SRR2933467.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933467.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	597842
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34825	5.825117673231389	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCG	13805	2.309138534930634	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTC	10671	1.7849197614085328	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGC	8708	1.4565721377889143	No Hit
GAACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCT	3705	0.6197289584873595	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCTCTT	2586	0.43255575887943637	No Hit
GCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC	2518	0.421181516186551	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTC	2289	0.3828770812355104	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCT	1407	0.23534646277779078	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTA	1310	0.21912144011293952	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTCACCTCTTCGTATGCCG	1124	0.18800954098240003	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTT	1025	0.17144998176775803	No Hit
GAATCTTTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTC	828	0.13849813161336944	No Hit
GAATCTGTCTCTTATCCACATCTGACGCTCACCTCTTCGTATGCCGTCTTC	679	0.11357515865395874	No Hit
CTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGCT	678	0.11340789037906336	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCACCTCTTCGT	675	0.11290608555437724	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	633	0.10588081800877154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCCG	20	7.030568E-4	45.0	40
CTACGGC	80	0.0	45.0	6
CGCCCTA	20	7.030568E-4	45.0	25
TCAAGCG	65	0.0	44.999996	17
CGTTTTT	17980	0.0	44.474415	1
TACGGCT	1285	0.0	43.249027	7
ATGATAC	4965	0.0	42.280964	3
GAATGAT	5325	0.0	42.21127	1
AATGATA	4945	0.0	42.17897	2
ACGGCTG	1330	0.0	42.12406	8
AATGATC	465	0.0	42.096775	2
ATACGGC	3040	0.0	42.039474	6
TGATACC	1920	0.0	41.718746	4
CACCGGT	135	0.0	41.666664	16
TGGGCGA	655	0.0	41.564884	6
GATACCT	1930	0.0	41.50259	5
TGATACG	3130	0.0	41.40575	4
TGATCCG	125	0.0	41.4	4
ACACGTG	60	3.6379788E-12	41.249996	42
TCGTCCC	60	3.6379788E-12	41.249996	38