##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933481.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 514923 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.630401050254115 31.0 28.0 31.0 16.0 33.0 2 28.98181475676946 31.0 30.0 33.0 16.0 34.0 3 29.1781217774308 31.0 30.0 33.0 16.0 34.0 4 32.04458336489145 35.0 30.0 37.0 19.0 37.0 5 33.54485622122142 35.0 33.0 37.0 28.0 37.0 6 32.79630352499306 35.0 33.0 37.0 19.0 37.0 7 31.781971285027083 35.0 30.0 35.0 23.0 37.0 8 32.93097997176277 35.0 32.0 35.0 27.0 37.0 9 32.59089223048883 35.0 31.0 37.0 25.0 39.0 10 31.460581484998727 35.0 27.0 39.0 15.0 39.0 11 31.780456495437182 35.0 27.0 39.0 15.0 39.0 12 32.75808033434125 35.0 31.0 39.0 21.0 39.0 13 32.72778260050532 35.0 31.0 39.0 21.0 39.0 14 33.049337473758214 36.0 31.0 39.0 18.0 41.0 15 33.659116023172395 36.0 31.0 39.0 22.0 41.0 16 33.92053763378214 36.0 32.0 40.0 24.0 41.0 17 31.909262161527064 34.0 27.0 39.0 17.0 41.0 18 32.68331964196589 35.0 30.0 39.0 21.0 39.0 19 32.512222215748764 36.0 30.0 37.0 18.0 39.0 20 32.287081757855056 34.0 30.0 37.0 23.0 39.0 21 32.63309659890896 35.0 31.0 37.0 23.0 39.0 22 32.98156229183781 35.0 31.0 37.0 25.0 39.0 23 34.048488803180284 35.0 32.0 38.0 27.0 40.0 24 32.24893624872068 35.0 30.0 37.0 21.0 39.0 25 31.43962301159591 34.0 29.0 37.0 18.0 39.0 26 30.865447843658178 33.0 26.0 37.0 19.0 39.0 27 32.42216020647747 34.0 30.0 37.0 22.0 39.0 28 32.43481646770488 35.0 31.0 38.0 21.0 39.0 29 32.72208854527764 35.0 31.0 38.0 22.0 40.0 30 31.650722535214 35.0 30.0 38.0 18.0 40.0 31 31.939678359677078 35.0 30.0 37.0 21.0 40.0 32 31.696024454141686 35.0 30.0 37.0 18.0 40.0 33 31.815521932405428 35.0 30.0 38.0 16.0 40.0 34 31.068674345484666 35.0 30.0 38.0 12.0 40.0 35 30.61232844522385 35.0 28.0 38.0 10.0 40.0 36 29.966381381293903 35.0 25.0 38.0 8.0 40.0 37 30.14504110323291 35.0 26.0 38.0 8.0 40.0 38 29.951493718478297 35.0 25.0 38.0 8.0 40.0 39 29.618191457751937 34.0 24.0 38.0 8.0 40.0 40 29.23062283098638 34.0 23.0 38.0 8.0 40.0 41 28.903597236868425 33.0 23.0 38.0 8.0 40.0 42 29.324524249256687 34.0 23.0 38.0 8.0 40.0 43 29.43623415539799 34.0 23.0 38.0 8.0 40.0 44 29.48181378575049 34.0 23.0 38.0 7.0 40.0 45 29.623520409847686 35.0 23.0 38.0 7.0 40.0 46 29.3713370736984 34.0 23.0 38.0 7.0 40.0 47 29.466467801982045 34.0 23.0 38.0 7.0 40.0 48 29.179621030717215 34.0 23.0 38.0 7.0 40.0 49 28.993012547507103 34.0 23.0 37.0 7.0 40.0 50 29.20423441951515 34.0 24.0 38.0 7.0 40.0 51 27.65336759088252 32.0 21.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 8.0 10 30.0 11 35.0 12 63.0 13 94.0 14 121.0 15 258.0 16 492.0 17 930.0 18 1780.0 19 2762.0 20 4169.0 21 5979.0 22 8232.0 23 11332.0 24 15164.0 25 20791.0 26 26164.0 27 28099.0 28 28630.0 29 30032.0 30 33169.0 31 37506.0 32 41984.0 33 46303.0 34 51109.0 35 53789.0 36 39987.0 37 21209.0 38 4610.0 39 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.922501034135202 2.5038695105870197 37.54639043119069 38.027239024087095 2 37.73729276027678 10.384076842557043 37.397436121517195 14.481194275648981 3 13.87527843968904 10.379221747717619 61.07204378130322 14.673456031290117 4 12.677817848493852 2.98996160591001 66.60024896926336 17.73197157633277 5 18.298658245990175 3.5488801238243393 60.75238433707564 17.400077293109845 6 15.237423847837444 9.572499189199162 62.30698570465876 12.88309125830464 7 57.23982032265018 1.2611594354884128 38.66869415427161 2.830326087589795 8 58.46000275769387 6.7771297844532095 31.456353668412557 3.3065137894403627 9 54.026135946539576 3.3902156244720087 31.553649768994585 11.029998659993824 10 27.180180337642717 24.443848886144142 36.95057319249674 11.4253975837164 11 25.03286899206289 16.57917785766027 45.330078477752984 13.057874672523853 12 20.97226187216341 15.231209326442983 47.2571627214166 16.539366079977004 13 19.059742913018063 15.347537398795549 52.12954169846754 13.463177989718853 14 16.05036092775036 17.829073473121223 48.57347603428085 17.54708956484756 15 13.550569696828457 15.845087517939577 53.976031367796736 16.628311417435228 16 16.90932430674101 16.47896870017459 46.48617366091629 20.12553333216811 17 17.222380821986977 16.56927346418785 49.51245137622518 16.695894337599988 18 17.11129625206099 15.564657240014526 48.97683731354008 18.347209194384405 19 16.78153821056741 18.48839535231481 45.85947801904363 18.870588418074156 20 18.08969496410143 18.817959190014818 49.078211693787225 14.014134152096528 21 18.59831469947934 20.3282820926624 46.50190416819602 14.571499039662243 22 16.54091971032562 15.826249749962615 49.16715703124545 18.465673508466317 23 16.09580461544736 20.438395643620503 47.79802028652828 15.667779454403863 24 16.929715705066585 17.740516543250155 46.64483816026862 18.68492959141464 25 16.200674663978887 20.929925445163647 44.680855195825394 18.18854469503207 26 15.880821015957725 16.77998458021879 47.26298883522391 20.07620556859958 27 16.18727460222208 18.014149688400014 46.129032884528364 19.66954282484954 28 13.884211814193579 19.235108938618005 47.92871943960553 18.95195980758288 29 18.16232718289919 17.1078005837766 44.94341872474137 19.786453508582838 30 16.6226795074215 19.23802199552166 46.39217902482507 17.74711947223177 31 19.219572635131854 18.597926291892186 43.52903249612078 18.653468576855182 32 21.222978969671193 19.869378528440173 42.562091807901375 16.345550693987256 33 18.449943001186586 19.88530323951348 41.29530046239923 20.3694532969007 34 20.066301175127155 20.519572829335647 41.077986417386676 18.33613957815052 35 16.72483070284295 22.268960601876397 40.81115040501201 20.19505829026864 36 18.206799851628304 24.05835435589399 38.236979121150156 19.497866671327557 37 20.32381540541013 22.717377161245466 37.92644725522069 19.03236017812372 38 19.57613080013905 26.21013238872608 36.44234186470599 17.771394946428885 39 23.453215335108357 21.787917805186407 36.37611837109626 18.38274848860898 40 20.009205259815545 22.446268665412113 39.35928284423108 18.185243230541264 41 19.84471464665591 22.38859013871977 38.18493250447154 19.58176271015278 42 18.32176849742583 21.530597778697008 41.072548711166526 19.075085012710637 43 19.686632758684308 20.86059469085669 38.22998778458138 21.222784765877616 44 21.113059622506665 21.265509600464537 36.50351605968271 21.11791471734609 45 18.727266018414404 21.619931523742387 37.05155916515673 22.60124329268648 46 21.00566492465864 22.993534955711826 35.73272120297598 20.268078916653558 47 16.801346997512248 22.214389335881286 41.06749941253353 19.916764254072937 48 19.584675767056435 22.90517222963433 36.33688920479373 21.17326279851551 49 18.5078157316725 20.932450094480146 39.52571549532649 21.034018678520866 50 18.48548229541116 20.81126692728816 38.62907658038192 22.074174196918765 51 18.419841413182166 20.423636155308657 37.41472025914554 23.741802172363634 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 525.0 2 959.0 3 23357.5 4 45756.0 5 30522.5 6 15289.0 7 14251.0 8 13213.0 9 12675.5 10 12138.0 11 11386.0 12 10634.0 13 9681.0 14 8728.0 15 7973.0 16 7218.0 17 6604.0 18 5990.0 19 5494.5 20 4999.0 21 4794.0 22 4589.0 23 4518.0 24 4447.0 25 4587.5 26 5185.5 27 5643.0 28 6043.5 29 6444.0 30 7276.0 31 8108.0 32 8967.5 33 9827.0 34 10592.0 35 11357.0 36 11949.0 37 12541.0 38 13343.0 39 14145.0 40 14934.0 41 15723.0 42 16454.0 43 17185.0 44 18820.5 45 20456.0 46 33679.5 47 46903.0 48 40275.0 49 33647.0 50 31783.0 51 29919.0 52 27516.0 53 25113.0 54 23969.5 55 22826.0 56 21510.5 57 20195.0 58 19719.0 59 19243.0 60 17179.5 61 15116.0 62 13846.0 63 12576.0 64 11017.5 65 9459.0 66 7944.5 67 6430.0 68 5436.5 69 4443.0 70 3742.5 71 3042.0 72 2685.5 73 2329.0 74 1924.0 75 1252.5 76 986.0 77 727.0 78 468.0 79 366.5 80 265.0 81 205.0 82 145.0 83 100.0 84 55.0 85 40.5 86 26.0 87 15.0 88 4.0 89 2.0 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 514923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.930708094172175 #Duplication Level Percentage of deduplicated Percentage of total 1 78.3262979866879 35.97582328923708 2 7.554111828497439 6.939314106108982 3 3.665067626204775 5.050174538538361 4 2.4428619198986405 4.488095110289339 5 1.7860057506723859 4.10162543943231 6 1.3788866176773529 3.7999943238899334 7 1.0660433081212308 3.4274886800743323 8 0.8355899945451675 3.0703392100692004 9 0.628794974189854 2.5992898569537037 >10 2.2116467711416012 14.240254385216039 >50 0.06204042806905927 2.014876943079698 >100 0.03791359492849647 3.2682879188974363 >500 0.0012925089180169252 0.4317876143760115 >1k 0.0021541815300282086 2.0481218188779646 >5k 8.616726120112836E-4 2.628521943976426 >10k+ 4.308363060056418E-4 5.9160048209831535 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29896 5.805916612775114 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG 7894 1.5330447464960781 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC 5389 1.0465642435859341 No Hit GAATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTC 4893 0.9502391619717899 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCAGAGTTT 1543 0.2996564534891625 No Hit GAACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCT 1527 0.29654919279193204 No Hit GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 1306 0.25363015441143627 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTC 1081 0.20993430085663295 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTA 832 0.1615775562559839 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCT 685 0.13302959860017907 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCCAGAGTTTCGTATGCCG 665 0.129145522728641 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9420379357690373E-4 0.0 0.0 0.08409024261879931 0.0 2 1.9420379357690373E-4 0.0 0.0 0.522408204721871 0.0 3 1.9420379357690373E-4 0.0 0.0 0.6626233436843956 0.0 4 1.9420379357690373E-4 0.0 0.0 1.2322230702454542 0.0 5 1.9420379357690373E-4 0.0 0.0 2.604272871866279 0.0 6 1.9420379357690373E-4 0.0 0.0 2.9544223116854367 0.0 7 1.9420379357690373E-4 0.0 0.0 3.3430241026328207 0.0 8 1.9420379357690373E-4 0.0 0.0 3.845235112822694 0.0 9 1.9420379357690373E-4 0.0 0.0 4.074589793037017 0.0 10 1.9420379357690373E-4 0.0 0.0 6.296281191556796 0.0 11 1.9420379357690373E-4 0.0 0.0 6.74508615851302 0.0 12 1.9420379357690373E-4 0.0 0.0 8.382806749747049 0.0 13 1.9420379357690373E-4 0.0 0.0 8.569630799168031 0.0 14 1.9420379357690373E-4 0.0 0.0 8.712953198827785 0.0 15 1.9420379357690373E-4 0.0 0.0 9.06213161967906 0.0 16 1.9420379357690373E-4 0.0 0.0 9.266239806728384 0.0 17 1.9420379357690373E-4 0.0 0.0 9.442576851296213 0.0 18 1.9420379357690373E-4 0.0 0.0 9.61658345034112 0.0 19 1.9420379357690373E-4 0.0 0.0 10.162684517879372 0.0 20 1.9420379357690373E-4 0.0 0.0 10.372230411148852 0.0 21 1.9420379357690373E-4 0.0 0.0 10.573425541294524 0.0 22 3.8840758715380746E-4 0.0 0.0 10.863954416485571 0.0 23 3.8840758715380746E-4 0.0 0.0 11.081268461498126 0.0 24 3.8840758715380746E-4 0.0 0.0 11.257605506065955 0.0 25 3.8840758715380746E-4 0.0 0.0 11.419377266115516 0.0 26 3.8840758715380746E-4 0.0 0.0 11.56522431509177 0.0 27 3.8840758715380746E-4 0.0 0.0 11.736317857233024 0.0 28 3.8840758715380746E-4 0.0 0.0 11.901585285566968 0.0 29 3.8840758715380746E-4 0.0 0.0 12.077339718754066 0.0 30 3.8840758715380746E-4 0.0 0.0 12.27911746028047 0.0 31 3.8840758715380746E-4 0.0 0.0 12.44904577966026 0.0 32 3.8840758715380746E-4 0.0 0.0 12.62771326975101 0.0 33 3.8840758715380746E-4 0.0 0.0 12.803467702938109 0.0 34 3.8840758715380746E-4 0.0 0.0 13.005828055845242 0.0 35 3.8840758715380746E-4 0.0 0.0 13.246058148499873 0.0 36 3.8840758715380746E-4 0.0 0.0 13.4375430889667 0.0 37 3.8840758715380746E-4 0.0 0.0 13.612909114566644 0.0 38 3.8840758715380746E-4 0.0 0.0 13.83585506959293 0.0 39 3.8840758715380746E-4 0.0 0.0 14.213775651893584 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 30 2.1631586E-6 45.000004 2 GACACGA 80 0.0 45.000004 25 GGCAACG 30 2.1631586E-6 45.000004 8 CACGCGA 30 2.1631586E-6 45.000004 15 CCGAGAA 20 7.0296536E-4 45.000004 21 CGTTTTT 13550 0.0 44.41882 1 AACACGT 75 0.0 42.0 41 TGATACC 1155 0.0 41.688313 4 GAATGAT 3135 0.0 41.483253 1 AATGATA 3030 0.0 41.435646 2 CGACCAC 670 0.0 41.30597 12 TACGGCT 790 0.0 41.297466 7 ATGATAC 3095 0.0 40.856216 3 GATACCT 1175 0.0 40.78723 5 CGGCGAC 1125 0.0 40.6 9 CGTTCAT 50 1.0786607E-9 40.500004 17 ATACGGC 1940 0.0 40.476807 6 GCGACCA 690 0.0 40.43478 11 ACGGCGA 1130 0.0 40.22124 8 ATACCTG 1175 0.0 40.212765 6 >>END_MODULE