##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933466.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 222985 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.852016951812903 30.0 28.0 31.0 25.0 33.0 2 27.362966118797228 31.0 25.0 33.0 16.0 34.0 3 27.35404623629392 31.0 25.0 33.0 16.0 34.0 4 32.587039486961004 35.0 32.0 37.0 28.0 37.0 5 34.072798618741174 35.0 33.0 37.0 30.0 37.0 6 32.77761732851985 35.0 32.0 37.0 28.0 37.0 7 33.54354328766509 35.0 33.0 37.0 29.0 37.0 8 32.842765208422094 35.0 32.0 37.0 26.0 37.0 9 34.571953270399355 37.0 34.0 39.0 28.0 39.0 10 34.531663564813776 37.0 32.0 39.0 28.0 39.0 11 34.857994932394554 37.0 34.0 39.0 28.0 39.0 12 34.87675852635827 37.0 34.0 39.0 27.0 39.0 13 34.825858241585756 37.0 33.0 39.0 27.0 39.0 14 35.66391012848398 38.0 34.0 40.0 27.0 41.0 15 35.70735251250084 38.0 33.0 40.0 27.0 41.0 16 36.00860596004215 37.0 34.0 40.0 30.0 41.0 17 35.04742023006032 37.0 32.0 40.0 27.0 41.0 18 34.98003901607731 37.0 33.0 39.0 27.0 40.0 19 34.36106913021055 37.0 32.0 38.0 27.0 40.0 20 33.1215104154988 35.0 31.0 37.0 25.0 39.0 21 34.10128483978743 35.0 33.0 38.0 27.0 40.0 22 34.68432854227863 35.0 33.0 39.0 28.0 40.0 23 34.74687983496648 35.0 33.0 39.0 28.0 40.0 24 34.52191403009171 35.0 33.0 39.0 27.0 40.0 25 33.6033320626948 35.0 33.0 38.0 24.0 40.0 26 33.6167724286387 35.0 32.0 38.0 24.0 40.0 27 34.26258268493397 35.0 33.0 38.0 27.0 40.0 28 33.73574904141534 35.0 33.0 38.0 24.0 40.0 29 33.66437204296253 35.0 33.0 39.0 24.0 40.0 30 33.13980761037738 35.0 32.0 38.0 21.0 40.0 31 33.350445097203846 35.0 33.0 39.0 22.0 40.0 32 32.751207480323785 35.0 32.0 39.0 18.0 40.0 33 31.800228714935983 35.0 30.0 39.0 15.0 40.0 34 31.540704531694956 35.0 30.0 39.0 10.0 40.0 35 30.996322622597933 35.0 28.0 39.0 8.0 40.0 36 30.556606946655606 35.0 25.0 39.0 8.0 40.0 37 30.557902997959506 35.0 25.0 39.0 7.0 40.0 38 30.035289369240083 35.0 23.0 39.0 8.0 40.0 39 29.871202098795884 35.0 23.0 39.0 7.0 40.0 40 29.30692647487499 35.0 21.0 39.0 7.0 40.0 41 28.697854115747695 34.0 21.0 38.0 7.0 40.0 42 29.510034307240396 35.0 22.0 39.0 7.0 40.0 43 29.20561921205462 35.0 21.0 39.0 7.0 40.0 44 29.589393905419648 35.0 22.0 39.0 7.0 40.0 45 29.719528219386955 35.0 23.0 39.0 7.0 40.0 46 29.396300199564994 35.0 22.0 39.0 7.0 40.0 47 29.106177545574816 35.0 21.0 39.0 7.0 40.0 48 29.00350247774514 34.0 20.0 38.0 7.0 40.0 49 29.336466578469405 35.0 21.0 39.0 7.0 40.0 50 29.112738525012894 35.0 20.0 39.0 7.0 40.0 51 28.03591721416239 33.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 11.0 11 14.0 12 18.0 13 23.0 14 33.0 15 63.0 16 124.0 17 248.0 18 527.0 19 949.0 20 1483.0 21 2321.0 22 2938.0 23 4223.0 24 5983.0 25 8318.0 26 11011.0 27 11574.0 28 10812.0 29 10360.0 30 11097.0 31 12486.0 32 14502.0 33 16787.0 34 18786.0 35 20842.0 36 21062.0 37 19698.0 38 14425.0 39 2255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.96226203556293 2.1517142408682197 24.85548355270534 34.03054017086351 2 33.36053994663318 29.07639527322466 26.394600533668182 11.168464246473977 3 9.808731529026616 29.323048635558447 49.61499652442989 11.253223310985044 4 9.229768818530394 2.461600556091217 75.09428885351032 13.214341771868062 5 30.564836199744377 2.8122967912639867 50.08991636208714 16.532950646904503 6 11.037513734107675 25.19810749601991 54.7377626297733 9.02661614009911 7 43.93120613494182 1.0556763907886182 51.8106599098594 3.202457564410162 8 40.887055183084065 20.74579007556562 33.80765522344552 4.559499517904792 9 38.760006278449225 2.5436688566495507 31.794066865484226 26.902257999417 10 30.541516245487365 15.796129784514653 38.772114716236516 14.890239253761465 11 27.308114895620783 14.05610242841447 44.88014888893872 13.755633787026033 12 18.8165123214566 12.110231629930263 46.2111801242236 22.862075924389533 13 17.69760297777877 14.966477565755545 58.050989976904276 9.284929479561406 14 15.539161827028725 24.14646725116039 41.90909702446353 18.405273897347353 15 9.010023095723927 14.531919187389287 60.582101935107744 15.875955781779044 16 10.71641590241496 17.45364037939772 43.56884992264053 28.26109379554679 17 11.241114873197748 18.575688947687063 53.198197188151674 16.98499899096352 18 10.786375765186 16.820862389846848 50.52223243715945 21.8705294078077 19 11.48642285355517 20.780321546292353 44.863555844563535 22.86969975558894 20 15.06199968607754 17.491759535394756 55.69657151826356 11.749669260264143 21 15.12747494226069 28.09202412718344 44.351413772226834 12.429087158329036 22 12.016503352243424 14.40186559634056 49.87465524586855 23.706975805547458 23 12.90938852389174 26.899567235464268 46.43316815032401 13.757876090319975 24 15.86339888333296 16.988138215575038 44.0626051079669 23.085857793125097 25 9.926676682288047 31.8904859071238 41.81940489270578 16.363432517882366 26 12.523712357333453 15.223893983900263 50.93481624324506 21.317577415521225 27 16.785433997802542 20.910823597999865 42.68583088548557 19.617911518712024 28 10.35540507209005 19.327309011816936 52.56541919860081 17.751866717492206 29 22.10731663564814 13.766845303495751 43.93613920218849 20.189698858667622 30 11.680606318810682 25.464941587999192 48.995672354642686 13.858779738547437 31 18.01197389958966 16.237415072762744 38.4312846155571 27.3193264120905 32 20.441285288248086 23.152229970625825 38.005695450366616 18.400789290759466 33 13.636791712447025 21.63194833733211 37.22537390407427 27.5058860461466 34 25.079713882099693 22.97777877435702 34.34356571069802 17.598941632845257 35 13.326905397224028 19.87846716146826 41.37498037984618 25.419647061461532 36 20.623360315716305 20.27445792317869 35.51494495145413 23.587236809650875 37 13.58252797273359 20.311231697199364 43.63208287552974 22.4741574545373 38 15.544543354934188 26.64215081731955 31.540238132609815 26.273067695136444 39 18.404825436688565 26.904051842052155 33.73096845079265 20.960154270466624 40 14.746731842949076 24.141534183913716 35.97058098078346 25.141152992353742 41 15.17635715406866 28.784895845012 36.82758929972868 19.21115770119066 42 14.407247124246025 20.18028118483306 40.42379532255533 24.988676368365585 43 20.247998744310156 20.636365674821178 36.17238827723838 22.94324730363029 44 19.938560889745947 21.230576047716216 37.85097652308451 20.979886539453325 45 15.19743480503173 19.69056214543579 35.116263425790976 29.995739623741507 46 24.710182299257795 24.79314752113371 30.903423997129853 19.59324618247864 47 13.491041998340695 20.374016189429785 46.62107316635648 19.513868645873043 48 20.560575823485884 25.129941475884028 30.515505527277618 23.793977173352467 49 15.72482453976725 18.050541516245488 41.06913021055228 25.155503733434987 50 19.93766396842837 17.982375496109604 37.83752270332085 24.242437832141174 51 19.538533982106422 18.76404242437832 33.26277552301724 28.434648070498014 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 12.0 1 278.0 2 544.0 3 6115.0 4 11686.0 5 8946.0 6 6206.0 7 6124.0 8 6042.0 9 5984.0 10 5926.0 11 5692.0 12 5458.0 13 5098.5 14 4739.0 15 4362.5 16 3986.0 17 3635.0 18 3284.0 19 3083.0 20 2882.0 21 2649.5 22 2417.0 23 2352.0 24 2287.0 25 2261.0 26 2401.0 27 2567.0 28 2617.0 29 2667.0 30 2661.0 31 2655.0 32 3047.5 33 3440.0 34 3631.5 35 3823.0 36 4013.0 37 4203.0 38 4682.5 39 5162.0 40 5460.0 41 5758.0 42 6560.5 43 7363.0 44 8206.5 45 9050.0 46 30270.5 47 51491.0 48 35150.0 49 18809.0 50 16026.0 51 13243.0 52 10669.5 53 8096.0 54 7272.0 55 6448.0 56 5955.5 57 5463.0 58 5007.0 59 4551.0 60 3939.5 61 3328.0 62 2879.5 63 2431.0 64 2039.0 65 1647.0 66 1343.5 67 1040.0 68 897.5 69 755.0 70 616.0 71 477.0 72 402.5 73 328.0 74 268.5 75 183.5 76 158.0 77 109.0 78 60.0 79 42.0 80 24.0 81 24.0 82 24.0 83 14.0 84 4.0 85 4.5 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 222985.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.802296118573 #Duplication Level Percentage of deduplicated Percentage of total 1 86.55023465922204 35.31448303697558 2 4.782212061593924 3.902504652779335 3 1.6563533846982403 2.027490638383748 4 0.9705109745776683 1.583963046841716 5 0.7484914764296626 1.5270085431755498 6 0.5924183638701735 1.450321770522681 7 0.49130057263444815 1.4032334013498666 8 0.46162469911961573 1.5068278135300581 9 0.39567831353109917 1.453012534475413 >10 3.2357693195432113 22.295670112339394 >50 0.061549959882615426 1.8207502746821536 >100 0.03956783135310992 2.9504226741709085 >500 0.003297319279425827 1.032804897190394 >1k 0.006594638558851654 5.60127362827096 >5k 0.003297319279425827 10.69219902684037 >10k+ 0.0010991064264752755 5.43803394847187 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG 12126 5.43803394847187 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC 9707 4.3532076148619865 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTC 8667 3.8868085297217303 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5468 2.452182882256654 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCCAACTT 2481 1.1126308944547838 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTC 2153 0.9655357983720879 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTA 2079 0.9323497096217234 No Hit GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 2016 0.9040966881180348 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCT 1941 0.8704621387088817 No Hit GAACTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT 1820 0.8161983989954481 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCCCACTTCGTATGC 997 0.44711527681234164 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGT 757 0.33948471870305175 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTAT 549 0.24620490167500056 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTT 445 0.19956499316097492 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATG 382 0.17131197165728637 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCCCACTTCGTATGCCG 371 0.1663789044106106 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTCCAACT 336 0.1506827813530058 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCGTCCAACTT 280 0.12556898446083817 No Hit CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT 255 0.11435746799112048 No Hit GTTCTGGGTCACTGAAGGTGACTACTTTTTGCTTGAATGAATTTCCTAATC 249 0.11166670403838823 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12915666973114784 0.0 2 0.0 0.0 0.0 1.218467609928919 0.0 3 0.0 0.0 0.0 1.354799650200686 0.0 4 0.0 0.0 0.0 2.3683207390631655 0.0 5 0.0 0.0 0.0 6.9619032670359 0.0 6 0.0 0.0 0.0 7.283898020046191 0.0 7 0.0 0.0 0.0 8.375899724196694 0.0 8 0.0 0.0 0.0 9.576428907774066 0.0 9 0.0 0.0 0.0 9.757158553265915 0.0 10 0.0 0.0 0.0 16.44191313317039 0.0 11 0.0 0.0 0.0 16.71278337107877 0.0 12 0.0 0.0 0.0 22.535596564791355 0.0 13 0.0 0.0 0.0 22.906473529609617 0.0 14 0.0 0.0 0.0 23.264345135323005 0.0 15 0.0 0.0 0.0 24.523174204542908 0.0 16 0.0 0.0 0.0 25.0595331524542 0.0 17 0.0 0.0 0.0 25.298114222929794 0.0 18 0.0 0.0 0.0 25.470771576563447 0.0 19 0.0 0.0 0.0 27.033656972442092 0.0 20 0.0 0.0 0.0 27.333677153171738 0.0 21 0.0 0.0 0.0 27.494674529676885 0.0 22 0.0 0.0 0.0 27.891113752046103 0.0 23 0.0 0.0 0.0 28.03462116285849 0.0 24 0.0 0.0 0.0 28.15839630468417 0.0 25 0.0 0.0 0.0 28.254366885664954 0.0 26 0.0 0.0 0.0 28.38531739803126 0.0 27 0.0 0.0 0.0 28.612238491378342 0.0 28 0.0 0.0 0.0 28.71403906092338 0.0 29 0.0 0.0 0.0 28.842298809336953 0.0 30 0.0 0.0 0.0 28.976837006973565 0.0 31 0.0 0.0 0.0 29.113169047245332 0.0 32 0.0 0.0 0.0 29.254434154763775 0.0 33 0.0 0.0 0.0 29.38090006054219 0.0 34 0.0 0.0 0.0 29.61589344574747 0.0 35 0.0 0.0 0.0 29.736529362961633 0.0 36 0.0 0.0 0.0 29.86299526874005 0.0 37 0.0 0.0 0.0 30.01861111733973 0.0 38 0.0 0.0 0.0 30.17243312330426 0.0 39 0.0 0.0 0.0 30.326703589927572 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 30 2.157607E-6 45.000004 17 GCGATCT 30 2.157607E-6 45.000004 9 TCACGGG 20 7.0210453E-4 45.0 3 TGATCCG 25 3.880662E-5 45.0 4 GCGACCG 20 7.0210453E-4 45.0 11 AGTCATG 25 3.880662E-5 45.0 26 CTCGTCC 20 7.0210453E-4 45.0 37 TGCTTCG 35 1.2060445E-7 45.0 1 CACGGGG 20 7.0210453E-4 45.0 4 CATTGGG 20 7.0210453E-4 45.0 3 GCTATAA 20 7.0210453E-4 45.0 33 ACCTGGG 20 7.0210453E-4 45.0 3 CCCAGCG 20 7.0210453E-4 45.0 29 GTTAGTC 20 7.0210453E-4 45.0 35 TTCAAGT 20 7.0210453E-4 45.0 22 TACGGTG 35 1.2060445E-7 45.0 7 CCTCGTC 20 7.0210453E-4 45.0 36 TTTCACG 20 7.0210453E-4 45.0 1 TGCATCC 20 7.0210453E-4 45.0 44 CTACGGC 25 3.880662E-5 45.0 6 >>END_MODULE