##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933488.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 648654 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.328381540852288 31.0 28.0 31.0 25.0 34.0 2 28.474309878610168 31.0 27.0 33.0 16.0 34.0 3 28.512200649344642 31.0 26.0 33.0 16.0 34.0 4 33.0192845492358 35.0 32.0 37.0 28.0 37.0 5 34.18583250854847 35.0 33.0 37.0 30.0 37.0 6 33.47645277759792 35.0 33.0 37.0 28.0 37.0 7 33.49322134759055 35.0 32.0 37.0 29.0 37.0 8 33.37909424747246 35.0 33.0 37.0 28.0 37.0 9 34.596572286611966 37.0 34.0 39.0 28.0 39.0 10 34.59302494087757 37.0 33.0 39.0 27.0 39.0 11 34.74455256577467 37.0 34.0 39.0 27.0 39.0 12 34.78394028249267 37.0 34.0 39.0 27.0 39.0 13 34.82043431475024 37.0 34.0 39.0 27.0 39.0 14 35.57255331810179 38.0 34.0 40.0 27.0 41.0 15 35.88528707138166 38.0 34.0 40.0 27.0 41.0 16 35.88991203322573 38.0 34.0 40.0 27.0 41.0 17 35.165040221751504 37.0 33.0 40.0 27.0 41.0 18 35.019256799464735 37.0 33.0 39.0 27.0 40.0 19 34.37327450381868 37.0 33.0 38.0 27.0 40.0 20 33.67101258914614 35.0 32.0 38.0 25.0 40.0 21 34.14820998560095 35.0 33.0 38.0 27.0 40.0 22 34.74833578456311 35.0 33.0 39.0 28.0 40.0 23 35.05129545181252 35.0 33.0 39.0 29.0 40.0 24 34.59085120881086 35.0 33.0 39.0 27.0 40.0 25 33.57242227751621 35.0 32.0 38.0 24.0 40.0 26 33.64484917999427 35.0 32.0 38.0 24.0 40.0 27 34.33387599552304 35.0 33.0 39.0 27.0 40.0 28 34.00453400426113 35.0 33.0 39.0 25.0 40.0 29 34.009491963357966 35.0 33.0 39.0 24.0 40.0 30 33.340412608262646 35.0 32.0 39.0 21.0 40.0 31 33.35236196801377 35.0 33.0 39.0 22.0 40.0 32 32.81428928211342 35.0 32.0 39.0 18.0 40.0 33 32.261382801925215 35.0 31.0 39.0 15.0 40.0 34 31.942995803617954 35.0 31.0 39.0 10.0 40.0 35 31.516210491263447 35.0 30.0 40.0 10.0 41.0 36 30.887325137900945 35.0 27.0 39.0 8.0 40.0 37 30.945642823446708 35.0 27.0 40.0 8.0 40.0 38 30.48395754901689 35.0 25.0 39.0 8.0 40.0 39 30.275496643819356 35.0 24.0 39.0 7.0 40.0 40 29.957101937242353 35.0 23.0 39.0 7.0 40.0 41 29.411700228473116 35.0 22.0 39.0 7.0 40.0 42 29.81483656926497 35.0 23.0 39.0 7.0 40.0 43 29.63429347541216 35.0 23.0 39.0 7.0 40.0 44 29.846943054386468 35.0 23.0 39.0 7.0 40.0 45 29.91531849028912 35.0 23.0 39.0 7.0 40.0 46 29.770056147036787 35.0 23.0 39.0 7.0 40.0 47 29.691501170115348 35.0 23.0 39.0 7.0 40.0 48 29.56061012496647 35.0 23.0 38.0 7.0 40.0 49 29.78486835816938 35.0 23.0 39.0 7.0 40.0 50 29.679619643137944 35.0 23.0 39.0 7.0 40.0 51 28.6366383310671 34.0 22.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 32.0 10 33.0 11 37.0 12 69.0 13 73.0 14 123.0 15 200.0 16 324.0 17 726.0 18 1420.0 19 2490.0 20 3962.0 21 5727.0 22 8264.0 23 11512.0 24 16708.0 25 23482.0 26 29715.0 27 31799.0 28 30614.0 29 29298.0 30 30496.0 31 33630.0 32 39482.0 33 45973.0 34 51601.0 35 59696.0 36 65365.0 37 66457.0 38 51560.0 39 7771.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.720858886247523 2.4432131768246244 32.25910886235189 36.576819074575965 2 35.5869230745513 17.890277405211407 33.14602237864871 13.37677714158858 3 12.53996737860246 18.03488454553583 55.93151356501309 13.493634510848619 4 11.263323744245776 2.7879269996022535 70.30342833004961 15.645320926102361 5 23.06190973924465 3.3117810111399915 56.482500686036005 17.14380856357935 6 14.00191781751134 16.135566881573226 59.1164164562309 10.746098844684532 7 53.41615098342105 1.2034150718256575 42.83100081090998 2.5494331338433125 8 52.373530418374045 12.199724352274094 32.02816910093825 3.398576128413607 9 49.152398659377724 3.1602364280494686 31.227279874941033 16.46008503763177 10 28.995427454390168 21.83968648925313 37.00832801462721 12.156558041729488 11 26.613726270091604 15.20271207762536 44.80123455648158 13.382327095801461 12 20.46391450603866 13.64009163591067 46.95461679107814 18.94137706697253 13 19.205154057479028 14.686103839643321 54.15737820162983 11.951363901247815 14 15.764336610889625 20.63904639453391 46.92917950093579 16.667437493640676 15 12.220074184387979 15.062421568355393 57.00527553981013 15.712228707446496 16 15.513201182756909 16.996118115358883 45.01937859012663 22.471302111757577 17 16.098875517610313 17.6969540001295 50.16079450677865 16.043375975481535 18 16.29358641124544 16.086079789841733 48.621915535863494 18.99841826304933 19 15.664745765847432 18.98716418922877 45.466920731237295 19.881169313686495 20 16.976693275613812 19.1175881132314 51.253364659741564 12.652353951413234 21 16.88465653491692 23.18462539350717 46.76021422823261 13.170503843343292 22 14.731890961899563 14.283732159209686 50.827714004692794 20.156662874197956 23 15.151220835761439 22.127821612138366 48.562716024259466 14.158241527840728 24 16.552892605302674 18.46315601229623 45.21979360336944 19.764157779031656 25 14.794790442978844 25.87897399846451 42.97884542452525 16.347390134031397 26 15.26206575462419 16.205095474629 47.822105467629896 20.710733303116914 27 17.181116589121473 18.486743317700963 44.86613818769328 19.46600190548428 28 13.285973724050109 19.674587684651602 48.72875215446139 18.310686436836896 29 20.644596348746788 16.70135388049715 43.754605691169715 18.899444079586345 30 15.846969262503585 21.97041874404536 45.3244719064401 16.85814008701095 31 18.78628667980156 19.37165268386536 42.34245067478194 19.49960996155115 32 21.57930113743228 21.380890274321903 39.6561186703543 17.38368991789151 33 17.072738316575556 20.43893971208071 39.43119135933795 23.057130612005786 34 22.581222038251518 20.46545615998668 41.183897732843704 15.769424068918097 35 18.78289504111591 22.068622100534338 36.716184591477116 22.432298266872632 36 21.63834648364151 24.992368812957295 36.49865721941127 16.870627483989924 37 18.047063611725203 21.79189521686446 36.87543744430775 23.285603727102586 38 20.159592016699197 28.454306918634586 32.98322372173763 18.402877342928587 39 20.52835564106596 21.25416631979453 37.43320784270197 20.784270196437546 40 22.58060537667231 24.18700879051081 34.90212039084011 18.33026544197677 41 18.657866905931357 23.72435844070953 38.81992556894739 18.79784908441172 42 20.784116031042743 21.79204938225926 38.69782657626408 18.726008010433915 43 21.112334156576544 21.38551523616597 36.47537824479615 21.026772362461344 44 21.65268386535811 21.49404767410669 35.21106784202364 21.642200618511566 45 18.633971269737025 21.76692042290651 34.949603332439175 24.649504974917292 46 22.95245230893512 23.531805862601633 33.33764996438779 20.178091864075455 47 15.88088564936006 22.132600739377235 42.58063620975127 19.405877401511436 48 19.55464700749552 24.979110589004307 33.64135579214805 21.824886611352124 49 19.209316523138682 20.777024422881844 38.84104622803529 21.17261282594419 50 19.17401264772899 20.585551002537564 36.94727851828556 23.293157831447893 51 19.085984207296956 21.17122533739097 34.394916241941004 25.347874213371075 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 74.0 1 945.5 2 1817.0 3 21097.0 4 40377.0 5 29632.5 6 18888.0 7 17936.0 8 16984.0 9 16299.5 10 15615.0 11 14844.5 12 14074.0 13 13101.5 14 12129.0 15 11185.0 16 10241.0 17 9453.5 18 8666.0 19 8134.5 20 7603.0 21 7306.5 22 7010.0 23 6730.0 24 6450.0 25 6808.5 26 7621.0 27 8075.0 28 8741.0 29 9407.0 30 10226.0 31 11045.0 32 12118.0 33 13191.0 34 14149.5 35 15108.0 36 15633.5 37 16159.0 38 16730.0 39 17301.0 40 17772.0 41 18243.0 42 19151.5 43 20060.0 44 22470.5 45 24881.0 46 61469.0 47 98057.0 48 69207.0 49 40357.0 50 37142.5 51 33928.0 52 30609.5 53 27291.0 54 26663.0 55 26035.0 56 25718.0 57 25401.0 58 23217.0 59 21033.0 60 18479.5 61 15926.0 62 13895.5 63 11865.0 64 10450.5 65 9036.0 66 7801.5 67 6567.0 68 5497.0 69 4427.0 70 3728.5 71 3030.0 72 2610.0 73 2190.0 74 1775.5 75 1089.0 76 817.0 77 596.5 78 376.0 79 287.0 80 198.0 81 154.5 82 111.0 83 85.0 84 59.0 85 36.5 86 14.0 87 8.5 88 3.0 89 4.0 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 648654.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.03075559406533 #Duplication Level Percentage of deduplicated Percentage of total 1 82.89027918438168 34.01050786338205 2 5.570588353571901 4.57130898501111 3 2.2019480566023915 2.710427776238396 4 1.3824491862977524 2.2689173873679027 5 1.1006000673335565 2.2579226184787506 6 0.9140451516046424 2.250237793045828 7 0.7709630874494933 2.2143238609230322 8 0.6929245843584118 2.274497541274344 9 0.594364814841575 2.1948513706328905 >10 3.7555622969865405 24.356851267738445 >50 0.07959165168466995 2.2428175286100047 >100 0.04017847797686701 2.9863935723530655 >500 0.0022959130272495435 0.6548681767669752 >1k 0.0026785651984578005 3.546430682525158 >5k 0.0 0.0 >10k+ 0.0015306086848330288 11.459643575652063 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20346 3.1366491226447386 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG 19991 3.0819204074899713 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC 16549 2.5512831185809386 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC 16103 2.4825253524991755 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT 4029 0.6211323756579008 No Hit GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT 3881 0.5983158972271813 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC 3603 0.5554579174721809 No Hit GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 3315 0.5110582837691588 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA 3294 0.5078208104783135 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT 3138 0.4837710088891767 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCACATGTTCGT 1328 0.2047316442972679 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTT 921 0.14198632861278895 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTAT 856 0.13196557795064856 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATG 712 0.10976576109913759 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07369105871543226 0.0 2 0.0 0.0 0.0 0.6729319483114264 0.0 3 0.0 0.0 0.0 0.761422884927866 0.0 4 0.0 0.0 0.0 1.4883127214200482 0.0 5 0.0 0.0 0.0 4.384001331989011 0.0 6 0.0 0.0 0.0 4.616791078140272 0.0 7 0.0 0.0 0.0 5.232990161164504 0.0 8 0.0 0.0 0.0 5.9549467050230165 0.0 9 0.0 0.0 0.0 6.0653291277013635 0.0 10 0.0 0.0 0.0 9.760981971898731 0.0 11 0.0 0.0 0.0 9.94783043039895 0.0 12 0.0 0.0 0.0 13.162949738997987 0.0 13 0.0 0.0 0.0 13.377085472378186 0.0 14 0.0 0.0 0.0 13.571642200618511 0.0 15 0.0 0.0 0.0 14.249661606958409 0.0 16 0.0 0.0 0.0 14.571867282094923 0.0 17 0.0 0.0 0.0 14.72094521886861 0.0 18 0.0 0.0 0.0 14.831944303126166 0.0 19 0.0 0.0 0.0 15.692187206122217 0.0 20 0.0 0.0 0.0 15.871789891066731 0.0 21 0.0 0.0 0.0 16.00437213059659 0.0 22 1.5416539480215955E-4 0.0 0.0 16.274315736895172 0.0 23 1.5416539480215955E-4 0.0 0.0 16.41352708840152 0.0 24 1.5416539480215955E-4 0.0 0.0 16.533621930952403 0.0 25 1.5416539480215955E-4 0.0 0.0 16.62565867164929 0.0 26 1.5416539480215955E-4 0.0 0.0 16.76117005368039 0.0 27 1.5416539480215955E-4 0.0 0.0 16.949406000733827 0.0 28 1.5416539480215955E-4 0.0 0.0 17.054855130778506 0.0 29 1.5416539480215955E-4 0.0 0.0 17.189904016625196 0.0 30 1.5416539480215955E-4 0.0 0.0 17.349002704061025 0.0 31 1.5416539480215955E-4 0.0 0.0 17.47218085450795 0.0 32 1.5416539480215955E-4 0.0 0.0 17.622183783650453 0.0 33 1.5416539480215955E-4 0.0 0.0 17.755382684759518 0.0 34 1.5416539480215955E-4 0.0 0.0 17.96335180234763 0.0 35 1.5416539480215955E-4 0.0 0.0 18.154825222691912 0.0 36 1.5416539480215955E-4 0.0 0.0 18.31376974473294 0.0 37 1.5416539480215955E-4 0.0 0.0 18.48103919809328 0.0 38 1.5416539480215955E-4 0.0 0.0 18.693479112130657 0.0 39 1.5416539480215955E-4 0.0 0.0 19.097854942696724 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGACG 20 7.031011E-4 45.0 17 TACGCCT 25 3.88892E-5 45.0 7 CGTACCT 25 3.88892E-5 45.0 19 CGTTTTT 15150 0.0 44.34654 1 GATACCT 2185 0.0 43.3524 5 TGATACC 2195 0.0 43.154896 4 CCGATGA 560 0.0 42.589287 18 TACGGCT 2065 0.0 42.384987 7 ATACCTG 2260 0.0 42.013275 6 GCCGATT 75 0.0 42.0 9 GGCACGT 70 0.0 41.785717 11 CGGCTGT 2130 0.0 41.61972 9 ACGGCTG 2115 0.0 41.595745 8 CGATGAA 590 0.0 41.5678 19 AGGCACG 65 0.0 41.53846 10 ACCGGTG 55 6.002665E-11 40.909092 17 ACACGAC 110 0.0 40.909092 26 AGACACG 110 0.0 40.909092 24 GGCGACT 440 0.0 40.909092 10 CGACCAC 1845 0.0 40.487804 12 >>END_MODULE