##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933471.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 138626 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.767922323373682 31.0 25.0 31.0 16.0 33.0 2 27.554376523884407 31.0 25.0 33.0 16.0 34.0 3 27.66093662083592 31.0 25.0 33.0 16.0 34.0 4 31.26313245711483 35.0 28.0 35.0 19.0 37.0 5 33.5421060984231 35.0 33.0 37.0 28.0 37.0 6 31.660929407181914 35.0 32.0 37.0 17.0 37.0 7 32.362861223724266 35.0 32.0 35.0 26.0 37.0 8 32.17396447996768 35.0 32.0 36.0 17.0 37.0 9 33.155180124940486 35.0 32.0 37.0 26.0 39.0 10 32.0271810482882 35.0 28.0 39.0 17.0 39.0 11 32.67506095537634 35.0 30.0 39.0 17.0 39.0 12 33.39665719273441 35.0 31.0 39.0 23.0 39.0 13 33.41034149438056 35.0 31.0 39.0 25.0 39.0 14 33.47672875218213 36.0 31.0 40.0 19.0 41.0 15 34.01923160157546 36.0 32.0 40.0 23.0 41.0 16 34.29817638826771 36.0 32.0 40.0 25.0 41.0 17 32.228110166923955 35.0 27.0 39.0 18.0 41.0 18 32.91065889515675 36.0 30.0 39.0 23.0 39.0 19 32.74095768470561 36.0 30.0 37.0 21.0 39.0 20 31.897126080244686 34.0 30.0 35.0 23.0 39.0 21 32.47140507552696 35.0 31.0 37.0 23.0 39.0 22 32.72448891261379 34.0 30.0 37.0 25.0 39.0 23 33.51227042546131 35.0 32.0 38.0 26.0 39.0 24 32.18950269069294 35.0 31.0 37.0 21.0 39.0 25 31.313613607836913 34.0 29.0 37.0 18.0 39.0 26 30.460115707010228 33.0 25.0 37.0 18.0 39.0 27 32.2676265635595 34.0 30.0 37.0 22.0 39.0 28 32.12227143537287 35.0 30.0 37.0 21.0 39.0 29 32.123728593481744 35.0 30.0 37.0 21.0 39.0 30 31.135681618166867 34.0 28.0 37.0 18.0 39.0 31 31.62812170877036 34.0 30.0 37.0 20.0 39.0 32 31.400372224546622 35.0 30.0 37.0 18.0 39.0 33 31.201737047884237 35.0 30.0 37.0 15.0 40.0 34 30.337808203367334 35.0 27.0 38.0 10.0 40.0 35 29.73479722418594 35.0 24.0 38.0 8.0 40.0 36 29.045482088497106 34.0 22.0 38.0 7.0 40.0 37 28.65155887063033 34.0 21.0 37.0 7.0 40.0 38 28.585366381486878 34.0 21.0 37.0 7.0 40.0 39 28.120489662833812 33.0 20.0 37.0 7.0 39.0 40 27.956047206151805 33.0 20.0 37.0 7.0 39.0 41 27.40394298327875 33.0 18.0 37.0 7.0 39.0 42 28.085633286685038 33.0 20.0 37.0 7.0 40.0 43 27.893699594592643 33.0 18.0 37.0 7.0 40.0 44 27.788748142484096 33.0 18.0 37.0 7.0 40.0 45 27.975091252723153 34.0 18.0 38.0 7.0 40.0 46 27.55068313303421 33.0 17.0 37.0 7.0 40.0 47 27.620576226681862 33.0 18.0 37.0 7.0 40.0 48 27.358864859405884 33.0 17.0 37.0 7.0 40.0 49 27.33863777357783 33.0 17.0 37.0 7.0 40.0 50 27.3951351117395 33.0 17.0 37.0 7.0 40.0 51 25.85417598430309 31.0 15.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 10.0 11 8.0 12 6.0 13 17.0 14 44.0 15 82.0 16 204.0 17 346.0 18 575.0 19 950.0 20 1400.0 21 1993.0 22 2697.0 23 3645.0 24 4855.0 25 6432.0 26 8419.0 27 9078.0 28 8509.0 29 8560.0 30 9097.0 31 10195.0 32 11297.0 33 12010.0 34 12555.0 35 12490.0 36 8218.0 37 4068.0 38 850.0 39 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.595645838443005 2.3213538585835267 28.555249376018928 40.52775092695454 2 41.35299294504639 19.71203093214837 28.053900422720123 10.881075700085121 3 10.068096893800586 19.862074935437796 58.63113701614415 11.43869115461746 4 10.050062758789839 2.3956544948278102 74.23066380044148 13.323618945940877 5 23.17747031581377 2.751287637239767 59.83437450406128 14.236867542885173 6 10.950326778526396 16.844603465439384 62.064836322190644 10.140233433843578 7 43.13260138790703 1.0207320416083563 52.889068428721885 2.9575981417627286 8 42.53458947095062 13.806212398828501 38.82460721653946 4.834590913681416 9 39.32018524663483 2.409360437435979 38.43651263110816 19.83394168482103 10 26.93650541745416 15.169593005641078 43.76740294028537 14.126498636619395 11 23.31525110729589 13.853101149856448 50.874294865321076 11.957352877526581 12 19.172449612626778 12.602974910911374 50.26185564035607 17.96271983610578 13 16.289152107108336 15.467516916018639 58.960079638740204 9.283251338132818 14 13.358965850561944 20.35332477313058 48.448343023675214 17.839366352632265 15 8.48830666685903 14.757693361995585 62.48322825444001 14.27077171670538 16 10.35087213076912 14.016129730353613 50.37799546982529 25.25500266905198 17 10.652402868148831 16.36201001255176 56.71014095479925 16.275446164500167 18 9.995960353757592 14.893310057276413 55.221964133712284 19.888765455253704 19 11.966009262331742 18.93512039588533 50.09738432905804 19.001486012724886 20 14.015408364953183 16.561828228470848 57.7957958824463 11.626967524129672 21 14.4785249520292 23.4551959949793 49.36591981302209 12.700359239969414 22 11.024627414770679 13.936058170905891 53.66453623418407 21.374778180139366 23 12.117495996422027 23.365025319925557 50.452296106069575 14.06518257758285 24 14.163288272041319 15.26481323849783 50.1348953298804 20.437003159580456 25 10.763493139815042 24.72191363813426 48.03283655302757 16.481756669023127 26 12.333184251150579 15.656514650931284 54.31520782537186 17.695093272546274 27 13.587638682498232 18.92069308787673 49.43156406446121 18.060104165163825 28 11.572143753696999 17.52340830724395 56.01041651638221 14.894031422676843 29 18.152438936418854 15.041189964364548 50.67736211100371 16.129008988212888 30 12.922539783301835 22.181986063220464 53.19059916610159 11.704874987376106 31 19.38236694415189 15.426399088194135 45.98992973901 19.201304228643977 32 18.796618239002786 24.07268477774732 44.79102044349545 12.339676539754448 33 14.997908040338753 18.259201015682482 44.742688961666644 22.00020198231212 34 25.12659962777545 18.701398006146032 40.95119241700691 15.220809949071604 35 13.219020962878536 19.155136843016464 46.255392206368214 21.37044998773679 36 24.481698959791093 17.772279370392276 41.19357119155137 16.55245047826526 37 14.633618513121638 23.806500944988674 46.57495707875867 14.984923463131015 38 19.576414236867542 25.03931441432343 38.25400718479939 17.13026416400964 39 21.584695511664478 23.483329245596064 39.79628641091858 15.13568883182087 40 15.662285574134721 21.62581333948898 41.19573528775266 21.516165798623636 41 19.746656471369008 20.061171785956457 43.05830075166275 17.133870991011786 42 15.272748257902558 19.47037352300434 44.31564064461212 20.94123757448098 43 19.088771226176906 18.932234934283613 41.08248091988516 20.896512919654324 44 20.076320459365487 19.787052933793085 41.03487080345678 19.101755803384645 45 17.157676049225977 19.81518618440985 39.035245913465005 23.991891852899165 46 21.239161484858542 25.125878262375025 35.257455311413445 18.377504941352992 47 14.171944656846481 20.59570354767504 46.137809646098134 19.09454214938035 48 21.3682858915355 21.508230779218906 35.24952029200871 21.873963037236884 49 15.714945248366108 18.20870543765239 42.212139136958434 23.864210177023068 50 18.488595213019202 17.791756236203888 39.494034308138446 24.225614242638464 51 18.64441013951207 18.00239493312943 37.37899095407788 25.974203973280623 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 32.0 1 120.0 2 208.0 3 6340.5 4 12473.0 5 8610.0 6 4747.0 7 4843.5 8 4940.0 9 4971.5 10 5003.0 11 4675.0 12 4347.0 13 3889.0 14 3431.0 15 3072.5 16 2714.0 17 2444.5 18 2175.0 19 2022.0 20 1869.0 21 1703.5 22 1538.0 23 1495.5 24 1453.0 25 1357.5 26 1358.5 27 1455.0 28 1488.5 29 1522.0 30 1526.0 31 1530.0 32 1650.0 33 1770.0 34 1810.0 35 1850.0 36 2049.5 37 2249.0 38 2368.5 39 2488.0 40 2975.5 41 3463.0 42 3931.5 43 4400.0 44 5053.5 45 5707.0 46 13485.0 47 21263.0 48 16751.0 49 12239.0 50 10873.5 51 9508.0 52 7731.5 53 5955.0 54 5030.5 55 4106.0 56 3624.0 57 3142.0 58 2978.5 59 2815.0 60 2519.5 61 2224.0 62 1865.0 63 1506.0 64 1298.0 65 1090.0 66 948.5 67 807.0 68 635.0 69 463.0 70 413.5 71 364.0 72 297.0 73 230.0 74 171.5 75 99.5 76 86.0 77 57.5 78 29.0 79 33.5 80 38.0 81 23.5 82 9.0 83 8.0 84 7.0 85 5.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 138626.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.08245206526914 #Duplication Level Percentage of deduplicated Percentage of total 1 84.2773937532002 37.99431564064461 2 5.979582693292371 5.391485002813325 3 2.2657450076804917 3.0643602210263587 4 1.387288786482335 2.5016952086910105 5 1.0304659498207887 2.3227965893843865 6 0.7984511008704558 2.1597680088872218 7 0.6336405529953917 1.9996248899917763 8 0.5232334869431644 1.8870918875247067 9 0.4896313364055299 1.9866403127840375 >10 2.4961597542242706 17.798248524807754 >50 0.056003584229390675 1.7514751922438792 >100 0.04800307219662058 3.7099822544111496 >500 0.008000512032770097 2.796012292066423 >1k 0.004800307219662059 8.141329909252233 >5k 0.0016001024065540196 6.495174065471124 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9004 6.495174065471124 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCG 4990 3.5996133481453696 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC 3734 2.693578405205373 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC 2562 1.8481381559014902 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAAGCTT 996 0.718479938828214 No Hit GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 852 0.6146033211663036 No Hit GAACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT 747 0.5388599541211605 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC 694 0.500627587898374 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTA 587 0.4234414900523711 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT 445 0.32100760319132055 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGTGAAGCTTCGTATGCCG 429 0.3094657567844416 No Hit CTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGCT 247 0.17817725390619363 No Hit GAATGACTCTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT 242 0.17457042690404398 No Hit GAATCTTTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC 233 0.16807813830017457 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGT 212 0.15292946489114595 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCGTGAAGCTTCGTATGC 192 0.13850215688254727 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTAT 182 0.13128850287824795 No Hit TCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 178 0.1284030412765282 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC 178 0.1284030412765282 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTT 177 0.12768167587609827 No Hit GAATCTGTCTCTTATCCACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC 167 0.12046802187179893 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 158 0.11397573326792952 No Hit CCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 156 0.11253300246706965 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC 139 0.1002697906597608 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 139 0.1002697906597608 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2221805433324196 0.0 2 0.0 0.0 0.0 1.3107209325811897 0.0 3 0.0 0.0 0.0 1.5711338421363958 0.0 4 0.0 0.0 0.0 2.560125806125835 0.0 5 0.0 0.0 0.0 5.063263745617705 0.0 6 0.0 0.0 0.0 5.468671100659328 0.0 7 0.0 0.0 0.0 6.0775034986221925 0.0 8 0.0 0.0 0.0 6.97055386435445 0.0 9 0.0 0.0 0.0 7.169650714873112 0.0 10 0.0 0.0 0.0 12.432732676409909 0.0 11 0.0 0.0 0.0 13.229841443884986 0.0 12 0.0 0.0 0.0 17.055963527765353 0.0 13 0.0 0.0 0.0 17.39861209296957 0.0 14 0.0 0.0 0.0 17.63738404051188 0.0 15 0.0 0.0 0.0 18.330616190325046 0.0 16 0.0 0.0 0.0 18.716546679555062 0.0 17 0.0 0.0 0.0 19.108969457388945 0.0 18 0.0 0.0 0.0 19.466045330601762 0.0 19 0.0 0.0 0.0 20.662069164514595 0.0 20 0.0 0.0 0.0 21.063869692554068 0.0 21 0.0 0.0 0.0 21.46206339359139 0.0 22 0.0 0.0 0.0 22.190642448025624 0.0 23 0.0 0.0 0.0 22.598935264668967 0.0 24 0.0 0.0 0.0 22.836985846810844 0.0 25 0.0 0.0 0.0 23.031754504926926 0.0 26 0.0 0.0 0.0 23.246000028854617 0.0 27 0.0 0.0 0.0 23.477558322392625 0.0 28 0.0 0.0 0.0 23.62760232568205 0.0 29 0.0 0.0 0.0 23.828863272402003 0.0 30 0.0 0.0 0.0 24.016418276513786 0.0 31 0.0 0.0 0.0 24.240762916047494 0.0 32 0.0 0.0 0.0 24.423268362356268 0.0 33 0.0 0.0 0.0 24.62380794367579 0.0 34 0.0 0.0 0.0 24.81713387099101 0.0 35 0.0 0.0 0.0 25.012623894507524 0.0 36 0.0 0.0 0.0 25.219655764430915 0.0 37 0.0 0.0 0.0 25.392062095133667 0.0 38 0.0 0.0 0.0 25.557254771832124 0.0 39 0.0 0.0 0.0 25.796748084774862 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 45 3.8016879E-10 45.000004 17 CTCGTAA 35 1.2016244E-7 45.000004 33 ATGACTC 45 3.8016879E-10 45.000004 3 TCGTAAC 35 1.2016244E-7 45.000004 34 CGTAACC 35 1.2016244E-7 45.000004 35 CCGGTGT 35 1.2016244E-7 45.000004 18 CACCGGT 70 0.0 45.000004 16 GATAAAA 40 6.7411747E-9 45.0 19 ACTGACG 20 7.011811E-4 45.0 28 ACCGCTG 25 3.8730162E-5 45.0 17 TCCCTTG 25 3.8730162E-5 45.0 1 CCGTGTC 20 7.011811E-4 45.0 19 GGATCCT 25 3.8730162E-5 45.0 8 GAATAGC 40 6.7411747E-9 45.0 27 CGCCTCT 20 7.011811E-4 45.0 16 AACATGC 40 6.7411747E-9 45.0 43 GGGGTAT 25 3.8730162E-5 45.0 7 GCGGGAT 20 7.011811E-4 45.0 5 CTGTTGG 55 1.8189894E-12 45.0 2 CGAATAG 40 6.7411747E-9 45.0 26 >>END_MODULE