##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933476.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 916782 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.108871029317765 31.0 28.0 31.0 25.0 34.0 2 27.977743891132242 31.0 25.0 33.0 16.0 34.0 3 27.94149863326287 31.0 25.0 33.0 16.0 34.0 4 32.90511266582459 35.0 32.0 37.0 28.0 37.0 5 34.17303132042296 35.0 33.0 37.0 30.0 37.0 6 33.353906381233486 35.0 32.0 37.0 28.0 37.0 7 33.84865867785362 35.0 33.0 37.0 30.0 37.0 8 33.273695382326444 35.0 32.0 37.0 28.0 37.0 9 34.85304467147043 37.0 34.0 39.0 28.0 39.0 10 34.895893462131674 37.0 34.0 39.0 28.0 39.0 11 35.29888566747602 37.0 34.0 39.0 30.0 39.0 12 35.39228518884533 37.0 34.0 39.0 30.0 39.0 13 35.3945299973167 37.0 34.0 39.0 30.0 39.0 14 36.24196155683685 38.0 34.0 40.0 30.0 41.0 15 36.355464003438115 38.0 34.0 41.0 29.0 41.0 16 36.4501179124372 38.0 34.0 41.0 30.0 41.0 17 35.57794764731419 38.0 33.0 40.0 27.0 41.0 18 35.33406305970231 37.0 33.0 39.0 27.0 40.0 19 34.59555052346141 37.0 33.0 37.0 27.0 40.0 20 33.248375295326476 35.0 32.0 37.0 25.0 39.0 21 33.88994221090728 35.0 33.0 37.0 27.0 39.0 22 34.3255681285191 35.0 33.0 38.0 28.0 40.0 23 34.526911523132 35.0 33.0 38.0 28.0 40.0 24 34.02266187599669 35.0 33.0 38.0 26.0 40.0 25 33.160015139913305 35.0 32.0 37.0 23.0 40.0 26 32.99410437814006 35.0 31.0 38.0 23.0 40.0 27 33.78775870381399 35.0 33.0 38.0 25.0 40.0 28 33.38364300346211 35.0 33.0 38.0 23.0 40.0 29 33.1005364415968 35.0 32.0 38.0 22.0 40.0 30 32.43773328882984 35.0 31.0 38.0 20.0 40.0 31 32.40634741956103 35.0 31.0 38.0 19.0 40.0 32 31.509343551684044 35.0 30.0 38.0 15.0 40.0 33 30.588596852905052 35.0 25.0 38.0 10.0 40.0 34 29.563755614748107 35.0 22.0 38.0 7.0 40.0 35 28.54299931717682 35.0 18.0 38.0 7.0 40.0 36 28.06778274442561 34.0 16.0 38.0 7.0 40.0 37 27.762086297505842 34.0 15.0 38.0 7.0 40.0 38 27.645096653293805 34.0 15.0 38.0 7.0 40.0 39 27.405334092510543 34.0 15.0 38.0 7.0 40.0 40 27.01852457836214 33.0 15.0 38.0 7.0 40.0 41 26.718021296229637 33.0 14.0 38.0 7.0 40.0 42 26.57461643007825 33.0 12.0 38.0 7.0 40.0 43 26.710740394117686 33.0 12.0 38.0 7.0 40.0 44 26.908138466941978 33.0 12.0 38.0 7.0 40.0 45 26.94804980900585 33.0 12.0 38.0 7.0 40.0 46 26.74286689747399 33.0 10.0 38.0 7.0 40.0 47 26.6749565327417 33.0 10.0 38.0 7.0 40.0 48 26.507204548082314 33.0 10.0 38.0 7.0 40.0 49 26.508037897777225 33.0 10.0 38.0 7.0 40.0 50 26.494131647436358 33.0 10.0 38.0 7.0 40.0 51 25.339442746476262 31.0 10.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 13.0 9 30.0 10 38.0 11 62.0 12 84.0 13 130.0 14 199.0 15 289.0 16 596.0 17 1268.0 18 2667.0 19 4789.0 20 7743.0 21 11396.0 22 16358.0 23 23670.0 24 34088.0 25 49053.0 26 60931.0 27 60885.0 28 52765.0 29 46477.0 30 45685.0 31 48028.0 32 52760.0 33 59574.0 34 65753.0 35 73280.0 36 73607.0 37 68883.0 38 48949.0 39 6729.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.286589396388674 2.0087654426024946 23.910046226911085 43.79459893409774 2 43.86528095010591 22.063151327142112 23.526748998126052 10.54481872462592 3 8.79151204975665 21.979380048910212 58.32542523740649 10.903682663926647 4 8.46777096408961 2.215793940107899 77.2402817681848 12.07615332761769 5 22.69143591388138 2.768924346245891 60.03793704501179 14.501702694860938 6 10.32273757556322 17.864552314508792 63.38540678154676 8.427303328381228 7 39.34424977802793 1.0007831741897202 57.035042136516644 2.61992491126571 8 37.143290335106926 14.165417732896152 44.72153685390856 3.9697550780883573 9 34.66407499274637 2.385299885905264 43.13239134276196 19.818233778586404 10 25.7303262934918 11.531094633184335 50.136455558682435 12.60212351464143 11 21.44741061670059 12.307942346162992 53.42491453802539 12.819732499111023 12 14.840496432085274 10.569361091295422 56.19722027701242 18.392922199606886 13 15.348250729180984 12.02281458405597 63.445290156220345 9.183644530542702 14 13.249714763160709 19.6259307010827 52.89272695144538 14.23162758431121 15 9.000940245336404 12.8799431053402 64.89078101446145 13.22833563486194 16 10.496279377212904 15.484488133493022 51.9988394187495 22.02039307054458 17 11.35711652279386 16.614527772142125 58.204022330281354 13.824333374782663 18 11.401729091539755 15.09813674352245 55.94296135831637 17.55717280662142 19 11.266582459079693 17.24772083221529 52.96548143397231 18.520215274732706 20 13.204665885674022 16.491488707239014 59.96867303241119 10.335172374675768 21 13.012362808170316 21.96149139053777 54.28215213649482 10.743993664797085 22 10.696108780495255 12.454323928698425 58.21296665946757 18.636600631338748 23 12.364880636836238 20.2626142310822 55.70179170184406 11.670713430237505 24 14.683861594141245 15.474016723714035 52.06843066290568 17.773691019239035 25 10.570342785962202 25.62343065199797 50.23757010936079 13.568656452679045 26 11.984419414866347 13.302617197981636 56.30291606946908 18.41004731768294 27 15.244518326057884 16.661758193332766 51.91626798955477 16.17745549105458 28 10.567397701961863 16.308348113291927 57.407322569596694 15.716931615149512 29 19.848339081700995 12.682295245761807 52.24109984707379 15.228265825463414 30 12.826386207408087 18.73858779949868 57.311661878178235 11.123364114914997 31 17.133517019313206 13.290836861980274 52.79881149499008 16.776834623716432 32 22.610936951205414 18.386377568495018 47.52133004356543 11.481355436734141 33 19.04018621657057 14.805264501266386 45.667017895203 20.48753138696004 34 26.02101699204391 17.05530867752639 43.80637927009911 13.11729506033059 35 15.46725393823177 18.395867283607224 48.87388714001802 17.26299163814298 36 20.34943967049964 18.02609562578672 45.938729163530695 15.685735540182943 37 19.639456272047227 19.68352345486713 46.598755211162526 14.078265061923117 38 20.90213376789684 19.923602339487466 41.84331716809449 17.33094672452121 39 27.179198544474044 19.413012035576614 38.30594405213017 15.101845367819175 40 20.6918329548355 19.60367895530235 44.16447966910345 15.540008420758697 41 20.870283229819083 22.66187599669278 40.46992632926912 15.997914444219019 42 17.04680065708096 20.59464518282427 46.13048685510841 16.228067304986354 43 21.236019031787272 19.393923528167 39.992386412473195 19.377671027572532 44 20.600317196454554 20.141429478327456 38.86038338449053 20.39786994072746 45 16.084303574895667 19.261503825336884 39.856149008161154 24.79804359160629 46 23.994144736698583 22.312829004059854 36.14545224491755 17.547574014324017 47 15.762525878562188 19.0781450770194 47.18940816900856 17.96992087540986 48 19.861755575480323 22.65260443595097 35.33195459771243 22.15368539085628 49 16.15269497001468 19.40930341127989 44.22730812777738 20.21069349092805 50 18.42586350953662 18.68394012971459 40.69407994485058 22.196116415898217 51 18.39564912923683 19.537360026702093 36.597577177562385 25.469413666498685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 43.0 1 1393.5 2 2744.0 3 35881.0 4 69018.0 5 52155.0 6 35292.0 7 33718.5 8 32145.0 9 31732.0 10 31319.0 11 30292.5 12 29266.0 13 28025.5 14 26785.0 15 25513.5 16 24242.0 17 22823.5 18 21405.0 19 19974.0 20 18543.0 21 17308.5 22 16074.0 23 14999.0 24 13924.0 25 13252.5 26 12265.0 27 11949.0 28 11944.5 29 11940.0 30 11889.0 31 11838.0 32 12383.5 33 12929.0 34 14139.0 35 15349.0 36 16088.0 37 16827.0 38 18034.0 39 19241.0 40 20316.0 41 21391.0 42 22744.0 43 24097.0 44 28085.0 45 32073.0 46 97634.0 47 163195.0 48 110465.5 49 57736.0 50 51322.5 51 44909.0 52 37313.5 53 29718.0 54 27406.5 55 25095.0 56 23126.5 57 21158.0 58 19448.0 59 17738.0 60 15659.0 61 13580.0 62 11806.5 63 10033.0 64 8800.5 65 7568.0 66 6484.5 67 5401.0 68 4473.0 69 3545.0 70 2939.5 71 2334.0 72 1885.5 73 1437.0 74 1248.0 75 823.0 76 587.0 77 472.0 78 357.0 79 260.5 80 164.0 81 121.0 82 78.0 83 60.0 84 42.0 85 29.0 86 16.0 87 15.0 88 14.0 89 7.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 916782.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.93933453944277 #Duplication Level Percentage of deduplicated Percentage of total 1 86.04994064655911 42.1122683240115 2 5.799024852800451 5.676008345474883 3 2.4127632211789476 3.542370793372202 4 1.3749544427145575 2.6915742179400333 5 0.9549927409113608 2.336835461510024 6 0.7136320428373935 2.0954806369491092 7 0.5280650412297477 1.8090206197929084 8 0.424593539985501 1.6623460237309362 9 0.3262834981822586 1.43712875450171 >10 1.3066240903929418 9.637095461857013 >50 0.057931270434621776 1.9665570256675886 >100 0.04311125286269084 4.075499923759918 >500 0.004266217730512861 1.3238122189718122 >1k 0.0015717644270310542 1.2428252840185272 >5k 0.0013472266517409036 4.190222257311625 >10k+ 8.981511011606024E-4 14.200954651130177 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37367 4.075887179285806 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 32605 3.556461623373932 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCG 31628 3.449893213435691 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGC 27632 3.014020781385324 No Hit GAACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCT 7945 0.8666182363964388 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTGGGTTT 6862 0.7484876448272326 No Hit GCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGC 6428 0.7011481464513919 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTC 6089 0.6641709806693412 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCT 5432 0.5925072699943934 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTA 5376 0.5863989476233172 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTT 3229 0.3522102310036628 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGT 2249 0.24531458950982896 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTAT 1434 0.1564166835736304 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATG 1253 0.13667371305283044 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGGTTCGTATGC 1091 0.11900320905078852 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1043 0.11376750416129461 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1011 0.11027703423496535 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08300773793551793 0.0 2 0.0 0.0 0.0 0.9011957041041382 0.0 3 0.0 0.0 0.0 1.038632957453353 0.0 4 0.0 0.0 0.0 2.1051896743173404 0.0 5 0.0 0.0 0.0 6.407848321629351 0.0 6 0.0 0.0 0.0 6.93152788776394 0.0 7 0.0 0.0 0.0 7.758660183118779 0.0 8 0.0 0.0 0.0 8.693560737449033 0.0 9 0.0 0.0 0.0 8.875392405173749 0.0 10 0.0 0.0 0.0 13.090898381512726 0.0 11 0.0 0.0 0.0 13.345484531764367 0.0 12 0.0 0.0 0.0 17.283716303330564 0.0 13 0.0 0.0 0.0 17.608330006479186 0.0 14 0.0 0.0 0.0 17.847754427988335 0.0 15 0.0 0.0 0.0 18.66027038052667 0.0 16 0.0 0.0 0.0 19.053384555979502 0.0 17 0.0 0.0 0.0 19.25135964711349 0.0 18 0.0 0.0 0.0 19.412030340909833 0.0 19 0.0 0.0 0.0 20.47280596695834 0.0 20 0.0 0.0 0.0 20.689106025205557 0.0 21 0.0 0.0 0.0 20.833196986851835 0.0 22 0.0 0.0 0.0 21.17002733474261 0.0 23 0.0 0.0 0.0 21.312809370166516 0.0 24 0.0 0.0 0.0 21.457882026479577 0.0 25 0.0 0.0 0.0 21.56674105730697 0.0 26 0.0 0.0 0.0 21.702869384433814 0.0 27 0.0 0.0 0.0 21.905534794531306 0.0 28 0.0 0.0 0.0 22.021701996766954 0.0 29 0.0 0.0 0.0 22.166556498709618 0.0 30 0.0 0.0 0.0 22.31839194050494 0.0 31 0.0 0.0 0.0 22.453320418594608 0.0 32 0.0 0.0 0.0 22.611700491501797 0.0 33 0.0 0.0 0.0 22.7547006812961 0.0 34 0.0 0.0 0.0 22.986489699841403 0.0 35 0.0 0.0 0.0 23.15075994074927 0.0 36 0.0 0.0 0.0 23.31273956076799 0.0 37 0.0 0.0 0.0 23.497189080937453 0.0 38 0.0 0.0 0.0 23.689928467181947 0.0 39 0.0 0.0 0.0 23.95640403062015 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACTT 20 7.0325396E-4 45.0 9 CCGTGCG 20 7.0325396E-4 45.0 1 CTAGCGG 20 7.0325396E-4 45.0 2 CGTTTTT 31265 0.0 44.41708 1 CACCGGT 235 0.0 43.085106 16 GATACCT 3795 0.0 42.450592 5 TGATACC 3820 0.0 42.349476 4 CCGATGA 1235 0.0 42.085022 18 CGATGAA 1240 0.0 41.91532 19 TACGGCT 3915 0.0 41.666668 7 ACGGCTG 3910 0.0 41.662407 8 ATACCTG 3885 0.0 41.58301 6 CGGCTGT 3935 0.0 41.512074 9 GAATCTG 4000 0.0 41.175 1 AATCTGT 4035 0.0 40.92937 2 TACCTGT 3995 0.0 40.719646 7 CGCTTTT 1025 0.0 40.609756 1 CCGGTGA 145 0.0 40.344826 18 GCGACTA 90 0.0 40.0 11 GAATGAC 710 0.0 39.929577 1 >>END_MODULE