##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933477.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 315942 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.279785530255552 31.0 26.0 31.0 16.0 33.0 2 28.341280994612934 31.0 28.0 33.0 16.0 34.0 3 28.533395370036274 31.0 28.0 33.0 16.0 34.0 4 31.75077071107988 35.0 28.0 37.0 19.0 37.0 5 33.564423216919565 35.0 33.0 37.0 28.0 37.0 6 32.26677681346576 35.0 32.0 37.0 17.0 37.0 7 31.990074127529738 35.0 31.0 35.0 25.0 37.0 8 32.553512986560825 35.0 32.0 35.0 25.0 37.0 9 32.82689227769654 35.0 31.0 37.0 25.0 39.0 10 31.680662906482837 35.0 28.0 39.0 15.0 39.0 11 32.46375917098708 35.0 30.0 39.0 17.0 39.0 12 33.32055883674852 35.0 31.0 39.0 25.0 39.0 13 33.36275962043666 35.0 31.0 39.0 25.0 39.0 14 33.37265700666578 36.0 31.0 39.0 18.0 41.0 15 33.942989536054085 36.0 32.0 40.0 25.0 41.0 16 34.12614973634401 36.0 32.0 40.0 25.0 41.0 17 32.0289072044869 35.0 27.0 39.0 17.0 41.0 18 32.836761177684515 36.0 30.0 39.0 22.0 39.0 19 32.671123180836986 36.0 30.0 37.0 19.0 39.0 20 32.21390001962386 34.0 30.0 36.0 23.0 39.0 21 32.625124231662774 35.0 31.0 37.0 23.0 39.0 22 33.011821790075395 35.0 31.0 37.0 25.0 39.0 23 33.912243386444345 35.0 32.0 38.0 27.0 40.0 24 32.28839470535731 35.0 31.0 37.0 21.0 39.0 25 31.283184888365586 34.0 28.0 37.0 18.0 39.0 26 30.720819011084313 33.0 25.0 37.0 18.0 39.0 27 32.421064625785746 34.0 30.0 37.0 22.0 39.0 28 32.28578979686145 35.0 31.0 37.0 21.0 39.0 29 32.41637389141045 35.0 30.0 38.0 21.0 40.0 30 31.33883117787442 34.0 29.0 38.0 18.0 40.0 31 31.767080666704647 35.0 30.0 37.0 20.0 40.0 32 31.5794639522444 35.0 30.0 37.0 18.0 40.0 33 31.451193573503996 35.0 30.0 38.0 15.0 40.0 34 30.690667907400726 35.0 28.0 38.0 10.0 40.0 35 30.17520937387242 35.0 26.0 38.0 8.0 40.0 36 29.640522627570885 35.0 24.0 38.0 8.0 40.0 37 29.644602490330502 35.0 24.0 38.0 7.0 40.0 38 29.569993859632465 35.0 23.0 38.0 8.0 40.0 39 29.177225566717944 34.0 23.0 38.0 7.0 40.0 40 28.935342562875466 34.0 22.0 38.0 7.0 40.0 41 28.55822904203936 33.0 21.0 38.0 7.0 40.0 42 29.009552386197466 34.0 22.0 38.0 7.0 40.0 43 29.06997170366713 34.0 22.0 38.0 7.0 40.0 44 29.01535408397744 34.0 22.0 38.0 7.0 40.0 45 29.26440929031278 35.0 23.0 38.0 7.0 40.0 46 28.91441467104722 34.0 22.0 38.0 7.0 40.0 47 28.933139626893542 34.0 22.0 38.0 7.0 40.0 48 28.73735369150034 34.0 22.0 38.0 7.0 40.0 49 28.526533351058106 34.0 20.0 37.0 7.0 40.0 50 28.72017332295168 34.0 22.0 38.0 7.0 40.0 51 27.12081647897399 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 18.0 10 14.0 11 27.0 12 29.0 13 53.0 14 84.0 15 169.0 16 384.0 17 763.0 18 1262.0 19 1917.0 20 3011.0 21 4044.0 22 5553.0 23 7509.0 24 10181.0 25 13519.0 26 16801.0 27 17381.0 28 17086.0 29 17591.0 30 19702.0 31 22425.0 32 25738.0 33 28638.0 34 31379.0 35 32497.0 36 23402.0 37 12189.0 38 2546.0 39 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.79600686201898 2.4972938070911748 34.172094878173844 38.534604452716 2 38.954618252717275 14.474175639832628 33.54951225224883 13.021693855201272 3 12.168056162206987 14.29471232061581 59.8540238398187 13.683207677358503 4 11.214400111412855 2.8498901697146946 70.2056073583126 15.730102360559851 5 20.429699121990748 3.1945736875755677 59.78312475074539 16.5926024396883 6 13.107785606218863 13.00428559672345 62.40512499129587 11.482803805761817 7 51.62276620392351 1.3201790201999102 44.17741230985434 2.879642466022245 8 52.132669920428434 10.138253223692956 33.89134714599515 3.83772970988346 9 48.4585778402365 2.680555291794063 33.85020035322939 15.010666514740048 10 27.008438257654888 19.1725063461015 40.40994866146318 13.409106734780435 11 21.74354786638054 17.4418089396155 47.656531895094666 13.158111298909295 12 19.12534579131613 14.758405023706883 49.09255496261972 17.023694222357268 13 16.585955650087676 16.981281374429482 54.23938571003538 12.193377265447456 14 14.646675655658317 19.974868805033836 46.866196960201556 18.51225857910629 15 11.303340486545 17.10915294579385 55.607674826392184 15.979831741268969 16 11.986377246456628 16.393515265460117 48.01577504731881 23.604332440764445 17 12.437092884136963 18.0422356002051 52.19280754062454 17.32786397503339 18 12.61655620335378 16.54575839869343 51.485399218843966 19.352286179108823 19 13.497097568541061 20.241373416639764 46.86271530850599 19.398813706313184 20 16.219116166891393 17.594685100429825 52.913192927815864 13.273005804862917 21 16.01179963411006 22.441777288236448 46.50568775281539 15.040735324838103 22 14.408024257616905 16.68027675965842 49.189091668724004 19.72260731400067 23 14.402010495597292 22.765254382133428 47.500490596375286 15.332244525893993 24 14.808097688816302 17.344322692139695 48.68140354875262 19.16617607029138 25 12.831785580897758 24.035107709642908 45.36022434497471 17.772882364484623 26 13.980414126643497 18.068506244817087 49.44166967354768 18.50940995499174 27 14.921726139607902 20.432547746105296 45.84354090307715 18.80218521120965 28 12.179450658665198 19.323166910382287 50.73272942502105 17.764653005931468 29 16.184616163726254 16.80973089997531 46.665527217020845 20.340125719277587 30 14.96382247374518 22.25566717941901 47.33685296668376 15.443657380152054 31 15.399661963271742 19.262079748814656 43.61401776275392 21.72424052515968 32 17.033189636072443 24.578878401731963 42.699609421982515 15.688322540213075 33 14.581157301023605 22.301561679042354 41.18192579650695 21.935355223427084 34 15.889308797184293 21.343157921390635 40.11938900177881 22.648144279646264 35 17.309506175184055 22.591488311145717 40.67708630065012 19.42191921302011 36 15.376556456564813 23.64896088522577 36.617796937412564 24.356685720796854 37 16.881263016629635 26.580195099100468 39.38222838369067 17.15631350057922 38 15.766501446468023 26.251337270764886 37.49390710953276 20.488254173234328 39 15.92159320381589 26.392502421330498 36.992549265371494 20.69335510948212 40 16.48087307163973 24.824493103164507 41.265801950991005 17.428831874204757 41 15.851960169904602 26.582410695634007 36.836824480442615 20.728804654018777 42 15.540510600046845 23.14665349969298 42.24066442574903 19.072171474511144 43 17.243987820549343 24.982749998417432 36.22785194750936 21.545410233523874 44 19.26777699704376 22.962442473618573 36.72541162618455 21.04436890315311 45 15.507593165834235 22.471213070753493 37.66450804261542 24.356685720796854 46 19.19561185280843 26.750479518392616 35.115305973881284 18.938602654917673 47 15.02047844224573 23.27357552968583 42.430256186262035 19.275689841806408 48 17.533914452652702 23.677447126371295 35.827462002519454 22.961176418456553 49 15.296478467566832 22.15628184920017 40.736590893265216 21.81064878996778 50 17.257597913541094 22.29744699976578 38.14877414208937 22.296180944603755 51 16.999322660488318 21.324800121541294 36.42693912173753 25.248938096232855 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 67.0 1 298.0 2 529.0 3 13378.5 4 26228.0 5 18165.0 6 10102.0 7 9520.5 8 8939.0 9 8610.0 10 8281.0 11 7966.5 12 7652.0 13 7100.0 14 6548.0 15 6085.0 16 5622.0 17 5231.0 18 4840.0 19 4530.5 20 4221.0 21 3916.0 22 3611.0 23 3380.5 24 3150.0 25 3164.0 26 3371.0 27 3564.0 28 3845.5 29 4127.0 30 4579.0 31 5031.0 32 5557.0 33 6083.0 34 6650.5 35 7218.0 36 8249.0 37 9280.0 38 9375.5 39 9471.0 40 10310.0 41 11149.0 42 11796.0 43 12443.0 44 13512.5 45 14582.0 46 26381.5 47 38181.0 48 30807.0 49 23433.0 50 21281.0 51 19129.0 52 16031.0 53 12933.0 54 11624.5 55 10316.0 56 9409.0 57 8502.0 58 7733.5 59 6965.0 60 6498.0 61 6031.0 62 5288.5 63 4546.0 64 3838.5 65 3131.0 66 2643.0 67 2155.0 68 1891.0 69 1627.0 70 1368.0 71 1109.0 72 971.5 73 834.0 74 654.5 75 396.5 76 318.0 77 237.0 78 156.0 79 127.5 80 99.0 81 71.5 82 44.0 83 31.0 84 18.0 85 12.0 86 6.0 87 6.5 88 7.0 89 5.5 90 4.0 91 2.5 92 1.0 93 2.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 315942.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.210216477555605 #Duplication Level Percentage of deduplicated Percentage of total 1 82.9223711771364 39.14783094104827 2 6.530668812077274 6.16628576722778 3 2.629192547598552 3.7237424799991072 4 1.594874905847046 3.0117755823864063 5 1.1315626897849642 2.6710659771336633 6 0.8550585485957006 2.422049950811252 7 0.723601463195645 2.391296720465967 8 0.5993347867602096 2.26357800203833 9 0.476091087132851 2.0228726957919014 >10 2.445439172247506 17.55785383390172 >50 0.05032263638640947 1.6357308554842285 >100 0.03400178134216856 3.066313130663369 >500 0.002720142507373485 1.0347321976890418 >1k 0.002720142507373485 2.6354690073935294 >5k 0.0013600712536867424 4.315504251112659 >10k+ 6.800356268433712E-4 5.933898606852796 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18483 5.850124389919669 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCG 8114 2.5681928961644855 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGC 5328 1.6863854758151813 No Hit GAATCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTC 4108 1.3002386513980415 No Hit GCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGC 1502 0.4754037133397902 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGCAACTAT 1403 0.44406884807971087 No Hit GAACTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCT 1196 0.37855049344499936 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTC 987 0.31239911122927627 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGCAACTATCGTA 919 0.29087617347487826 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCGCAACTATCGTATGCCG 673 0.2130137810104386 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCT 644 0.2038348810857689 No Hit GAATCTTTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTC 380 0.12027524039222388 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGCAACTATCGT 370 0.11711010248716537 No Hit CTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCCGTCTTCTGCT 354 0.11204588183907173 TruSeq Adapter, Index 13 (96% over 25bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1651379050585233E-4 0.0 0.0 0.13705047128903405 0.0 2 3.1651379050585233E-4 0.0 0.0 0.8735780617961525 0.0 3 3.1651379050585233E-4 0.0 0.0 1.0808945945774857 0.0 4 3.1651379050585233E-4 0.0 0.0 1.7658304372321503 0.0 5 3.1651379050585233E-4 0.0 0.0 3.529128764140254 0.0 6 3.1651379050585233E-4 0.0 0.0 3.8399453064170004 0.0 7 3.1651379050585233E-4 0.0 0.0 4.2599591064182665 0.0 8 3.1651379050585233E-4 0.0 0.0 4.871780263466079 0.0 9 3.1651379050585233E-4 0.0 0.0 5.0455463344537925 0.0 10 3.1651379050585233E-4 0.0 0.0 8.351216362496913 0.0 11 3.1651379050585233E-4 0.0 0.0 8.941198067999823 0.0 12 3.1651379050585233E-4 0.0 0.0 11.440390957834033 0.0 13 3.1651379050585233E-4 0.0 0.0 11.70847813839249 0.0 14 3.1651379050585233E-4 0.0 0.0 11.859138702673276 0.0 15 3.1651379050585233E-4 0.0 0.0 12.393413981047154 0.0 16 3.1651379050585233E-4 0.0 0.0 12.720372726639699 0.0 17 3.1651379050585233E-4 0.0 0.0 13.00491862430446 0.0 18 3.1651379050585233E-4 0.0 0.0 13.300859018427433 0.0 19 3.1651379050585233E-4 0.0 0.0 14.09784074292117 3.1651379050585233E-4 20 3.1651379050585233E-4 0.0 0.0 14.386817833653012 3.1651379050585233E-4 21 3.1651379050585233E-4 0.0 0.0 14.735299516999955 3.1651379050585233E-4 22 3.1651379050585233E-4 0.0 0.0 15.21798304752138 3.1651379050585233E-4 23 3.1651379050585233E-4 0.0 0.0 15.568996841192371 3.1651379050585233E-4 24 3.1651379050585233E-4 0.0 0.0 15.843414297560944 3.1651379050585233E-4 25 3.1651379050585233E-4 0.0 0.0 16.096625329965626 3.1651379050585233E-4 26 3.1651379050585233E-4 0.0 0.0 16.31375379025264 3.1651379050585233E-4 27 3.1651379050585233E-4 0.0 0.0 16.539111609092807 3.1651379050585233E-4 28 3.1651379050585233E-4 0.0 0.0 16.757506124541845 3.1651379050585233E-4 29 3.1651379050585233E-4 0.0 0.0 17.002487798393375 3.1651379050585233E-4 30 6.330275810117047E-4 0.0 0.0 17.24810249982592 3.1651379050585233E-4 31 6.330275810117047E-4 0.0 0.0 17.48675389786733 3.1651379050585233E-4 32 6.330275810117047E-4 0.0 0.0 17.71052914775497 3.1651379050585233E-4 33 6.330275810117047E-4 0.0 0.0 17.937469535547663 3.1651379050585233E-4 34 6.330275810117047E-4 0.0 0.0 18.14921726139608 3.1651379050585233E-4 35 6.330275810117047E-4 0.0 0.0 18.394831962828622 3.1651379050585233E-4 36 6.330275810117047E-4 0.0 0.0 18.610694367953613 3.1651379050585233E-4 37 6.330275810117047E-4 0.0 0.0 18.837318241955803 3.1651379050585233E-4 38 6.330275810117047E-4 0.0 0.0 19.09179532952251 3.1651379050585233E-4 39 6.330275810117047E-4 0.0 0.0 19.355134803223375 3.1651379050585233E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACTG 120 0.0 45.000004 11 CGGAATA 20 7.025512E-4 45.0 20 CGGGTGA 20 7.025512E-4 45.0 6 CGGGTCG 25 3.8843624E-5 45.0 6 ACCGGTC 25 3.8843624E-5 45.0 17 GATGTCG 20 7.025512E-4 45.0 10 GGGTCGT 40 6.7884685E-9 45.0 7 AATGGTA 20 7.025512E-4 45.0 34 TACGGGA 25 3.8843624E-5 45.0 4 TCGTCGG 35 1.208191E-7 45.0 2 ATTGCGG 25 3.8843624E-5 45.0 2 TATACGG 45 3.8380676E-10 45.0 27 CGTTTTT 8825 0.0 44.464592 1 GATACCT 1110 0.0 43.378376 5 CACCGGT 125 0.0 43.199997 16 TGATACC 1140 0.0 42.82895 4 TACGGCT 780 0.0 42.692307 7 ACGGCTG 800 0.0 42.1875 8 CTACGGC 80 0.0 42.1875 6 GAATGAT 3055 0.0 41.98036 1 >>END_MODULE