##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933467.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 597842 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.213263705126103 31.0 26.0 31.0 16.0 33.0 2 28.293060708347692 31.0 28.0 33.0 16.0 34.0 3 28.45276009380405 31.0 28.0 33.0 16.0 34.0 4 31.772650633444957 35.0 28.0 37.0 19.0 37.0 5 33.570174059366856 35.0 33.0 37.0 28.0 37.0 6 32.454889418943466 35.0 32.0 37.0 17.0 37.0 7 32.193360453096304 35.0 32.0 35.0 25.0 37.0 8 32.78186377002619 35.0 32.0 35.0 26.0 37.0 9 32.96380147262989 35.0 31.0 37.0 25.0 39.0 10 31.729809882878754 35.0 28.0 39.0 15.0 39.0 11 32.528060925796446 35.0 30.0 39.0 17.0 39.0 12 33.258661987615454 35.0 31.0 39.0 23.0 39.0 13 33.39391678737861 35.0 32.0 39.0 25.0 39.0 14 33.59370201491364 36.0 32.0 40.0 21.0 41.0 15 34.0650707042998 36.0 32.0 40.0 25.0 41.0 16 34.231106212009195 37.0 32.0 40.0 25.0 41.0 17 32.27061497853948 35.0 27.0 39.0 18.0 41.0 18 32.94752794216532 36.0 30.0 39.0 23.0 39.0 19 32.73185055583248 36.0 30.0 37.0 21.0 39.0 20 32.212827134928624 34.0 30.0 36.0 23.0 39.0 21 32.67447921022611 35.0 31.0 37.0 24.0 39.0 22 32.98008169382546 35.0 31.0 37.0 25.0 39.0 23 33.903425988806404 35.0 32.0 38.0 27.0 40.0 24 32.281995911963364 35.0 31.0 37.0 21.0 39.0 25 31.423396148146164 34.0 29.0 37.0 18.0 39.0 26 30.582588710729592 33.0 25.0 37.0 18.0 39.0 27 32.40776827322269 34.0 30.0 37.0 22.0 39.0 28 32.17481541945865 35.0 31.0 37.0 21.0 39.0 29 32.470403551440015 35.0 31.0 38.0 21.0 40.0 30 31.49050585271694 34.0 29.0 37.0 18.0 40.0 31 31.51901338480736 34.0 30.0 37.0 18.0 39.0 32 31.512277491377322 35.0 30.0 37.0 18.0 39.0 33 31.08557444943647 35.0 29.0 38.0 15.0 40.0 34 30.368366558388338 35.0 27.0 38.0 10.0 40.0 35 29.82962388055707 35.0 25.0 38.0 8.0 40.0 36 29.09857286707859 34.0 23.0 38.0 7.0 40.0 37 29.382385312507317 35.0 23.0 38.0 7.0 40.0 38 29.064691005315787 34.0 22.0 38.0 7.0 40.0 39 28.64549830891774 34.0 22.0 37.0 7.0 40.0 40 28.474080108122212 33.0 21.0 37.0 7.0 40.0 41 27.549454538155565 33.0 18.0 37.0 7.0 40.0 42 28.373409696876433 33.0 21.0 37.0 7.0 40.0 43 28.355501955366133 33.0 21.0 38.0 7.0 40.0 44 28.447772153846667 34.0 20.0 38.0 7.0 40.0 45 28.700477718193103 34.0 20.0 38.0 7.0 40.0 46 28.39283790700553 34.0 20.0 38.0 7.0 40.0 47 28.501624174949235 34.0 20.0 38.0 7.0 40.0 48 28.255816754259488 34.0 20.0 37.0 7.0 40.0 49 28.19114414845394 34.0 20.0 37.0 7.0 40.0 50 28.33448302394278 34.0 20.0 38.0 7.0 40.0 51 26.576105392394645 31.0 18.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 17.0 10 34.0 11 39.0 12 41.0 13 67.0 14 125.0 15 246.0 16 508.0 17 1075.0 18 2029.0 19 3377.0 20 5436.0 21 7701.0 22 10953.0 23 15204.0 24 20727.0 25 28021.0 26 34253.0 27 35337.0 28 33709.0 29 34309.0 30 38017.0 31 43000.0 32 48483.0 33 53223.0 34 57144.0 35 57385.0 36 41437.0 37 21473.0 38 4390.0 39 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.1138260610663 2.381732966235226 33.07228331231329 39.43215766038519 2 40.64317997062769 14.64601014983892 31.524717232981292 13.1860926465521 3 11.665456759478257 14.637981272643943 60.254883397285575 13.44167857059223 4 10.673221352798901 2.6376534268251475 70.5077595752724 16.181365645103558 5 19.626255766573777 3.08844142766818 60.370465775238266 16.91483703051977 6 13.526149049414393 11.829045132325932 63.28611907493953 11.358686743320142 7 50.38973508050623 1.0989525660626052 45.47723311510399 3.034079238327183 8 50.2313320241803 8.818550720758997 36.563841282479316 4.386275972581384 9 46.279619029777095 2.4929663690406496 36.267943704189406 14.959470896992851 10 26.921661576135502 16.37355689295834 42.7761850120935 13.928596518812665 11 21.124310436536746 15.40674626406308 49.37391484706662 14.09502845233356 12 17.843845029288673 13.546388510676735 51.670173724830306 16.939592735204283 13 16.063943316127002 14.889050953261899 57.19721933219814 11.84978639841296 14 14.364999448014693 18.395161263343827 50.60082764342418 16.6390116452173 15 11.159804764469543 15.782932614302775 58.306709799579146 14.75055282164853 16 13.400697843242865 16.34027050625416 48.666704580808975 21.592327069694 17 13.827566480775857 16.75359041352063 52.69536098166405 16.723482124039464 18 13.936959932557432 15.817724415481013 51.954864328702236 18.290451323259322 19 14.002696364591314 18.94748110704835 48.216418384790636 18.833404143569705 20 15.183443117077754 18.862007018576815 53.27962906587359 12.674920798471836 21 15.547418883250089 21.049039712833824 49.82921909133182 13.574322312584261 22 13.611455869611033 14.820470960554797 51.942486476359974 19.625586693474194 23 13.889455742487144 20.906694410897863 50.604507545471876 14.599342301143112 24 15.470642745073112 17.017707019580424 48.54342786221109 18.968222373135376 25 13.217037277407742 22.61366715620515 46.93815422804018 17.23114133834692 26 13.48433198069055 16.233887883420703 51.14043509823666 19.141345037652087 27 15.270255351748455 17.90657063237444 47.73384941171748 19.08932460415963 28 11.733702215635569 18.14777148477357 52.09871504511226 18.019811254478608 29 15.75165344689734 15.218903991355576 50.083132332623 18.946310229124084 30 13.61848113715664 19.4987973411035 48.674566189729056 18.208155332010797 31 15.061337276404133 18.75729707849231 46.29116054074488 19.890205104358678 32 16.48094312544117 19.3904074989713 44.31572221423052 19.812927161357013 33 14.070105479374147 17.195345927519313 43.62306428788877 25.11148430521777 34 15.492722157359301 19.345914137849128 47.062100019737656 18.09926368505391 35 12.788997761950483 19.975010119730634 40.94259018269041 26.29340193562848 36 15.182941312253071 22.00380702593662 43.04197430090225 19.771277360908066 37 14.653704490484106 21.038669079790314 40.8198152689172 23.487811160808374 38 16.589834772398056 22.42816663934618 37.46541728416538 23.51658130409038 39 17.607327688586615 20.02719782149799 41.582224065890316 20.783250424025077 40 16.90547000712563 19.943730952325197 39.5616233051542 23.58917573539497 41 16.10960755517344 22.10533886879811 42.27320930948311 19.511844266545342 42 16.452172982159166 20.619829319452297 42.105773766312836 20.822223932075698 43 18.11950314631625 19.69885019787837 40.52492130027666 21.65672535552872 44 19.221801077876762 20.38615553942346 37.69909106419422 22.692952318505558 45 16.565246335988437 20.364577931961954 37.991141472161544 25.07903425988807 46 19.87314374031935 22.22041944192613 36.63626844550901 21.27016837224551 47 14.707230338450628 19.89957212775282 43.94505571706237 21.448141816734186 48 17.7344515775071 22.057834678727826 37.16031995075622 23.047393793008855 49 15.879948213742093 19.568548211734875 40.65221245747204 23.899291117050993 50 16.57929687107965 19.13866874525376 39.96440531110226 24.317629072564323 51 17.094148621207612 19.48842670805999 37.19293726436082 26.224487406371583 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 68.0 1 482.0 2 896.0 3 25387.5 4 49879.0 5 34258.5 6 18638.0 7 17656.0 8 16674.0 9 16380.5 10 16087.0 11 15252.0 12 14417.0 13 13623.5 14 12830.0 15 11987.5 16 11145.0 17 10363.5 18 9582.0 19 8946.5 20 8311.0 21 7757.0 22 7203.0 23 6754.0 24 6305.0 25 6183.5 26 6255.5 27 6449.0 28 6744.5 29 7040.0 30 7653.5 31 8267.0 32 9102.0 33 9937.0 34 10876.0 35 11815.0 36 12766.0 37 13717.0 38 14769.0 39 15821.0 40 16656.5 41 17492.0 42 19204.0 43 20916.0 44 23217.0 45 25518.0 46 50511.5 47 75505.0 48 61760.5 49 48016.0 50 43697.0 51 39378.0 52 33351.0 53 27324.0 54 24374.5 55 21425.0 56 19556.5 57 17688.0 58 16184.5 59 14681.0 60 12987.0 61 11293.0 62 9715.0 63 8137.0 64 7034.0 65 5931.0 66 5202.5 67 4474.0 68 3866.0 69 3258.0 70 2628.0 71 1998.0 72 1717.5 73 1437.0 74 1233.0 75 815.0 76 601.0 77 425.0 78 249.0 79 207.0 80 165.0 81 132.5 82 100.0 83 73.0 84 46.0 85 33.0 86 20.0 87 17.5 88 15.0 89 8.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 597842.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.86966250658947 #Duplication Level Percentage of deduplicated Percentage of total 1 82.50370609214457 39.494245661738105 2 6.942495904177467 6.646698717727101 3 2.9238780016940447 4.198951594546054 4 1.7507878757260522 3.352384989265393 5 1.235655278743964 2.9575200583979653 6 0.9278863387946611 2.665056352954522 7 0.7446425021161753 2.4952049685054556 8 0.5834949619639509 2.234536552280767 9 0.484984859016377 2.0894455369727853 >10 1.802763509508853 12.885962131217237 >50 0.051632778814714966 1.6984453629649314 >100 0.040950134736352506 4.093553316802337 >500 0.0028487050251375656 0.8741095735399704 >1k 0.0028487050251375656 2.7211944680171776 >5k 3.560881281421957E-4 1.4843498764403396 >10k+ 0.001068264384426587 10.108340838629832 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34825 5.825117673231389 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCG 13805 2.309138534930634 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTC 10671 1.7849197614085328 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGC 8708 1.4565721377889143 No Hit GAACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCT 3705 0.6197289584873595 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCTCTT 2586 0.43255575887943637 No Hit GCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 2518 0.421181516186551 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTC 2289 0.3828770812355104 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCT 1407 0.23534646277779078 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCTCTTCGTA 1310 0.21912144011293952 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTCACCTCTTCGTATGCCG 1124 0.18800954098240003 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTT 1025 0.17144998176775803 No Hit GAATCTTTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTC 828 0.13849813161336944 No Hit GAATCTGTCTCTTATCCACATCTGACGCTCACCTCTTCGTATGCCGTCTTC 679 0.11357515865395874 No Hit CTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGCT 678 0.11340789037906336 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCACCTCTTCGT 675 0.11290608555437724 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 633 0.10588081800877154 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.145021594334289 0.0 2 0.0 0.0 0.0 0.8181091325132728 0.0 3 0.0 0.0 0.0 1.076036812401939 0.0 4 0.0 0.0 0.0 2.152073624803878 0.0 5 0.0 0.0 0.0 4.72666691199347 0.0 6 0.0 0.0 0.0 5.396074548124755 0.0 7 0.0 0.0 0.0 6.068660281479053 0.0 8 0.0 0.0 0.0 6.9811087210333165 0.0 9 0.0 0.0 0.0 7.313303514975528 0.0 10 0.0 0.0 0.0 10.639767697819826 0.0 11 0.0 0.0 0.0 11.421579614680802 0.0 12 0.0 0.0 0.0 13.83291906557251 0.0 13 1.672682748953737E-4 0.0 0.0 14.18284429665363 0.0 14 1.672682748953737E-4 0.0 0.0 14.388417006500045 0.0 15 1.672682748953737E-4 0.0 0.0 14.883363831915457 0.0 16 1.672682748953737E-4 0.0 0.0 15.221245747204112 0.0 17 1.672682748953737E-4 0.0 0.0 15.553775077696114 0.0 18 1.672682748953737E-4 0.0 0.0 15.8904861150605 0.0 19 1.672682748953737E-4 0.0 0.0 16.6823341284152 0.0 20 1.672682748953737E-4 0.0 0.0 16.99462399764486 0.0 21 1.672682748953737E-4 0.0 0.0 17.345887374925148 0.0 22 1.672682748953737E-4 0.0 0.0 17.839496054141396 0.0 23 3.345365497907474E-4 0.0 0.0 18.214344258181928 0.0 24 3.345365497907474E-4 0.0 0.0 18.511579982671005 0.0 25 3.345365497907474E-4 0.0 0.0 18.777871076304443 0.0 26 3.345365497907474E-4 0.0 0.0 19.01756651422951 0.0 27 3.345365497907474E-4 0.0 0.0 19.273152438269644 0.0 28 3.345365497907474E-4 0.0 0.0 19.517865924441576 0.0 29 3.345365497907474E-4 0.0 0.0 19.786833310473337 0.0 30 3.345365497907474E-4 0.0 0.0 20.10481030104944 0.0 31 3.345365497907474E-4 0.0 0.0 20.362905249213004 0.0 32 5.01804824686121E-4 0.0 0.0 20.626018245623424 0.0 33 5.01804824686121E-4 0.0 0.0 20.889465778583638 0.0 34 5.01804824686121E-4 0.0 0.0 21.164789359061423 0.0 35 5.01804824686121E-4 0.0 0.0 21.48059186206389 0.0 36 6.690730995814948E-4 0.0 0.0 21.74705022397222 0.0 37 6.690730995814948E-4 0.0 0.0 22.022875609274692 0.0 38 6.690730995814948E-4 0.0 0.0 22.347710599121505 0.0 39 8.363413744768685E-4 0.0 0.0 22.852526252755744 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCCG 20 7.030568E-4 45.0 40 CTACGGC 80 0.0 45.0 6 CGCCCTA 20 7.030568E-4 45.0 25 TCAAGCG 65 0.0 44.999996 17 CGTTTTT 17980 0.0 44.474415 1 TACGGCT 1285 0.0 43.249027 7 ATGATAC 4965 0.0 42.280964 3 GAATGAT 5325 0.0 42.21127 1 AATGATA 4945 0.0 42.17897 2 ACGGCTG 1330 0.0 42.12406 8 AATGATC 465 0.0 42.096775 2 ATACGGC 3040 0.0 42.039474 6 TGATACC 1920 0.0 41.718746 4 CACCGGT 135 0.0 41.666664 16 TGGGCGA 655 0.0 41.564884 6 GATACCT 1930 0.0 41.50259 5 TGATACG 3130 0.0 41.40575 4 TGATCCG 125 0.0 41.4 4 ACACGTG 60 3.6379788E-12 41.249996 42 TCGTCCC 60 3.6379788E-12 41.249996 38 >>END_MODULE