SRR2933488.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933488.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	648654
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20346	3.1366491226447386	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG	19991	3.0819204074899713	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC	16549	2.5512831185809386	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	16103	2.4825253524991755	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT	4029	0.6211323756579008	No Hit
GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT	3881	0.5983158972271813	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC	3603	0.5554579174721809	No Hit
GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC	3315	0.5110582837691588	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA	3294	0.5078208104783135	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT	3138	0.4837710088891767	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCACATGTTCGT	1328	0.2047316442972679	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTT	921	0.14198632861278895	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTAT	856	0.13196557795064856	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATG	712	0.10976576109913759	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGACG	20	7.031011E-4	45.0	17
TACGCCT	25	3.88892E-5	45.0	7
CGTACCT	25	3.88892E-5	45.0	19
CGTTTTT	15150	0.0	44.34654	1
GATACCT	2185	0.0	43.3524	5
TGATACC	2195	0.0	43.154896	4
CCGATGA	560	0.0	42.589287	18
TACGGCT	2065	0.0	42.384987	7
ATACCTG	2260	0.0	42.013275	6
GCCGATT	75	0.0	42.0	9
GGCACGT	70	0.0	41.785717	11
CGGCTGT	2130	0.0	41.61972	9
ACGGCTG	2115	0.0	41.595745	8
CGATGAA	590	0.0	41.5678	19
AGGCACG	65	0.0	41.53846	10
ACCGGTG	55	6.002665E-11	40.909092	17
ACACGAC	110	0.0	40.909092	26
AGACACG	110	0.0	40.909092	24
GGCGACT	440	0.0	40.909092	10
CGACCAC	1845	0.0	40.487804	12