SRR2933472.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933472.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	209565
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCG	9994	4.768926108844511	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC	8742	4.1714981032138	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC	7731	3.6890702168778184	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6273	2.9933433540906162	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAAGCTT	2082	0.9934865077660868	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC	1784	0.8512871901319399	No Hit
GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC	1683	0.8030921193901653	No Hit
GAACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT	1628	0.7768472788872187	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTA	1593	0.7601460167489801	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT	1554	0.7415360389377997	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGT	622	0.29680528714241405	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTT	522	0.24908739531887483	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTAT	461	0.21997948130651587	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATG	390	0.186099778111803	No Hit
GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCGTGAAGCTT	282	0.13456445494238065	No Hit
GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTGAAGCT	258	0.12311216090473123	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATTG	20	7.020073E-4	45.000004	35
GCAAGTG	20	7.020073E-4	45.000004	9
TTTCGTG	30	2.156983E-6	45.000004	1
AGCCAAC	20	7.020073E-4	45.000004	35
GATCCGG	20	7.020073E-4	45.000004	5
ACCGACG	20	7.020073E-4	45.000004	17
TTGTACT	20	7.020073E-4	45.000004	1
CCTGTTG	20	7.020073E-4	45.000004	1
GACCCGT	30	2.156983E-6	45.000004	38
ATCAAAT	20	7.020073E-4	45.000004	43
ACGGCGG	20	7.020073E-4	45.000004	30
GATAGCC	20	7.020073E-4	45.000004	9
TGACTCT	20	7.020073E-4	45.000004	4
TCCGGGC	20	7.020073E-4	45.000004	4
TGATCCG	25	3.8798586E-5	45.0	4
AGTTGGG	50	2.1827873E-11	45.0	3
CGGGATA	35	1.2055716E-7	45.0	6
GTCCGGG	25	3.8798586E-5	45.0	3
GCGATTT	45	3.8198777E-10	45.0	9
CATCCGC	25	3.8798586E-5	45.0	42