.0 34 7248.0 35 7557.0 36 7682.0 37 7807.0 38 8213.0 39 8619.0 40 9791.0 41 10963.0 42 13601.5 43 16240.0 44 18022.5 45 19805.0 46 43600.5 47 67396.0 48 56509.5 49 45623.0 50 41229.0 51 36835.0 52 29300.0 53 21765.0 54 19052.5 55 16340.0 56 14371.5 57 12403.0 58 10960.5 59 9518.0 60 8035.5 61 6553.0 62 5541.5 63 4530.0 64 3733.0 65 2936.0 66 2458.0 67 1980.0 68 1670.5 69 1361.0 70 1128.5 71 896.0 72 734.0 73 572.0 74 494.5 75 314.5 76 212.0 77 161.5 78 111.0 79 86.0 80 61.0 81 45.0 82 29.0 83 19.0 84 9.0 85 6.0 86 3.0 87 2.0 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 485433.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.16727282809208 #Duplication Level Percentage of deduplicated Percentage of total 1 83.33678355320265 37.64095239363161 2 7.286999956984228 6.582678303108038 3 2.829466029844329 3.83397792383392 4 1.6365427445948242 2.9567269055979617 5 1.0957376661803824 2.4745741058193107 6 0.8102653832320095 2.195848657655925 7 0.6318834677550453 1.9978317088557143 8 0.4452771532191851 1.6089563730853673 9 0.357377549210409 1.45275923410393 >10 1.4201627902705782 10.291124040829693 >50 0.08310920275044517 2.6270420934288863 >100 0.05617996387039187 5.031371749463425 >500 0.0037143777765548344 1.068893873250045 >1k 0.004642972220693543 4.534358117993421 >5k 4.642972220693543E-4 1.6250458355531876 >10k+ 0.001392891666208063 14.077858683789584 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44460 9.158833453844299 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCG 12496 2.5741966450570932 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGC 10174 2.0958608088036867 No Hit GAATCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTC 7749 1.5963068023805551 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 4182 0.8614989092212519 TruSeq Adapter, Index 13 (96% over 25bp) GAACTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCT 3018 0.6217129861381487 TruSeq Adapter, Index 13 (100% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCAACTCT 2775 0.571654584669769 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCAACTCTCGTA 2212 0.45567565451874925 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTC 2105 0.43363347774049144 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCC 1757 0.3619449027981204 No Hit CTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGCT 1705 0.35123281688719143 TruSeq Adapter, Index 13 (100% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCT 1647 0.3392847210634629 No Hit TCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 1202 0.24761398586416664 TruSeq Adapter, Index 13 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 1019 0.20991568352378187 TruSeq Adapter, Index 13 (96% over 25bp) GAATGATACCTGTCTCTTCTACACATCTGACGCACCAACTCTCGTATGCCG 956 0.1969375794393871 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCAACTCTCGT 848 0.1746894010089961 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGC 706 0.14543716640607457 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTAT 543 0.1118588971083548 No Hit GAATGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTT 517 0.1065028541528903 No Hit CGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 516 0.10629685250075704 No Hit GAATCTTTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTC 510 0.10506084258795755 TruSeq Adapter, Index 13 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 501 0.10320682771875832 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATG 499 0.10279482441449181 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4676237503424778 0.0 2 0.0 0.0 0.0 2.2734342329425483 0.0 3 0.0 0.0 0.0 2.73055189902623 0.0 4 0.0 0.0 0.0 4.258878156202813 0.0 5 0.0 0.0 0.0 7.027540360873695 0.0 6 0.0 0.0 0.0 7.659347427966372 0.0 7 0.0 0.0 0.0 8.554218604833212 0.0 8 0.0 0.0 0.0 9.757474254943524 0.0 9 0.0 0.0 0.0 10.113651111481914 0.0 10 0.0 0.0 0.0 14.111937177736165 0.0 11 0.0 0.0 0.0 15.70247593385699 0.0 12 0.0 0.0 0.0 19.467774131548534 0.0 13 0.0 0.0 0.0 19.977834222230463 0.0 14 2.060016521332501E-4 0.0 0.0 20.25861447408808 0.0 15 2.060016521332501E-4 0.0 0.0 21.09189115696708 0.0 16 2.060016521332501E-4 0.0 0.0 21.643151578075656 0.0 17 2.060016521332501E-4 0.0 0.0 22.20574209005156 0.0 18 2.060016521332501E-4 0.0 0.0 22.74752643516201 0.0 19 2.060016521332501E-4 0.0 0.0 23.913495786236204 0.0 20 2.060016521332501E-4 0.0 0.0 24.504926529510765 0.0 21 2.060016521332501E-4 0.0 0.0 25.14353165112384 0.0 22 2.060016521332501E-4 0.0 0.0 26.081869176590796 0.0 23 2.060016521332501E-4 0.0 0.0 26.694518090035082 0.0 24 2.060016521332501E-4 0.0 0.0 27.114967462039047 0.0 25 4.120033042665002E-4 0.0 0.0 27.532532810913143 0.0 26 4.120033042665002E-4 0.0 0.0 27.90560180292646 0.0 27 4.120033042665002E-4 0.0 0.0 28.339441282319083 0.0 28 4.120033042665002E-4 0.0 0.0 28.69149810581481 0.0 29 4.120033042665002E-4 0.0 0.0 29.13913969590036 0.0 30 4.120033042665002E-4 0.0 0.0 29.65434982788562 0.0 31 6.180049563997503E-4 0.0 0.0 29.997548580339615 0.0 32 6.180049563997503E-4 0.0 0.0 30.355167448442938 0.0 33 6.180049563997503E-4 0.0 0.0 30.71937836941452 0.0 34 6.180049563997503E-4 0.0 0.0 31.16557794793514 0.0 35 6.180049563997503E-4 0.0 0.0 31.645767799057747 0.0 36 6.180049563997503E-4 0.0 0.0 32.03820094637159 0.0 37 6.180049563997503E-4 0.0 0.0 32.39849783595265 0.0 38 6.180049563997503E-4 0.0 0.0 32.84016537812633 0.0 39 6.180049563997503E-4 0.0 0.0 33.76779081768236 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACACGA 20 7.0292555E-4 45.0 25 TTTCGAC 20 7.0292555E-4 45.0 24 CCGTCAG 20 7.0292555E-4 45.0 30 CTACGGG 40 6.8012014E-9 45.0 3 TCGCTCG 25 3.887464E-5 45.0 1 ACGTGAG 20 7.0292555E-4 45.0 44 CCGGTGT 25 3.887464E-5 45.0 18 TCGACGT 20 7.0292555E-4 45.0 26 GCTCCGA 25 3.887464E-5 45.0 9 CCCGCAT 20 7.0292555E-4 45.0 42 CGTTTTT 16355 0.0 44.60104 1 AATGATC 380 0.0 44.407898 2 TACGGCT 1585 0.0 43.438484 7 ACGGCTG 1605 0.0 42.897198 8 GAATGAT 4800 0.0 42.609375 1 TGATACG 3010 0.0 42.533222 4 GATACGG 3010 0.0 42.533222 5 ATACGGC 3000 0.0 42.45 6 AATGATA 4515 0.0 42.15947 2 ACGGCGA 1325 0.0 42.11321 8 >>END_MODULE