##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933475.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 567306 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.08066193553391 31.0 25.0 31.0 16.0 33.0 2 28.06587273887461 31.0 28.0 33.0 16.0 34.0 3 28.1985172023564 31.0 28.0 33.0 16.0 34.0 4 31.677154833546624 35.0 28.0 37.0 19.0 37.0 5 33.60270295043592 35.0 33.0 37.0 28.0 37.0 6 32.25483425170896 35.0 32.0 37.0 17.0 37.0 7 32.56245483037373 35.0 32.0 37.0 26.0 37.0 8 32.55174808657056 35.0 32.0 37.0 23.0 37.0 9 33.29387667325923 35.0 32.0 38.0 25.0 39.0 10 32.39772715254202 35.0 28.0 39.0 17.0 39.0 11 33.15892305034673 37.0 31.0 39.0 17.0 39.0 12 33.80441595893574 37.0 31.0 39.0 25.0 39.0 13 33.92512153934561 37.0 32.0 39.0 26.0 39.0 14 34.21108185000688 37.0 32.0 40.0 23.0 41.0 15 34.5343271532471 37.0 32.0 40.0 25.0 41.0 16 34.69415976562913 37.0 32.0 40.0 25.0 41.0 17 32.75735317447727 36.0 29.0 40.0 18.0 41.0 18 33.2708626385055 36.0 30.0 39.0 23.0 39.0 19 32.935096755542865 36.0 31.0 37.0 23.0 39.0 20 32.00208176892189 34.0 30.0 35.0 23.0 39.0 21 32.49373882878024 35.0 31.0 36.0 24.0 39.0 22 32.491577737587825 34.0 30.0 37.0 24.0 39.0 23 33.414903068185424 35.0 32.0 37.0 26.0 39.0 24 31.869869171135154 34.0 30.0 36.0 21.0 39.0 25 31.164995610834364 34.0 28.0 36.0 18.0 39.0 26 29.934407533147894 33.0 25.0 36.0 18.0 39.0 27 31.94174043637825 34.0 30.0 37.0 22.0 39.0 28 31.864605697806827 35.0 30.0 37.0 21.0 39.0 29 31.67741042752941 34.0 30.0 37.0 20.0 39.0 30 30.900646212097175 34.0 27.0 37.0 18.0 39.0 31 31.30371792295516 34.0 30.0 36.0 18.0 39.0 32 30.87988316710911 35.0 29.0 37.0 15.0 39.0 33 30.408996203107318 35.0 26.0 37.0 12.0 40.0 34 29.068860544397555 34.0 22.0 37.0 8.0 39.0 35 28.27243498217893 34.0 20.0 37.0 7.0 39.0 36 27.620740834752322 33.0 18.0 37.0 7.0 39.0 37 27.357419100097655 33.0 15.0 37.0 7.0 39.0 38 27.44368647608169 33.0 16.0 37.0 7.0 40.0 39 27.17274980345704 33.0 15.0 37.0 7.0 40.0 40 26.702753011602205 33.0 15.0 37.0 7.0 39.0 41 26.333576588296264 32.0 15.0 37.0 7.0 39.0 42 26.419144165582594 32.0 15.0 37.0 7.0 39.0 43 26.532166062054692 33.0 15.0 37.0 7.0 39.0 44 26.61128209467201 33.0 15.0 37.0 7.0 40.0 45 26.782456029021375 33.0 15.0 37.0 7.0 40.0 46 26.492806351422338 33.0 12.0 37.0 7.0 40.0 47 26.5775137227528 33.0 13.0 37.0 7.0 40.0 48 26.374161387328883 32.0 13.0 37.0 7.0 39.0 49 26.16440157516402 32.0 12.0 36.0 7.0 39.0 50 26.2822092486242 32.0 12.0 37.0 7.0 39.0 51 24.7739403426017 29.0 10.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 12.0 10 26.0 11 31.0 12 44.0 13 85.0 14 155.0 15 359.0 16 849.0 17 1535.0 18 2607.0 19 4262.0 20 6534.0 21 9399.0 22 12728.0 23 18001.0 24 23652.0 25 32254.0 26 38637.0 27 38340.0 28 34521.0 29 33667.0 30 35064.0 31 38820.0 32 42337.0 33 45959.0 34 48538.0 35 48588.0 36 31985.0 37 15400.0 38 2857.0 39 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.9249963864299 2.0921689529107748 27.132799582588586 45.85003507807074 2 47.41920586068189 16.131153204796 25.450109817276743 10.999531117245366 3 9.488177456258175 15.798881027170522 63.42555869319203 11.28738282337927 4 9.202441010671489 2.4128071975265555 75.2992212315752 13.085530560226754 5 19.480492009603285 2.873052638258718 63.575213376907705 14.0712419752303 6 11.036195633397144 13.326141447472791 65.62507711887412 10.012585800255946 7 40.554304026398455 1.090064268666293 55.446443365661565 2.90918833927369 8 40.53614804003483 10.623014739840581 44.52676333407368 4.314073886050914 9 37.03204267185611 2.422502141701304 44.22639633636874 16.31905885007386 10 24.28830296171731 12.546315392398458 50.286265260723496 12.87911638516074 11 19.8723440259754 13.022249015522485 55.00893697581199 12.096469982690119 12 15.110187447338827 11.239613189354598 56.834935643197845 16.815263720108724 13 14.975515859165952 12.476159250915732 62.67058694954751 9.877737940370805 14 13.024364276069706 16.702978639393905 55.35813123781522 14.914525846721169 15 9.411499261421525 13.318032948708458 63.62597963004093 13.644488159829088 16 10.780249107183778 13.696664586660463 54.1746429616468 21.34844334450896 17 11.78993347505579 15.350622062872594 58.78450078088369 14.074943681187928 18 11.63093639058991 13.689261174745198 57.23013682210306 17.449665612561827 19 11.73158753829503 16.557025661635873 54.41560639231737 17.295780407751725 20 12.912431738779423 15.820033632642701 60.248261079558475 11.0192735490194 21 13.372500907799317 19.94990357937339 54.75827860096667 11.919316911860617 22 11.074270323247067 13.31785667699619 58.44500146305521 17.162871536701534 23 12.13648366137499 19.341766172048242 55.44379928997755 13.077950876599227 24 13.314154971038558 15.016410896412166 54.04684597025239 17.62258816229689 25 11.239789461066866 21.273527866794993 52.20128114280477 15.285401529333376 26 11.998815454093558 14.381832732246794 56.635748608334836 16.983603205324815 27 12.8976249149489 16.305838471653747 54.40344364417087 16.393092969226483 28 10.904696936045097 15.64305683352547 58.423143770733965 15.029102459695473 29 17.65308316851928 12.873299418655893 54.06887993428591 15.404737478538918 30 13.247347992088926 17.53550993643642 57.11661783940237 12.100524232072285 31 16.368062386084407 13.708122247957894 53.92028288084385 16.00353248511385 32 19.67791632734362 17.645679756604018 50.61395437383 12.062449542222362 33 17.282383757619343 14.611691045044473 49.08532608504053 19.02059911229566 34 23.159282644639752 16.84822653030287 46.389602789323575 13.602888035733802 35 15.034743154488053 18.152284657662708 49.52547655057412 17.28749563727512 36 19.364152679506297 17.125501933700686 47.38853458274723 16.12181080404579 37 19.033995762428038 19.08722981953302 47.49993830490071 14.378836113138235 38 20.581132581005665 19.04351443489052 44.5022615660684 15.873091418035418 39 24.71611440739213 18.62504538996591 41.27631295984883 15.382527242793131 40 20.59858348052021 18.63333016044251 45.28896221792119 15.479124141116083 41 19.952195111632875 20.26102315152669 44.02156860671313 15.765213130127304 42 17.02062026490113 19.412274856955506 47.215788304724434 16.35131657341893 43 19.805008231888962 18.512760309251092 43.18145762604309 18.500773832816858 44 19.981632487581656 19.037168653248866 41.91441655825957 19.066782300909914 45 16.632646226198915 18.423390551131135 42.49470303504634 22.449260187623608 46 21.624484845920897 21.032035620987617 39.58674859775853 17.75673093533296 47 16.37264545060338 18.072257300292964 47.85054274060207 17.704554508501584 48 19.22807091763528 20.695180378843165 39.63381314493412 20.44293555858743 49 16.201838161415534 18.12831170479424 45.29601308641192 20.37383704737831 50 17.85050748625962 17.454601220505335 42.95124676982087 21.743644523414172 51 18.0133825483954 18.0371792295516 40.23560477061762 23.71383345143538 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 372.0 2 686.0 3 30591.5 4 60497.0 5 41365.5 6 22234.0 7 21103.0 8 19972.0 9 19582.0 10 19192.0 11 18376.0 12 17560.0 13 16702.5 14 15845.0 15 14983.5 16 14122.0 17 13169.0 18 12216.0 19 11191.0 20 10166.0 21 9441.5 22 8717.0 23 8263.5 24 7810.0 25 7253.5 26 6485.5 27 6274.0 28 6364.0 29 6454.0 30 6572.0 31 6690.0 32 6984.0 33 7278.0 34 8021.0 35 8764.0 36 9345.5 37 9927.0 38 10756.0 39 11585.0 40 12468.5 41 13352.0 42 14673.0 43 15994.0 44 18455.5 45 20917.0 46 45425.0 47 69933.0 48 57162.0 49 44391.0 50 39475.0 51 34559.0 52 28453.0 53 22347.0 54 19605.5 55 16864.0 56 15262.5 57 13661.0 58 12375.5 59 11090.0 60 9861.0 61 8632.0 62 7608.0 63 6584.0 64 5785.0 65 4986.0 66 4376.0 67 3766.0 68 3193.0 69 2620.0 70 2202.5 71 1785.0 72 1431.0 73 1077.0 74 972.0 75 689.0 76 511.0 77 410.0 78 309.0 79 226.5 80 144.0 81 110.5 82 77.0 83 60.0 84 43.0 85 36.5 86 30.0 87 23.5 88 17.0 89 10.0 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 567306.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.865886110888184 #Duplication Level Percentage of deduplicated Percentage of total 1 85.23123290995036 43.353621862881205 2 6.551823205889088 6.665285860188573 3 2.6113214693360534 3.9848154137449474 4 1.4736277128283373 2.9982951764229937 5 0.9625621253293045 2.448078772082744 6 0.7047269744134566 2.1507937211871417 7 0.5376566827999723 1.9143868515842926 8 0.40884031022176753 1.6636819725824494 9 0.28488170711319455 1.304168442218564 >10 1.1308785338262386 8.84524023443042 >50 0.049457833002114135 1.7599233857914436 >100 0.044158779408537394 4.714452716302551 >500 0.0045925130584878885 1.4941559054755187 >1k 0.002826161882146393 2.9839991540981914 >5k 3.5327023526829913E-4 1.6548023732440231 >10k+ 0.0010598107058048974 12.064298157764927 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42929 7.5671683359597814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCG 13751 2.4239123153994493 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGC 10458 1.8434495669004027 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 9209 1.6232861982774727 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTGGGTTT 3298 0.5813441070603872 No Hit GAACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCT 3194 0.5630118489844986 No Hit GCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGC 3042 0.5362185487197386 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTC 1766 0.31129584386556813 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTA 1733 0.30547887736071894 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCT 1394 0.24572276690181313 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGTTGGGTTTCGTATGCCG 1144 0.20165483883477345 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGGTTCGTATGC 1035 0.1824412221975442 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTT 979 0.1725700063105273 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGT 810 0.14278008693720848 No Hit GAATCTTTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 705 0.12427155714905183 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 689 0.1214512097527613 No Hit GAATCTGTCTCTTATCCACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 640 0.11281389585162153 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCC 626 0.11034609187986731 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 612 0.10787828790811307 No Hit CTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGCT 589 0.10382403852594543 TruSeq Adapter, Index 21 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5254342453631726E-4 0.0 0.0 0.1274444479698787 0.0 2 3.5254342453631726E-4 0.0 0.0 0.9104433938650394 0.0 3 3.5254342453631726E-4 0.0 0.0 1.1362474572805505 0.0 4 3.5254342453631726E-4 0.0 0.0 2.1029215273591326 0.0 5 3.5254342453631726E-4 0.0 0.0 4.402738557321798 0.0 6 3.5254342453631726E-4 0.0 0.0 5.038903166897582 0.0 7 3.5254342453631726E-4 0.0 0.0 5.697278012219155 0.0 8 3.5254342453631726E-4 0.0 0.0 6.478514240991634 0.0 9 3.5254342453631726E-4 0.0 0.0 6.830176306966611 0.0 10 3.5254342453631726E-4 0.0 0.0 10.301847680087995 0.0 11 3.5254342453631726E-4 0.0 0.0 11.04412786044921 0.0 12 3.5254342453631726E-4 0.0 0.0 14.095391199811036 0.0 13 3.5254342453631726E-4 0.0 0.0 14.48266015166418 0.0 14 3.5254342453631726E-4 0.0 0.0 14.72591511459424 0.0 15 3.5254342453631726E-4 0.0 0.0 15.343042379245064 0.0 16 3.5254342453631726E-4 0.0 0.0 15.709334997338297 0.0 17 3.5254342453631726E-4 0.0 0.0 16.047247869756358 0.0 18 3.5254342453631726E-4 0.0 0.0 16.382516666490396 0.0 19 3.5254342453631726E-4 0.0 0.0 17.390262045527457 0.0 20 3.5254342453631726E-4 0.0 0.0 17.70684604076107 0.0 21 3.5254342453631726E-4 0.0 0.0 18.00844694045189 0.0 22 3.5254342453631726E-4 0.0 0.0 18.4507126665327 0.0 23 3.5254342453631726E-4 0.0 0.0 18.783337387582716 0.0 24 3.5254342453631726E-4 0.0 0.0 19.05162293365485 0.0 25 3.5254342453631726E-4 0.0 0.0 19.26438289036252 0.0 26 3.5254342453631726E-4 0.0 0.0 19.479434379329675 0.0 27 3.5254342453631726E-4 0.0 0.0 19.73044529759953 0.0 28 3.5254342453631726E-4 0.0 0.0 19.937035744377813 0.0 29 3.5254342453631726E-4 0.0 0.0 20.166541513750957 0.0 30 3.5254342453631726E-4 0.0 0.0 20.40944393325648 0.0 31 3.5254342453631726E-4 0.0 0.0 20.6363056269456 0.0 32 3.5254342453631726E-4 0.0 0.0 20.877092785903905 0.0 33 3.5254342453631726E-4 0.0 0.0 21.10060531705993 0.0 34 3.5254342453631726E-4 0.0 0.0 21.34456536683906 0.0 35 3.5254342453631726E-4 0.0 0.0 21.60192206675057 0.0 36 3.5254342453631726E-4 0.0 0.0 21.834953270369077 0.0 37 3.5254342453631726E-4 0.0 0.0 22.054059008718397 0.0 38 3.5254342453631726E-4 0.0 0.0 22.31441232773847 0.0 39 3.5254342453631726E-4 0.0 0.0 22.683172749803457 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAG 20 7.030262E-4 45.000004 6 CGGGATA 55 1.8189894E-12 45.0 6 TCGTTGA 25 3.8883E-5 44.999996 24 GGCATCG 25 3.8883E-5 44.999996 23 GCATCGG 25 3.8883E-5 44.999996 24 GTACGGG 30 2.1635515E-6 44.999996 3 CGTTTTT 20845 0.0 44.73015 1 GACCCGT 115 0.0 43.04348 38 CACCGGT 220 0.0 42.954544 16 GATACCT 1915 0.0 42.29765 5 CGATGAA 215 0.0 41.860466 19 TGATACC 1930 0.0 41.852333 4 TACGGCT 1835 0.0 41.81199 7 ACGGCTG 1835 0.0 41.689373 8 GAATGAT 6120 0.0 41.397057 1 CCGATGA 240 0.0 41.249996 18 CGACCAC 1335 0.0 40.78652 12 AATGATA 5900 0.0 40.76695 2 ATGATAC 6010 0.0 40.54493 3 GCCGATT 50 1.0786607E-9 40.499996 9 >>END_MODULE