##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933482.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 703970 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.42458769549839 31.0 28.0 31.0 25.0 34.0 2 28.687756580536103 31.0 28.0 33.0 16.0 34.0 3 28.703404974643806 31.0 28.0 34.0 16.0 34.0 4 33.066639203375146 35.0 32.0 37.0 28.0 37.0 5 34.169977413810244 35.0 33.0 37.0 30.0 37.0 6 33.60908277341364 35.0 33.0 37.0 28.0 37.0 7 33.41039817037658 35.0 32.0 37.0 28.0 37.0 8 33.46779834367942 35.0 33.0 37.0 28.0 37.0 9 34.51994261119082 37.0 34.0 39.0 28.0 39.0 10 34.47439095415998 37.0 32.0 39.0 27.0 39.0 11 34.49350540505988 37.0 33.0 39.0 27.0 39.0 12 34.626469877977755 37.0 33.0 39.0 27.0 39.0 13 34.68188701223063 37.0 33.0 39.0 27.0 39.0 14 35.492212736338196 38.0 34.0 40.0 27.0 41.0 15 35.824499623563504 38.0 34.0 40.0 27.0 41.0 16 35.78273790076282 38.0 34.0 40.0 27.0 41.0 17 35.08832336605253 37.0 33.0 40.0 27.0 41.0 18 34.93072716166882 37.0 33.0 39.0 27.0 40.0 19 34.280841513132664 37.0 32.0 38.0 27.0 40.0 20 33.80090770913533 35.0 32.0 38.0 27.0 40.0 21 34.15887750898476 35.0 33.0 38.0 27.0 40.0 22 34.77740102561189 35.0 33.0 39.0 29.0 40.0 23 35.149639899427534 35.0 33.0 39.0 30.0 40.0 24 34.65225932923278 35.0 33.0 39.0 27.0 40.0 25 33.62701677628308 35.0 32.0 38.0 24.0 40.0 26 33.73490063497024 35.0 32.0 38.0 24.0 40.0 27 34.381862863474296 35.0 33.0 39.0 27.0 40.0 28 34.16160631845107 35.0 33.0 39.0 25.0 40.0 29 34.23271304174894 35.0 33.0 39.0 25.0 40.0 30 33.535250081679614 35.0 33.0 39.0 22.0 40.0 31 33.48447234967399 35.0 33.0 39.0 23.0 40.0 32 32.910065769848146 35.0 32.0 39.0 19.0 40.0 33 32.50749463755558 35.0 31.0 39.0 15.0 40.0 34 32.07261531031152 35.0 31.0 39.0 12.0 40.0 35 31.64725485461028 35.0 30.0 40.0 10.0 41.0 36 31.11446510504709 35.0 29.0 39.0 8.0 41.0 37 31.17874625339148 35.0 29.0 39.0 8.0 40.0 38 30.776308649516313 35.0 26.0 39.0 8.0 40.0 39 30.53601005724676 35.0 26.0 39.0 7.0 40.0 40 30.149905535747262 35.0 24.0 39.0 8.0 40.0 41 29.826158785175505 35.0 23.0 39.0 7.0 40.0 42 30.000474452036308 35.0 23.0 39.0 7.0 40.0 43 29.979036038467548 35.0 23.0 39.0 7.0 40.0 44 30.18193815077347 35.0 24.0 39.0 7.0 40.0 45 30.22306490333395 35.0 24.0 39.0 7.0 40.0 46 30.049591601914855 35.0 23.0 39.0 7.0 40.0 47 30.03115331619245 35.0 23.0 39.0 7.0 40.0 48 29.843875449237892 35.0 23.0 38.0 7.0 40.0 49 30.01755472534341 35.0 24.0 39.0 7.0 40.0 50 30.03448726508232 35.0 24.0 39.0 7.0 40.0 51 28.894104862423113 34.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 15.0 9 36.0 10 47.0 11 43.0 12 63.0 13 96.0 14 106.0 15 222.0 16 388.0 17 676.0 18 1388.0 19 2473.0 20 3921.0 21 5827.0 22 8333.0 23 11913.0 24 17138.0 25 24544.0 26 30950.0 27 33426.0 28 32283.0 29 31788.0 30 33708.0 31 37906.0 32 43804.0 33 50577.0 34 56350.0 35 64409.0 36 70476.0 37 73865.0 38 58316.0 39 8880.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.198886316178246 2.537608136710371 34.63258377487677 35.630921772234615 2 34.45771836868048 15.980794636135062 34.870093896046704 14.691393099137748 3 13.214341520235237 16.239612483486514 55.92766737218916 14.618378624089095 4 11.994971376621162 2.9525405912183755 67.81695242695001 17.23553560521045 5 21.759307925053626 3.515632768441837 56.79432362174525 17.930735684759295 6 14.811852777817236 14.16708098356464 59.279230649033344 11.741835589584783 7 56.40140915095814 1.2335752944017502 39.69558361862011 2.669431936020001 8 55.60322172819865 10.359674417943946 30.797619216727984 3.239484637129423 9 52.27808003181954 3.3265622114578743 29.89630239924997 14.49905535747262 10 29.22922851826072 23.3306817051863 35.73987527877608 11.700214497776894 11 27.583135644984875 15.850249300396325 43.03990226856258 13.526712786056224 12 21.62506925011009 14.768385016406949 45.42949273406538 18.17705299941759 13 20.203843913803148 15.02010028836456 51.79482080202281 12.98123499580948 14 16.535931928917424 20.7785843146725 45.51032004204725 17.175163714362828 15 13.51719533502848 15.540719064732873 54.19918462434479 16.74290097589386 16 17.32786908533034 18.00133528417404 43.58268108015967 21.088114550335952 17 17.30073724732588 18.097504155006604 48.30134806880975 16.300410528857764 18 17.66254243788798 16.684517806156514 47.21294941545804 18.439990340497463 19 16.69147833004247 19.556515192408767 43.69703254400045 20.054973933548304 20 18.731764137676322 19.715896984246488 48.201912013296024 13.35042686478117 21 18.287711124053583 23.333238632328083 44.942256062048095 13.436794181570239 22 16.21915706635226 15.284031989999574 48.77892523829141 19.717885705356764 23 16.56462633350853 21.868403483102973 47.08751793400287 14.479452249385627 24 18.499651973805705 18.08542977683708 44.15486455388724 19.260053695469978 25 16.047842947852892 25.177209256076257 41.80263363495603 16.97231416111482 26 15.876386777845648 15.921417105842577 46.512493430117765 21.689702686194014 27 17.937838260153132 18.23046436637925 43.57671491682884 20.254982456638775 28 13.119735215989317 20.34760003977442 46.69872295694419 19.833941787292073 29 19.04186257937128 17.393354830461526 42.366294018211 21.198488571956194 30 16.63778286006506 21.001889285054762 44.663693055101774 17.696634799778398 31 20.814665397673195 19.213460800886402 40.528289557793656 19.443584243646747 32 24.129721436993055 20.796766907680723 39.37241643820049 15.70109521712573 33 19.301816838785744 21.154168501498642 37.53327556572013 22.010739093995483 34 22.30606417887126 20.45058738298507 38.89171413554555 18.35163430259812 35 17.243064335127915 22.550108669403528 39.380655425657345 20.826171569811216 36 18.41612568717417 26.082361464266945 36.0025285168402 19.49898433171868 37 21.534724491100473 22.682074520221033 36.07525888887311 19.70794209980539 38 19.926275267411963 28.734605167833855 32.658351918405614 18.680767646348567 39 26.440189212608487 21.897666093725583 32.89912922425672 18.763015469409208 40 20.526158785175504 23.49574555733909 37.425884625765306 18.552211031720102 41 21.229029646149694 23.957697060954303 34.56056366038325 20.25270963251275 42 19.014020483827434 22.056621731039673 39.84828898958763 19.081068795545264 43 21.05501654900067 20.994644658153046 35.427361961447225 22.522976831399067 44 22.667443214909728 21.05501654900067 33.664076594173046 22.61346364191656 45 19.479523275139567 21.39508785885762 34.40501725925821 24.720371606744607 46 23.411509013168175 23.666491469806953 32.533914797505574 20.3880847195193 47 16.683949600125008 22.594854894384703 40.7541514553177 19.967044050172593 48 20.580422461184426 24.139380939528674 33.05410741935025 22.226089179936643 49 19.154509425117546 20.682415443839936 39.072119550549026 21.090955580493485 50 19.215875676520305 20.68838160717076 36.77074307143771 23.32499964487123 51 18.91799366450275 20.571757319203943 34.439677827180134 26.070571189113174 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 1041.0 2 2002.0 3 22963.0 4 43924.0 5 31735.5 6 19547.0 7 18241.0 8 16935.0 9 16030.0 10 15125.0 11 14387.5 12 13650.0 13 12728.0 14 11806.0 15 11003.0 16 10200.0 17 9436.5 18 8673.0 19 8110.5 20 7548.0 21 7264.5 22 6981.0 23 6819.5 24 6658.0 25 6890.5 26 7743.5 27 8364.0 28 8817.5 29 9271.0 30 10381.5 31 11492.0 32 12650.5 33 13809.0 34 14737.5 35 15666.0 36 16304.5 37 16943.0 38 17785.0 39 18627.0 40 19548.0 41 20469.0 42 21267.0 43 22065.0 44 24631.5 45 27198.0 46 61849.0 47 96500.0 48 69135.0 49 41770.0 50 39279.0 51 36788.0 52 34426.5 53 32065.0 54 31977.5 55 31890.0 56 30762.0 57 29634.0 58 28679.5 59 27725.0 60 24606.0 61 21487.0 62 19307.0 63 17127.0 64 14714.0 65 12301.0 66 10206.5 67 8112.0 68 6588.5 69 5065.0 70 4258.0 71 3451.0 72 2896.0 73 2341.0 74 1969.5 75 1282.5 76 967.0 77 715.5 78 464.0 79 378.0 80 292.0 81 218.5 82 145.0 83 101.5 84 58.0 85 38.0 86 18.0 87 14.5 88 11.0 89 7.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 703970.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.28992890094977 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28507643502789 34.32245321778725 2 6.397677880867428 5.539100411878599 3 3.2339768584738735 4.199958848119527 4 2.325686805630975 4.027152658465676 5 1.7646909116878828 3.8196672049560343 6 1.4958128028954643 3.8852177931885024 7 1.1692460964192812 3.5431606267192626 8 0.9449293425690811 3.2724739244989394 9 0.746660442046425 2.909058970440732 >10 2.5212077762772904 15.579288175433033 >50 0.061351814519232016 1.8846897003708087 >100 0.048014459852553336 3.6941763586757665 >500 0.0016671687448802815 0.43230798242620083 >1k 0.0026674699918084505 3.0720570250340007 >5k 0.0 0.0 >10k+ 0.0013337349959042252 9.819237102005731 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18980 2.696137619500831 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG 17999 2.556785090273733 No Hit GAATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTC 16712 2.373964799636348 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC 14336 2.0364504169211757 No Hit GAACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCT 3776 0.536386493742631 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTC 3382 0.4804181996391892 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCAGAGTTT 3275 0.4652186882963763 No Hit GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 2912 0.4136539909371138 TruSeq Adapter, Index 14 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCT 2832 0.40228987030697333 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTA 2671 0.37941957753881556 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTT 1376 0.1954628748384164 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGT 1059 0.15043254684148472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05625239711919542 0.0 2 0.0 0.0 0.0 0.5660752588888731 0.0 3 0.0 0.0 0.0 0.6657954174183559 0.0 4 0.0 0.0 0.0 1.352472406494595 0.0 5 0.0 0.0 0.0 4.241231870676307 0.0 6 0.0 0.0 0.0 4.560847763399009 0.0 7 0.0 0.0 0.0 5.111865562452945 0.0 8 0.0 0.0 0.0 5.755927099166158 0.0 9 0.0 0.0 0.0 5.883347301731608 0.0 10 0.0 0.0 0.0 9.005213290339077 0.0 11 0.0 0.0 0.0 9.178658181456596 0.0 12 0.0 0.0 0.0 11.752347401167663 0.0 13 0.0 0.0 0.0 11.94866258505334 0.0 14 0.0 0.0 0.0 12.109322840461951 0.0 15 0.0 0.0 0.0 12.640879582936773 0.0 16 0.0 0.0 0.0 12.88492407346904 0.0 17 0.0 0.0 0.0 13.00751452476668 0.0 18 0.0 0.0 0.0 13.100558262425956 0.0 19 0.0 0.0 0.0 13.786667045470688 0.0 20 0.0 0.0 0.0 13.936247283264912 0.0 21 0.0 0.0 0.0 14.048467974487549 0.0 22 0.0 0.0 0.0 14.253306248845831 0.0 23 0.0 0.0 0.0 14.358140261658878 0.0 24 0.0 0.0 0.0 14.457718368680483 0.0 25 0.0 0.0 0.0 14.54238106737503 0.0 26 0.0 0.0 0.0 14.652897140503146 0.0 27 0.0 0.0 0.0 14.813557395911758 0.0 28 0.0 0.0 0.0 14.909584215236444 0.0 29 0.0 0.0 0.0 15.024787988124494 0.0 30 0.0 0.0 0.0 15.16073128116255 0.0 31 0.0 0.0 0.0 15.263292469849567 0.0 32 0.0 0.0 0.0 15.391564981462277 0.0 33 0.0 0.0 0.0 15.516996462917454 0.0 34 0.0 0.0 0.0 15.67566799721579 0.0 35 0.0 0.0 0.0 15.847976476270295 0.0 36 0.0 0.0 0.0 15.984061820816228 0.0 37 0.0 0.0 0.0 16.126965637740245 0.0 38 0.0 0.0 0.0 16.309501825361878 0.0 39 0.0 0.0 0.0 16.61889000951745 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGAAT 20 7.0314226E-4 45.0 17 CGATGAA 655 0.0 44.312977 19 CGTTTTT 15555 0.0 44.175507 1 CCGATGA 665 0.0 42.63158 18 GATACCT 2195 0.0 42.23235 5 TGATACC 2220 0.0 41.85811 4 ATACCTG 2240 0.0 41.58482 6 TACGGCT 1825 0.0 40.931503 7 CGGCTGT 1820 0.0 40.796703 9 CGACCAC 1695 0.0 40.75221 12 ACGGCTG 1840 0.0 40.597824 8 TGGGACG 140 0.0 40.17857 6 GCGACCA 1745 0.0 40.100285 11 GAATCTG 2100 0.0 40.071426 1 TACCTGT 2345 0.0 39.626865 7 CCGGTGA 80 0.0 39.375 18 ATGATAC 6950 0.0 39.269783 3 AATCTGT 2150 0.0 39.139534 2 CACCGGT 190 0.0 39.078945 16 ACCACCG 1095 0.0 39.041096 14 >>END_MODULE