SRR2933487.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933487.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	432006
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28692	6.641574422577465	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG	9795	2.267329620421939	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC	6985	1.6168756915413214	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	4817	1.1150308097572719	No Hit
GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC	1942	0.4495307935537932	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT	1920	0.44443827169067096	No Hit
GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT	1692	0.3916612269274038	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC	1328	0.30740313791938073	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA	1129	0.26133896288477476	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGCACATGTTCGTATGCCG	860	0.1990713091947797	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT	833	0.19282139599912962	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCACATGTTCGT	560	0.12962782924311236	No Hit
CTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGCT	490	0.11342435058772332	Illumina Single End Adapter 2 (95% over 21bp)
GAATCTTTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	479	0.11087808965616218	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATCCG	90	0.0	45.0	4
ACCGGTC	20	7.028393E-4	45.0	17
ACACGTT	20	7.028393E-4	45.0	38
ATGATCC	105	0.0	45.0	3
GATCCGT	25	3.8867496E-5	45.0	5
AGCTCTA	20	7.028393E-4	45.0	21
GCTAACT	20	7.028393E-4	45.0	40
TATACCG	20	7.028393E-4	45.0	27
ACGGGAA	30	2.1623437E-6	44.999996	5
CGTTTTT	11890	0.0	44.640453	1
CCGATGA	165	0.0	43.636368	18
CGATGAA	160	0.0	43.59375	19
TGATACC	1100	0.0	43.159092	4
TACGGCT	955	0.0	42.64398	7
GATACCT	1130	0.0	42.212387	5
ATGATAC	3395	0.0	41.951397	3
AATGATA	3345	0.0	41.90583	2
GAATGAT	3595	0.0	41.620308	1
ATACGGC	2245	0.0	41.29176	6
GATACGG	2305	0.0	40.8026	5