##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933486.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1084430 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.28937967411451 31.0 28.0 31.0 25.0 34.0 2 28.25451711959278 31.0 25.0 33.0 16.0 34.0 3 28.138491188919524 31.0 25.0 33.0 16.0 34.0 4 33.08184760657673 35.0 32.0 37.0 28.0 37.0 5 34.27169388526691 35.0 33.0 37.0 30.0 37.0 6 33.558236124046736 35.0 33.0 37.0 28.0 37.0 7 33.97486329223648 35.0 33.0 37.0 30.0 37.0 8 33.51917689477421 35.0 33.0 37.0 28.0 37.0 9 34.99884455428197 37.0 34.0 39.0 29.0 39.0 10 35.07810831496731 37.0 34.0 39.0 28.0 39.0 11 35.559868317918166 37.0 34.0 39.0 30.0 39.0 12 35.68823437197422 37.0 35.0 39.0 30.0 39.0 13 35.74617633226672 37.0 35.0 39.0 30.0 39.0 14 36.64645758601293 38.0 35.0 40.0 31.0 41.0 15 36.77926744925906 39.0 35.0 41.0 30.0 41.0 16 36.86039486181681 38.0 35.0 41.0 31.0 41.0 17 35.992345287386 38.0 34.0 40.0 27.0 41.0 18 35.72640096640632 38.0 34.0 39.0 29.0 40.0 19 34.961210958752524 37.0 34.0 37.0 27.0 40.0 20 33.59165552410022 35.0 32.0 37.0 27.0 39.0 21 34.16738563116107 35.0 33.0 37.0 29.0 39.0 22 34.510508746530434 35.0 33.0 38.0 29.0 40.0 23 34.746311887350956 35.0 33.0 38.0 30.0 40.0 24 34.23405844545061 35.0 33.0 38.0 27.0 40.0 25 33.30596903442361 35.0 33.0 37.0 24.0 40.0 26 33.05795763673082 35.0 31.0 38.0 23.0 40.0 27 33.94957350866354 35.0 33.0 38.0 25.0 40.0 28 33.23413037263816 35.0 33.0 38.0 23.0 40.0 29 32.83571184862093 35.0 32.0 38.0 21.0 40.0 30 32.23078022555628 35.0 31.0 38.0 18.0 40.0 31 31.955366413691987 35.0 31.0 38.0 17.0 40.0 32 31.014698966277216 35.0 30.0 38.0 13.0 40.0 33 29.638239443763084 35.0 23.0 38.0 8.0 40.0 34 28.312494121335632 35.0 18.0 38.0 7.0 40.0 35 27.853827356307 34.0 16.0 38.0 7.0 40.0 36 26.998476619053328 33.0 12.0 38.0 7.0 40.0 37 27.210788155989782 34.0 12.0 38.0 7.0 40.0 38 27.01730217718064 33.0 12.0 38.0 7.0 40.0 39 26.738555738959636 33.0 10.0 38.0 7.0 40.0 40 26.572682423024077 33.0 10.0 38.0 7.0 40.0 41 26.242839095192867 33.0 10.0 38.0 7.0 40.0 42 26.395823612404673 33.0 10.0 38.0 7.0 40.0 43 26.313189417481997 33.0 10.0 38.0 7.0 40.0 44 26.460538716191916 33.0 10.0 38.0 7.0 40.0 45 26.55144453768339 33.0 10.0 39.0 7.0 40.0 46 26.307777357690217 33.0 10.0 38.0 7.0 40.0 47 26.234636629381335 33.0 10.0 38.0 7.0 40.0 48 26.03028411239084 33.0 10.0 38.0 7.0 40.0 49 26.25922835037762 33.0 10.0 38.0 7.0 40.0 50 26.225917763248894 33.0 10.0 38.0 7.0 40.0 51 25.10961150097286 31.0 10.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 29.0 10 45.0 11 53.0 12 86.0 13 127.0 14 186.0 15 298.0 16 589.0 17 1310.0 18 2760.0 19 5303.0 20 8992.0 21 13925.0 22 20395.0 23 30362.0 24 44834.0 25 65020.0 26 80021.0 27 74128.0 28 60116.0 29 51043.0 30 49544.0 31 52437.0 32 58084.0 33 66229.0 34 74882.0 35 84047.0 36 84561.0 37 82499.0 38 63175.0 39 9341.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.63568879503518 1.869922447737521 23.30800512711747 46.18638363010983 2 45.96091956142859 20.978763036802743 22.665271156275647 10.395046245493024 3 7.892810047674816 21.18495430779303 59.898010936621084 11.024224707911069 4 7.143015224588033 1.8210488459374972 78.89250574034286 12.143430189131617 5 20.996468190662377 2.2837804192064035 62.72557933661002 13.994172053521204 6 9.39000212092989 16.069271414475807 66.60420681832852 7.93651964626578 7 38.67856846453898 0.7055319384377046 58.32179117139879 2.2941084256245214 8 36.48534253017714 12.390933485794381 47.45018120118403 3.673542782844444 9 34.051160517506894 1.8512029361046816 45.59445976227142 18.503176784117002 10 21.960200289553036 10.845236668111358 53.81011222485546 13.38445081748015 11 17.891703475558586 12.658539509235267 56.47141816438129 12.978338850824858 12 12.506016985881985 11.138201635882446 59.36298331842534 16.992798059810223 13 12.433997583984214 12.623774701917137 66.43499349888882 8.507234215209834 14 11.678485471630259 19.58761745801942 55.198768016377265 13.535129053973055 15 8.328246175410122 13.755797976817313 66.4231900629824 11.492765784790167 16 8.913715039237204 16.40161190671597 54.30908403493079 20.375589019116035 17 9.601357395129238 16.89717178609961 60.36802744298848 13.133443375782669 18 10.14588309065592 15.78893981169831 58.255212415739145 15.809964681906624 19 9.803030163311602 18.623332073070646 54.30290567394852 17.270732089669227 20 11.948857925361711 16.61720904069419 61.60711157013362 9.82682146381048 21 11.851940650848833 21.779367962892948 56.42992171002278 9.938769676235442 22 10.228046070285773 12.226791955220714 58.92173768707985 18.623424287413666 23 11.134881919533763 20.222789852733694 57.60473244008373 11.037595787648812 24 13.757918906706749 14.800033197163486 54.561659120459595 16.88038877567017 25 9.401713342493291 25.628025783130308 52.68546609739679 12.284794776979611 26 10.703595437234307 14.363767140341007 58.73666350064089 16.195973921783793 27 14.96933873094621 16.337246295288768 53.25129330616084 15.442121667604178 28 9.386774618924228 16.925020517691323 58.60175391680422 15.086450946580232 29 14.267403151886244 17.03115922650609 54.63118873509586 14.070248886511807 30 9.799341589590844 19.4788045332571 58.87636823031455 11.845485646837508 31 12.275388913991682 14.20156211097074 51.49433342862149 22.028715546416088 32 14.090720470662008 18.383943638593546 54.31415582379683 13.211180066947614 33 10.943906015141595 15.124627684590061 50.51317281890025 23.418293481368092 34 14.069603386110677 21.6206670785574 43.57164593380855 20.73808360152338 35 11.620390435528343 18.40072664902299 45.905406526931195 24.07347638851747 36 13.182778049297788 21.499958503545642 38.07502558948019 27.242237857676383 37 13.136486449102295 20.44133784568852 48.730485139658626 17.691690565550566 38 15.655690086035982 21.124277270086587 40.64688361627768 22.573149027599754 39 18.21224053189233 20.841455880047583 39.666368506957575 21.279935081102515 40 15.726510701474508 21.52808387816641 42.49642669420802 20.248978726151066 41 16.123770091199987 24.601311287957728 35.51506321293214 23.759855407910145 42 15.834862554521731 22.353494462528705 42.29272521047924 19.518917772470328 43 18.956133637025903 21.84686886198279 35.9556633438765 23.2413341571148 44 19.550086220410723 21.97274144020361 36.67299871822063 21.804173621165035 45 15.702166114917516 20.90868013610837 37.5885027157124 25.800651033261712 46 21.928939627269624 24.14457364698505 35.01682911760095 18.90965760814437 47 14.947299502964691 20.483018728733068 45.822044760842104 18.747637007460142 48 18.878858017576054 23.102920428243408 33.88701898693323 24.13120256724731 49 15.277795708344478 20.76519461837094 41.33231282793726 22.624696845347327 50 17.228221277537507 20.24104829265144 38.427284379812434 24.103446049998617 51 17.990833894303922 20.861097535110613 35.07031343655192 26.07775513403355 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 1318.0 2 2567.0 3 36369.0 4 70171.0 5 54667.5 6 39164.0 7 38260.0 8 37356.0 9 37641.5 10 37927.0 11 37653.5 12 37380.0 13 36704.0 14 36028.0 15 34660.5 16 33293.0 17 31891.5 18 30490.0 19 28741.5 20 26993.0 21 25395.5 22 23798.0 23 22209.0 24 20620.0 25 19578.0 26 17765.0 27 16994.0 28 16654.0 29 16314.0 30 16405.0 31 16496.0 32 17082.5 33 17669.0 34 19001.0 35 20333.0 36 22003.0 37 23673.0 38 24825.5 39 25978.0 40 27454.5 41 28931.0 42 30661.0 43 32391.0 44 37474.0 45 42557.0 46 119759.5 47 196962.0 48 132029.0 49 67096.0 50 58061.5 51 49027.0 52 40610.0 53 32193.0 54 28554.5 55 24916.0 56 21864.0 57 18812.0 58 16457.5 59 14103.0 60 12062.5 61 10022.0 62 8283.0 63 6544.0 64 5189.5 65 3835.0 66 2984.5 67 2134.0 68 1662.0 69 1190.0 70 961.5 71 733.0 72 588.5 73 444.0 74 382.5 75 250.0 76 179.0 77 142.5 78 106.0 79 72.0 80 38.0 81 35.0 82 32.0 83 20.0 84 8.0 85 4.5 86 1.0 87 2.5 88 4.0 89 2.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1084430.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.718902631609566 #Duplication Level Percentage of deduplicated Percentage of total 1 85.11517652476451 45.72293880206084 2 7.230099207585678 7.76785990698345 3 3.135307753115383 5.052758757292075 4 1.6293558976340765 3.501088432689751 5 0.915543323711228 2.459099133073183 6 0.5836868611273893 1.8813010596151223 7 0.38130440784542047 1.433827805063618 8 0.24208186138205723 1.040349755236923 9 0.1566153001043022 0.7571881851230989 >10 0.527859923338599 4.696321360291549 >50 0.039220699500487184 1.4927706820754982 >100 0.036950704737280626 3.9412518671779426 >500 0.0038345070097530304 1.4088472497118076 >1k 0.0012200704121941462 1.1362909697948096 >5k 8.714788658529615E-4 3.115437189267674 >10k+ 8.714788658529615E-4 14.592668844542686 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 41930 3.8665474027830293 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 39293 3.6233781802421547 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36565 3.37181745248656 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 28021 2.583938105732966 No Hit GAACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCT 10046 0.9263852899680016 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTC 7783 0.7177042317162011 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATCTTCCCT 6821 0.6289940337320067 No Hit GAATGACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 6730 0.6206025285172856 No Hit GCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 6359 0.5863910072572688 TruSeq Adapter, Index 13 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTT 5581 0.5146482483885544 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTA 3949 0.36415444058168805 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCTTCCCTCGTATGCCG 1958 0.18055568363103197 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGT 1829 0.16866003338159216 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATG 1161 0.10706085224495819 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1109 0.1022657064079747 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.221434301891317E-5 0.0 0.0 0.065841040915504 0.0 2 9.221434301891317E-5 0.0 0.0 0.7538522541796151 0.0 3 9.221434301891317E-5 0.0 0.0 0.9062825631898785 0.0 4 9.221434301891317E-5 0.0 0.0 2.0651402119085605 0.0 5 9.221434301891317E-5 0.0 0.0 6.706656953422535 0.0 6 9.221434301891317E-5 0.0 0.0 7.479597576607065 0.0 7 9.221434301891317E-5 0.0 0.0 8.361812196269007 0.0 8 9.221434301891317E-5 0.0 0.0 9.357542672187233 0.0 9 9.221434301891317E-5 0.0 0.0 9.558662154311481 0.0 10 9.221434301891317E-5 0.0 0.0 14.118569202253719 0.0 11 9.221434301891317E-5 0.0 0.0 14.341543483673451 0.0 12 9.221434301891317E-5 0.0 0.0 17.50799959425689 0.0 13 9.221434301891317E-5 0.0 0.0 17.776619975470986 0.0 14 9.221434301891317E-5 0.0 0.0 17.949153011259373 0.0 15 9.221434301891317E-5 0.0 0.0 18.45070682293924 0.0 16 9.221434301891317E-5 0.0 0.0 18.76552659000581 0.0 17 9.221434301891317E-5 0.0 0.0 18.953274992392316 0.0 18 9.221434301891317E-5 0.0 0.0 19.09473179458333 0.0 19 9.221434301891317E-5 0.0 0.0 20.028217588963788 0.0 20 9.221434301891317E-5 0.0 0.0 20.221775494960486 0.0 21 9.221434301891317E-5 0.0 0.0 20.338979924937526 0.0 22 1.8442868603782634E-4 0.0 0.0 20.60815359220973 0.0 23 1.8442868603782634E-4 0.0 0.0 20.7347638851747 0.0 24 1.8442868603782634E-4 0.0 0.0 20.855288031500418 0.0 25 1.8442868603782634E-4 0.0 0.0 20.9468568741182 0.0 26 1.8442868603782634E-4 0.0 0.0 21.0809365288677 0.0 27 1.8442868603782634E-4 0.0 0.0 21.294412732956484 0.0 28 1.8442868603782634E-4 0.0 0.0 21.407283088811635 0.0 29 1.8442868603782634E-4 0.0 0.0 21.522643231928296 0.0 30 1.8442868603782634E-4 0.0 0.0 21.65690731536383 0.0 31 1.8442868603782634E-4 0.0 0.0 21.784993037817102 0.0 32 1.8442868603782634E-4 0.0 0.0 21.92949291332774 0.0 33 1.8442868603782634E-4 0.0 0.0 22.063664782420258 0.0 34 1.8442868603782634E-4 0.0 0.0 22.242007321818836 0.0 35 1.8442868603782634E-4 0.0 0.0 22.37221397416154 0.0 36 1.8442868603782634E-4 0.0 0.0 22.500115267928773 0.0 37 1.8442868603782634E-4 0.0 0.0 22.65143900482281 0.0 38 1.8442868603782634E-4 0.0 0.0 22.79732209547873 0.0 39 1.8442868603782634E-4 0.0 0.0 22.952242191750504 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTC 70 0.0 45.0 17 GCGAATC 20 7.033111E-4 45.0 33 TACGCGG 20 7.033111E-4 45.0 2 CTTACGG 20 7.033111E-4 45.0 2 CTAGCGG 45 3.8562575E-10 45.0 2 ACGGGTA 30 2.1653887E-6 44.999996 5 CGCCGAT 30 2.1653887E-6 44.999996 16 CGTTTTT 39315 0.0 44.610836 1 GATACCT 5215 0.0 43.058483 5 CACCGGT 195 0.0 42.692307 16 TGATACC 5285 0.0 42.57332 4 ACGGCTG 3495 0.0 42.424892 8 CCGATGA 1015 0.0 42.3399 18 ATACCTG 5320 0.0 42.335526 6 TCAAGCG 80 0.0 42.1875 17 TACGGCT 3530 0.0 42.004246 7 CGCTTTT 1045 0.0 41.985645 1 CGGCTGT 3550 0.0 41.95775 9 CGATGAA 1030 0.0 41.941746 19 GAATCTG 4760 0.0 41.596638 1 >>END_MODULE