##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933487.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 432006 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.327252399272233 31.0 27.0 31.0 16.0 33.0 2 28.509735975889225 31.0 28.0 33.0 16.0 34.0 3 28.69692319088161 31.0 30.0 33.0 16.0 34.0 4 31.83554395077846 35.0 28.0 37.0 19.0 37.0 5 33.59265612051684 35.0 33.0 37.0 28.0 37.0 6 32.45806539723986 35.0 32.0 37.0 17.0 37.0 7 32.02288162664407 35.0 31.0 35.0 25.0 37.0 8 32.681972009648014 35.0 32.0 35.0 26.0 37.0 9 32.768822655240896 35.0 31.0 37.0 25.0 39.0 10 31.671620301569885 35.0 28.0 39.0 15.0 39.0 11 32.11492201497202 35.0 27.0 39.0 16.0 39.0 12 32.943227640356845 35.0 31.0 39.0 22.0 39.0 13 32.95703994851923 35.0 31.0 39.0 22.0 39.0 14 33.19619634912478 36.0 31.0 39.0 18.0 41.0 15 33.77101243964204 36.0 31.0 40.0 22.0 41.0 16 34.00351384008555 36.0 32.0 40.0 24.0 41.0 17 32.012057702902275 34.0 27.0 39.0 18.0 41.0 18 32.825921399239824 36.0 30.0 39.0 21.0 39.0 19 32.59824169108762 36.0 30.0 37.0 19.0 39.0 20 32.16698379189178 34.0 30.0 36.0 23.0 39.0 21 32.60200321291834 35.0 31.0 37.0 23.0 39.0 22 32.927433878233174 35.0 31.0 37.0 25.0 39.0 23 33.9277301704143 35.0 32.0 38.0 27.0 40.0 24 32.253130743554486 35.0 31.0 37.0 21.0 39.0 25 31.418265024096886 34.0 29.0 37.0 18.0 39.0 26 30.779102605056412 33.0 25.0 37.0 19.0 39.0 27 32.42771165215298 34.0 30.0 37.0 22.0 39.0 28 32.320389068670345 35.0 31.0 37.0 21.0 39.0 29 32.52771952241404 35.0 31.0 38.0 21.0 40.0 30 31.517094669981436 35.0 29.0 38.0 18.0 40.0 31 31.85196733378703 35.0 30.0 37.0 20.0 40.0 32 31.690381615070162 35.0 30.0 37.0 18.0 40.0 33 31.71196001907381 35.0 30.0 38.0 16.0 40.0 34 31.030981051189105 35.0 30.0 38.0 12.0 40.0 35 30.52227515358583 35.0 28.0 38.0 10.0 40.0 36 29.869011078549836 35.0 25.0 38.0 8.0 40.0 37 30.015092382976164 35.0 25.0 38.0 8.0 40.0 38 29.70817766419911 35.0 24.0 38.0 8.0 40.0 39 29.429408387846465 34.0 23.0 38.0 8.0 40.0 40 29.1127901001375 34.0 23.0 38.0 8.0 40.0 41 28.546508613306298 33.0 22.0 37.0 7.0 40.0 42 29.180631750484945 34.0 23.0 38.0 7.0 40.0 43 29.080415549784032 34.0 23.0 38.0 7.0 40.0 44 29.181284519196492 34.0 23.0 38.0 7.0 40.0 45 29.3885547885909 34.0 23.0 38.0 7.0 40.0 46 29.263413008152664 34.0 23.0 38.0 7.0 40.0 47 29.290917255778854 34.0 23.0 38.0 7.0 40.0 48 29.028606084174758 34.0 23.0 37.0 7.0 40.0 49 28.88273542497095 34.0 23.0 37.0 7.0 40.0 50 28.99179178066971 34.0 23.0 37.0 7.0 40.0 51 27.47604431419934 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 14.0 10 18.0 11 30.0 12 27.0 13 45.0 14 114.0 15 214.0 16 511.0 17 816.0 18 1474.0 19 2418.0 20 3689.0 21 5130.0 22 7082.0 23 9645.0 24 13109.0 25 17715.0 26 22306.0 27 24407.0 28 24339.0 29 25312.0 30 27687.0 31 31588.0 32 35151.0 33 39171.0 34 43198.0 35 44779.0 36 31660.0 37 16774.0 38 3502.0 39 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.418642333671293 2.490706147599802 34.56989023300602 38.520761285722884 2 38.79737781419703 13.223658930663 34.56595510247543 13.413008152664545 3 12.927366749535887 13.141021189520515 60.50170599482415 13.429906066119452 4 11.779003069401814 2.7907019809910047 69.5749596070425 15.855335342564686 5 20.08166553242316 3.205973991101976 60.03226807035087 16.68009240612399 6 14.288921913121577 12.0074721184428 61.899371767984704 11.804234200450919 7 53.22634407855447 1.2020666379633616 42.873710087359896 2.697879196122276 8 53.951565487516376 9.141771179103994 33.05995750059027 3.8467058327893593 9 49.772919820558045 3.036068943486896 33.409952639546674 13.781058596408382 10 27.0637444850303 22.248302106915183 38.635805984176145 12.052147423878372 11 24.49433572681861 15.610894293134816 47.06601297204205 12.828757008004517 12 20.017314574334616 13.819483988648306 48.770155970055974 17.39304546696111 13 18.34997662069508 15.065300018981217 54.512900283792355 12.071823076531345 14 15.433118984458549 17.89211260954709 49.66551390489947 17.00925450109489 15 12.184552992319551 15.270852719638153 56.97467164807897 15.569922639963336 16 15.175020717304852 15.373629069966622 47.4842941996176 21.967056013110927 17 15.942602649037282 16.395837094855164 51.2951209010986 16.366439355008957 18 16.059730651889094 14.712295662560242 50.69836993004727 18.529603755503395 19 15.740059165844919 18.049286352504364 47.28638028175535 18.924274199895372 20 16.30532909265149 18.396966708795713 52.32242144785027 12.975282750702535 21 16.967125456590882 20.837905029096817 48.15673856381624 14.03823095049606 22 14.517853918695572 14.738915663208383 51.60900543048014 19.134224987615912 23 14.750026620000648 20.782813201668496 49.40394346374819 15.063216714582667 24 15.416221071003644 17.76641991083457 47.64956968190256 19.16778933625922 25 14.793081577570682 21.87469618477521 45.48918302060619 17.843039217047913 26 15.06414262764869 16.826618148822007 48.87038605945288 19.238853164076424 27 15.139836020796007 17.984703916149314 47.50489576533659 19.370564297718087 28 13.021578404003648 18.91038550390504 50.3083290509854 17.75970704110591 29 18.554834886552502 16.453012226682038 46.20074721184428 18.791405674921183 30 15.583811335953667 20.405966583797447 47.51160863506526 16.498613445183633 31 17.557163557913547 18.62358393170465 45.20816840506845 18.611084105313353 32 19.988379791021423 20.54022397837067 42.794775998481505 16.676620232126403 33 16.150470132359274 19.061772290199674 43.044078091507984 21.743679485933065 34 20.872858247339156 20.03999944445216 42.909820696934766 16.177321611273918 35 17.03217084947894 21.492062610241526 39.56148757193187 21.914278968347663 36 20.280273885084927 23.41564700490271 38.82353485831215 17.48054425170021 37 17.219205288815434 21.53187687208048 39.207557302444876 22.041360536659212 38 19.057837159669077 26.604491604283275 36.731434285634926 17.606236950412725 39 18.774507761466275 20.96915320620547 40.49087281195168 19.765466220376567 40 21.40826747776651 22.75130438003176 37.909195705615204 17.931232436586527 41 18.11247991926038 21.880714619704356 41.51146048897469 18.495344972060572 42 19.620329347277586 20.79878520205738 40.779989166817124 18.80089628384791 43 19.599959259825095 20.550177543830408 39.32607417489572 20.523789021448778 44 20.135599968518957 20.799479636856898 38.27655171455952 20.78836868006463 45 17.899751392341773 21.276787822391356 37.63211622060805 23.191344564658824 46 20.66429632921765 22.749915510432725 36.63976889209872 19.946019268250904 47 15.73380925264927 21.303870779572506 43.56860784340959 19.39371212436864 48 18.337939750836792 23.556848747471097 36.90851515951167 21.19669634218043 49 18.402985143724855 20.223561709791067 40.40198515761355 20.971467988870526 50 18.208543399860186 19.886066397225967 39.04992060295459 22.85546959995926 51 18.176830877348927 20.30735684226608 37.49392369550423 24.021888584880767 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 442.0 2 793.0 3 20708.0 4 40623.0 5 26885.0 6 13147.0 7 12360.5 8 11574.0 9 11195.5 10 10817.0 11 10103.5 12 9390.0 13 8594.5 14 7799.0 15 7151.0 16 6503.0 17 5942.5 18 5382.0 19 5008.0 20 4634.0 21 4376.0 22 4118.0 23 3956.0 24 3794.0 25 3996.0 26 4392.0 27 4586.0 28 5014.5 29 5443.0 30 6026.0 31 6609.0 32 7298.0 33 7987.0 34 8884.0 35 9781.0 36 10153.0 37 10525.0 38 10745.0 39 10965.0 40 11502.0 41 12039.0 42 13024.5 43 14010.0 44 15780.5 45 17551.0 46 32573.5 47 47596.0 48 39581.5 49 31567.0 50 29211.5 51 26856.0 52 23508.5 53 20161.0 54 18764.0 55 17367.0 56 16565.0 57 15763.0 58 14394.5 59 13026.0 60 11658.5 61 10291.0 62 8966.5 63 7642.0 64 6912.0 65 6182.0 66 5319.0 67 4456.0 68 3755.0 69 3054.0 70 2560.0 71 2066.0 72 1773.5 73 1481.0 74 1194.0 75 758.5 76 610.0 77 446.0 78 282.0 79 223.0 80 164.0 81 131.5 82 99.0 83 75.5 84 52.0 85 30.5 86 9.0 87 8.0 88 7.0 89 6.5 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 432006.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.71556295164936 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68113688874134 35.27021318670411 2 6.862834323694818 6.0002533180844155 3 2.8020471395550857 3.6747920436812813 4 1.9059780694162674 3.332836171121198 5 1.4136532453268187 3.089932371894398 6 1.1406870983829798 2.9919467194497242 7 0.9356302839100639 2.8631123203017967 8 0.7737189008528562 2.7058845853691187 9 0.6126755014361057 2.410510900676708 >10 2.7650258668873278 18.062673215347964 >50 0.0622358294750015 1.8713507722771052 >100 0.03788267881087044 3.400842901578175 >500 0.0016235433776087332 0.5330155865916959 >1k 0.0032470867552174664 3.0348530602744233 >5k 0.0010823622517391555 3.969818705285689 >10k+ 5.411811258695777E-4 6.787964141362157 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28692 6.641574422577465 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG 9795 2.267329620421939 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC 6985 1.6168756915413214 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC 4817 1.1150308097572719 No Hit GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 1942 0.4495307935537932 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACATGTT 1920 0.44443827169067096 No Hit GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT 1692 0.3916612269274038 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTC 1328 0.30740313791938073 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTA 1129 0.26133896288477476 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGCACATGTTCGTATGCCG 860 0.1990713091947797 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCT 833 0.19282139599912962 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCACATGTTCGT 560 0.12962782924311236 No Hit CTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGCT 490 0.11342435058772332 Illumina Single End Adapter 2 (95% over 21bp) GAATCTTTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC 479 0.11087808965616218 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1409702643018847 0.0 2 0.0 0.0 0.0 0.8636454123322361 0.0 3 0.0 0.0 0.0 1.040031851409471 0.0 4 0.0 0.0 0.0 1.7490497817159947 0.0 5 0.0 0.0 0.0 3.306667037031893 0.0 6 0.0 0.0 0.0 3.6136072184182626 0.0 7 0.0 0.0 0.0 4.0274903589302005 0.0 8 0.0 0.0 0.0 4.626787590913089 0.0 9 0.0 0.0 0.0 4.800859247325269 0.0 10 0.0 0.0 0.0 7.804984190034397 0.0 11 0.0 0.0 0.0 8.373726290838553 0.0 12 0.0 0.0 0.0 10.842673481386832 0.0 13 0.0 0.0 0.0 11.103780966005102 0.0 14 0.0 0.0 0.0 11.261649143761892 0.0 15 0.0 0.0 0.0 11.761642199413897 0.0 16 0.0 0.0 0.0 12.07622116359495 0.0 17 0.0 0.0 0.0 12.359550561797754 0.0 18 0.0 0.0 0.0 12.615334046286394 0.0 19 0.0 0.0 0.0 13.406295282935885 0.0 20 0.0 0.0 0.0 13.696569029133855 0.0 21 0.0 0.0 0.0 14.00536103665227 0.0 22 0.0 0.0 0.0 14.469243482729407 0.0 23 0.0 0.0 0.0 14.770396707453138 0.0 24 0.0 0.0 0.0 15.003726800090739 0.0 25 0.0 0.0 0.0 15.227103327268603 0.0 26 0.0 0.0 0.0 15.434739332324089 0.0 27 0.0 0.0 0.0 15.680337773086485 0.0 28 0.0 0.0 0.0 15.90001064800026 0.0 29 2.314782665055578E-4 0.0 0.0 16.159960741286 0.0 30 2.314782665055578E-4 0.0 0.0 16.447919704818915 0.0 31 2.314782665055578E-4 0.0 0.0 16.666203710133654 0.0 32 2.314782665055578E-4 0.0 0.0 16.878700758785758 0.0 33 2.314782665055578E-4 0.0 0.0 17.105086503428193 0.0 34 4.629565330111156E-4 0.0 0.0 17.36573103151345 0.0 35 4.629565330111156E-4 0.0 0.0 17.66595834317116 0.0 36 4.629565330111156E-4 0.0 0.0 17.90461243593839 0.0 37 4.629565330111156E-4 0.0 0.0 18.138405485109004 0.0 38 4.629565330111156E-4 0.0 0.0 18.445577144761877 0.0 39 4.629565330111156E-4 0.0 0.0 19.01455072383254 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 90 0.0 45.0 4 ACCGGTC 20 7.028393E-4 45.0 17 ACACGTT 20 7.028393E-4 45.0 38 ATGATCC 105 0.0 45.0 3 GATCCGT 25 3.8867496E-5 45.0 5 AGCTCTA 20 7.028393E-4 45.0 21 GCTAACT 20 7.028393E-4 45.0 40 TATACCG 20 7.028393E-4 45.0 27 ACGGGAA 30 2.1623437E-6 44.999996 5 CGTTTTT 11890 0.0 44.640453 1 CCGATGA 165 0.0 43.636368 18 CGATGAA 160 0.0 43.59375 19 TGATACC 1100 0.0 43.159092 4 TACGGCT 955 0.0 42.64398 7 GATACCT 1130 0.0 42.212387 5 ATGATAC 3395 0.0 41.951397 3 AATGATA 3345 0.0 41.90583 2 GAATGAT 3595 0.0 41.620308 1 ATACGGC 2245 0.0 41.29176 6 GATACGG 2305 0.0 40.8026 5 >>END_MODULE