##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933472.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 209565 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.974957650371007 31.0 28.0 31.0 25.0 34.0 2 27.64407224488822 31.0 25.0 33.0 16.0 34.0 3 27.60845083864195 31.0 25.0 33.0 16.0 34.0 4 32.70923579796245 35.0 32.0 37.0 28.0 37.0 5 34.105924176269895 35.0 33.0 37.0 30.0 37.0 6 33.02363944360938 35.0 32.0 37.0 28.0 37.0 7 33.65775296447403 35.0 33.0 37.0 29.0 37.0 8 33.03314484766063 35.0 32.0 37.0 27.0 37.0 9 34.7165223200439 37.0 34.0 39.0 28.0 39.0 10 34.66305442225563 37.0 33.0 39.0 28.0 39.0 11 35.000391286712954 37.0 34.0 39.0 28.0 39.0 12 34.99012716818171 37.0 34.0 39.0 27.0 39.0 13 34.92955884809009 37.0 34.0 39.0 27.0 39.0 14 35.71837854603584 38.0 34.0 40.0 27.0 41.0 15 35.90750363848925 38.0 34.0 40.0 27.0 41.0 16 36.12486817932384 38.0 34.0 40.0 30.0 41.0 17 35.259017488607356 37.0 33.0 40.0 27.0 41.0 18 35.09308806336936 37.0 33.0 39.0 27.0 40.0 19 34.50899720850333 37.0 33.0 37.0 27.0 40.0 20 33.23740128361129 35.0 32.0 37.0 25.0 39.0 21 34.0180373631093 35.0 33.0 38.0 27.0 40.0 22 34.52942523799299 35.0 33.0 38.0 28.0 40.0 23 34.66663326414239 35.0 33.0 39.0 29.0 40.0 24 34.36526614654164 35.0 33.0 38.0 27.0 40.0 25 33.378073628707085 35.0 32.0 38.0 24.0 40.0 26 33.37011428435092 35.0 32.0 38.0 24.0 40.0 27 34.045971416982795 35.0 33.0 38.0 25.0 40.0 28 33.59599169708682 35.0 33.0 38.0 24.0 40.0 29 33.50319948464677 35.0 33.0 38.0 23.0 40.0 30 32.83414692338892 35.0 31.0 38.0 21.0 40.0 31 32.975945410731754 35.0 32.0 38.0 21.0 40.0 32 32.27470713143893 35.0 31.0 38.0 16.0 40.0 33 31.4795838999833 35.0 30.0 39.0 12.0 40.0 34 30.966554529620883 35.0 28.0 39.0 9.0 40.0 35 30.337680433278457 35.0 24.0 39.0 8.0 40.0 36 29.772547896833917 35.0 22.0 39.0 7.0 40.0 37 29.449497769188557 35.0 21.0 39.0 7.0 40.0 38 29.24115190990862 35.0 21.0 39.0 7.0 40.0 39 28.95594684226851 35.0 20.0 38.0 7.0 40.0 40 28.776942714670867 35.0 20.0 38.0 7.0 40.0 41 28.296762341039774 34.0 18.0 38.0 7.0 40.0 42 28.594631737169852 35.0 18.0 38.0 7.0 40.0 43 28.443714360699545 35.0 18.0 39.0 7.0 40.0 44 28.601569918640994 35.0 18.0 39.0 7.0 40.0 45 28.655729725860713 35.0 18.0 39.0 7.0 40.0 46 28.39211223248157 35.0 18.0 39.0 7.0 40.0 47 28.254780139813423 34.0 18.0 38.0 7.0 40.0 48 28.004485481831413 34.0 18.0 38.0 7.0 40.0 49 28.223448572042088 34.0 17.0 39.0 7.0 40.0 50 28.143917161739793 34.0 18.0 39.0 7.0 40.0 51 27.06681459213132 33.0 15.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 16.0 11 12.0 12 11.0 13 21.0 14 37.0 15 65.0 16 118.0 17 249.0 18 528.0 19 899.0 20 1543.0 21 2256.0 22 3158.0 23 4455.0 24 6289.0 25 8941.0 26 11617.0 27 12388.0 28 11060.0 29 9897.0 30 10047.0 31 11082.0 32 13002.0 33 15177.0 34 17179.0 35 18561.0 36 18952.0 37 17386.0 38 12688.0 39 1917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.10111421277408 2.216973254121633 25.58108462768115 38.10082790542314 2 36.94032877627467 25.8945911769618 26.724882494691382 10.44019755207215 3 9.564097058191969 26.30735094123542 53.07279364397681 11.055758356595806 4 9.337914250948392 2.3925750960322576 75.65624030730322 12.613270345716126 5 27.158160952449123 2.78481616682175 55.00059647364779 15.056426407081336 6 10.512251568725693 22.122491828311023 58.64958366139385 8.71567294156944 7 42.73805263283468 1.0163910958413858 53.45739985207454 2.7881564192493977 8 40.19182592513062 18.01970748932312 37.5434829289242 4.2449836566220505 9 38.027342352014884 2.425023262472264 35.71159306181853 23.836041323694317 10 29.528785818242547 14.942857824541312 42.29093598644812 13.23742037076802 11 25.804404361415312 13.17300121680624 48.10631546298285 12.916278958795601 12 18.777467611480926 11.681339918402404 48.6207143368406 20.92047813327607 13 17.06200940042469 14.681840956266552 58.86049674325389 9.395652900054875 14 14.42845895068356 23.480065850690718 45.255171426526374 16.83630377209935 15 8.4589506835588 14.14262877866056 62.769546441438216 14.628874096342424 16 10.378164292701548 15.84949776918856 47.4626011022833 26.30973683582659 17 10.906401355188128 17.411304368572996 55.430534678977885 16.251759597260993 18 10.233579080476224 16.330016939851596 52.55028272850906 20.88612125116312 19 11.780593133395366 19.55336053253167 48.11729057810226 20.548755755970703 20 14.637940495788895 17.342590604347098 56.68837830744637 11.331090592417628 21 14.251902750936463 25.961396225514754 47.93405387349987 11.85264715004891 22 10.852480137427529 13.516570037935724 53.11907999904564 22.511869825591106 23 12.420967241667263 24.817598358504522 49.764035024932596 12.997399374895618 24 15.363729630424928 16.295660057738647 47.145754300575 21.19485601126142 25 10.434471405053324 29.694366902870232 44.998449168515734 14.872712523560708 26 12.726361749337913 14.990098537446617 52.567938348483764 19.715601364731704 27 16.24889652375158 20.004294610264118 45.57679001741703 18.17001884856727 28 11.63123613198769 18.549853267482643 53.914537255744044 15.904373344785627 29 20.47002123446186 15.206260587407247 47.52511154057214 16.798606637558752 30 13.027461646744449 23.39178775081717 52.01870541359482 11.562045188843557 31 22.13012669100279 14.967193949371316 42.579152053062295 20.323527306563598 32 20.340228568701836 26.497745329611337 41.17004270751318 11.991983394173646 33 15.661966454322048 19.609190465965217 40.930498890559015 23.798344189153724 34 28.869801732159473 19.051845489466277 37.47667788037125 14.601674898003006 35 13.72939183546871 20.069668122062367 43.10691193663064 23.094028105838284 36 26.420442344857204 18.966907642020374 38.346575048314364 16.266074964808055 37 14.962422160188963 24.991291484742202 45.22892658602343 14.817359769045405 38 21.145229403764944 25.66888554863646 34.22231765800587 18.96356738959273 39 24.22303342638322 25.032806050628682 35.67580464295087 15.06835588003722 40 15.583231932813208 23.864194879870208 38.48495693460263 22.067616252713957 41 21.430582396869706 22.677928089137023 38.939231264762725 16.95225824923055 42 15.475866676210245 21.139980435664352 41.53985636914561 21.844296518979792 43 20.39892157564479 20.58931596402071 37.67613866819364 21.33562379214086 44 20.666618948774843 20.69286378927779 38.35755016343378 20.282967098513588 45 16.958938754085846 20.285830172023 36.30424927826689 26.45098179562427 46 23.785937537279604 26.155608045236562 31.93758499749481 18.120869419989024 47 14.030014553957008 21.10180612220552 46.087848638847134 18.780330684990336 48 21.95023023882805 23.042492782668862 31.92517834562069 23.0820986328824 49 15.692983084007347 18.80180373631093 42.05425524300336 23.450957936678357 50 19.18593276549042 18.313649702956123 38.45298594708086 24.047431584472598 51 19.039916016510393 18.8027580941474 34.71906091188891 27.438264977453297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 29.0 1 270.5 2 512.0 3 6411.0 4 12310.0 5 9546.5 6 6783.0 7 6892.5 8 7002.0 9 6983.5 10 6965.0 11 6572.0 12 6179.0 13 5797.0 14 5415.0 15 4987.0 16 4559.0 17 4115.5 18 3672.0 19 3410.5 20 3149.0 21 2918.0 22 2687.0 23 2593.0 24 2499.0 25 2363.0 26 2377.0 27 2527.0 28 2550.0 29 2573.0 30 2592.5 31 2612.0 32 2731.5 33 2851.0 34 3112.0 35 3373.0 36 3536.5 37 3700.0 38 3905.0 39 4110.0 40 4727.0 41 5344.0 42 5878.0 43 6412.0 44 7220.0 45 8028.0 46 26380.5 47 44733.0 48 29762.5 49 14792.0 50 13191.5 51 11591.0 52 9413.5 53 7236.0 54 6473.0 55 5710.0 56 5208.0 57 4706.0 58 4557.5 59 4409.0 60 3926.0 61 3443.0 62 2954.0 63 2465.0 64 2094.0 65 1723.0 66 1436.5 67 1150.0 68 922.5 69 695.0 70 629.0 71 563.0 72 452.0 73 341.0 74 267.5 75 160.0 76 126.0 77 90.0 78 54.0 79 66.5 80 79.0 81 45.5 82 12.0 83 14.5 84 17.0 85 11.0 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 209565.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.23765896022714 #Duplication Level Percentage of deduplicated Percentage of total 1 86.85590049773207 37.55445804404361 2 4.885720276787586 4.224942142056164 3 1.609076160731037 2.087180588361606 4 1.0009822207016807 1.7312051153580037 5 0.6798291598150334 1.4697110681650085 6 0.5562238580304819 1.4429890487438264 7 0.5198044387546766 1.5732588934220888 8 0.43703303130966437 1.511702812969723 9 0.43924026884153133 1.7092548851191756 >10 2.9135535420644296 21.427242144442058 >50 0.04966284446700732 1.4792546465297163 >100 0.03973027557360585 2.69367499343879 >500 0.0022072375318669918 0.5458926824612889 >1k 0.006621712595600977 4.926395151862191 >5k 0.0044144750637339835 15.622837783026746 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCG 9994 4.768926108844511 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC 8742 4.1714981032138 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC 7731 3.6890702168778184 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6273 2.9933433540906162 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAAGCTT 2082 0.9934865077660868 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC 1784 0.8512871901319399 No Hit GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 1683 0.8030921193901653 No Hit GAACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT 1628 0.7768472788872187 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTA 1593 0.7601460167489801 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT 1554 0.7415360389377997 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGT 622 0.29680528714241405 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTT 522 0.24908739531887483 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTAT 461 0.21997948130651587 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATG 390 0.186099778111803 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCGTGAAGCTT 282 0.13456445494238065 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTGAAGCT 258 0.12311216090473123 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10402500417531553 0.0 2 0.0 0.0 0.0 1.0493164411996279 0.0 3 0.0 0.0 0.0 1.1690883496767113 0.0 4 0.0 0.0 0.0 2.1253549018204376 0.0 5 0.0 0.0 0.0 6.45193615346074 0.0 6 0.0 0.0 0.0 6.81029752105552 0.0 7 0.0 0.0 0.0 7.748908453224536 0.0 8 0.0 0.0 0.0 8.843556891656526 0.0 9 0.0 0.0 0.0 8.991005177391262 0.0 10 0.0 0.0 0.0 14.842650251711879 0.0 11 0.0 0.0 0.0 15.109870445923699 0.0 12 0.0 0.0 0.0 20.214730513205925 0.0 13 0.0 0.0 0.0 20.57547777539188 0.0 14 0.0 0.0 0.0 20.885644072244887 0.0 15 0.0 0.0 0.0 21.894877484312744 0.0 16 0.0 0.0 0.0 22.33960823610813 0.0 17 0.0 0.0 0.0 22.557679001741704 0.0 18 0.0 0.0 0.0 22.70608164531291 0.0 19 0.0 0.0 0.0 24.07319924605731 0.0 20 0.0 0.0 0.0 24.33517047216854 0.0 21 0.0 0.0 0.0 24.476415431966217 0.0 22 0.0 0.0 0.0 24.85290959845394 0.0 23 0.0 0.0 0.0 25.0141960728175 0.0 24 0.0 0.0 0.0 25.14398873857753 0.0 25 0.0 0.0 0.0 25.245627848161668 0.0 26 0.0 0.0 0.0 25.415980721971703 0.0 27 0.0 0.0 0.0 25.63596020327822 0.0 28 0.0 0.0 0.0 25.72805573449765 0.0 29 0.0 0.0 0.0 25.844487390547087 0.0 30 0.0 0.0 0.0 25.959487509841814 0.0 31 0.0 0.0 0.0 26.07591916589125 0.0 32 0.0 0.0 0.0 26.202848758141865 0.0 33 0.0 0.0 0.0 26.305442225562473 0.0 34 0.0 0.0 0.0 26.50490301338487 0.0 35 0.0 0.0 0.0 26.61656288025195 0.0 36 0.0 0.0 0.0 26.747309903848446 0.0 37 0.0 0.0 0.0 26.89523536850142 0.0 38 0.0 0.0 0.0 27.021210602915563 0.0 39 0.0 0.0 0.0 27.181542719442653 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATTG 20 7.020073E-4 45.000004 35 GCAAGTG 20 7.020073E-4 45.000004 9 TTTCGTG 30 2.156983E-6 45.000004 1 AGCCAAC 20 7.020073E-4 45.000004 35 GATCCGG 20 7.020073E-4 45.000004 5 ACCGACG 20 7.020073E-4 45.000004 17 TTGTACT 20 7.020073E-4 45.000004 1 CCTGTTG 20 7.020073E-4 45.000004 1 GACCCGT 30 2.156983E-6 45.000004 38 ATCAAAT 20 7.020073E-4 45.000004 43 ACGGCGG 20 7.020073E-4 45.000004 30 GATAGCC 20 7.020073E-4 45.000004 9 TGACTCT 20 7.020073E-4 45.000004 4 TCCGGGC 20 7.020073E-4 45.000004 4 TGATCCG 25 3.8798586E-5 45.0 4 AGTTGGG 50 2.1827873E-11 45.0 3 CGGGATA 35 1.2055716E-7 45.0 6 GTCCGGG 25 3.8798586E-5 45.0 3 GCGATTT 45 3.8198777E-10 45.0 9 CATCCGC 25 3.8798586E-5 45.0 42 >>END_MODULE