SRR2933470.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933470.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	237760
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCG	9982	4.19835127860027	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8416	3.539703903095558	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGC	8131	3.419835127860027	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTC	7794	3.2780955585464335	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTC	2001	0.8416049798115747	No Hit
GAACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCT	1886	0.7932368775235532	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTTTCAT	1861	0.7827220726783312	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTA	1793	0.754121803499327	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCT	1613	0.6784152086137282	No Hit
GCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC	1516	0.6376177658142664	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGT	676	0.28432032301480487	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTT	404	0.16991924629878868	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATG	402	0.16907806191117092	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTAT	401	0.16865746971736204	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	285	0.11986877523553162	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	251	0.10556864064602961	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	251	0.10556864064602961	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTCGG	20	7.0219894E-4	45.000004	2
GTTTGCG	30	2.1582164E-6	45.000004	1
ACCGGTG	60	0.0	45.000004	17
GCCCAGT	20	7.0219894E-4	45.000004	12
AGATCAG	20	7.0219894E-4	45.000004	19
ACGCCGG	20	7.0219894E-4	45.000004	27
TTCAGTG	20	7.0219894E-4	45.000004	35
GCGCGAC	20	7.0219894E-4	45.000004	9
GCAACGA	20	7.0219894E-4	45.000004	17
GCAGTAT	20	7.0219894E-4	45.000004	9
ACCGACG	20	7.0219894E-4	45.000004	17
CACGCCG	20	7.0219894E-4	45.000004	26
GGATAGT	20	7.0219894E-4	45.000004	8
GCTTGCG	20	7.0219894E-4	45.000004	1
TCTAGAG	30	2.1582164E-6	45.000004	31
GTTACTA	20	7.0219894E-4	45.000004	18
TGGTTAC	20	7.0219894E-4	45.000004	16
ACGATGC	20	7.0219894E-4	45.000004	20
CCTCCGC	20	7.0219894E-4	45.000004	45
AATGACT	180	0.0	45.000004	2