##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933464.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 408814 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.37367115607587 31.0 28.0 31.0 25.0 34.0 2 28.49631861922537 31.0 26.0 33.0 16.0 34.0 3 28.55550201314045 31.0 26.0 34.0 16.0 34.0 4 33.02770453066676 35.0 32.0 37.0 28.0 37.0 5 34.163984110133214 35.0 33.0 37.0 30.0 37.0 6 33.4694677775223 35.0 32.0 37.0 28.0 37.0 7 33.388472508280046 35.0 32.0 36.0 28.0 37.0 8 33.332366308394526 35.0 33.0 37.0 28.0 37.0 9 34.56605448932766 37.0 34.0 39.0 28.0 39.0 10 34.31357047459236 37.0 32.0 39.0 27.0 39.0 11 34.45899357654092 37.0 32.0 39.0 27.0 39.0 12 34.576751285425644 37.0 33.0 39.0 27.0 39.0 13 34.596554912502995 37.0 33.0 39.0 27.0 39.0 14 35.51455429608575 38.0 34.0 40.0 27.0 41.0 15 35.61805857920717 38.0 33.0 40.0 27.0 41.0 16 35.70816557162915 37.0 34.0 40.0 27.0 41.0 17 35.009111723179736 37.0 33.0 40.0 27.0 41.0 18 34.93050873991595 37.0 33.0 39.0 27.0 40.0 19 34.32183829320914 37.0 32.0 38.0 27.0 40.0 20 33.705039455595944 35.0 32.0 38.0 25.0 40.0 21 34.43611520153419 35.0 33.0 39.0 27.0 40.0 22 35.10778495844076 36.0 33.0 39.0 30.0 40.0 23 35.36260499885033 36.0 34.0 39.0 30.0 40.0 24 35.0085026442343 36.0 34.0 39.0 29.0 40.0 25 34.017746456823886 35.0 33.0 39.0 25.0 40.0 26 34.12443067018253 35.0 33.0 39.0 25.0 40.0 27 34.7058833601589 36.0 33.0 39.0 27.0 40.0 28 34.470167362174486 35.0 33.0 39.0 25.0 40.0 29 34.60157186397726 36.0 33.0 39.0 25.0 40.0 30 33.978491441095464 35.0 33.0 39.0 24.0 40.0 31 34.01372751422407 35.0 33.0 39.0 24.0 40.0 32 33.60211245211759 36.0 33.0 39.0 21.0 40.0 33 33.28773231836483 36.0 33.0 39.0 18.0 41.0 34 32.93115695646431 36.0 32.0 40.0 15.0 41.0 35 32.61977329543509 36.0 32.0 40.0 12.0 41.0 36 32.18990298766676 36.0 31.0 40.0 10.0 41.0 37 32.07472102227419 36.0 31.0 40.0 10.0 41.0 38 31.909022195913057 36.0 30.0 40.0 10.0 41.0 39 31.591197953103368 36.0 30.0 39.0 10.0 40.0 40 31.16725454607719 35.0 29.0 39.0 8.0 40.0 41 30.705575151535907 35.0 26.0 39.0 8.0 40.0 42 30.98976796293669 35.0 28.0 39.0 8.0 40.0 43 30.90181598477547 35.0 27.0 39.0 8.0 40.0 44 31.13557265651372 35.0 29.0 39.0 8.0 40.0 45 31.355207991898517 36.0 29.0 39.0 8.0 40.0 46 31.14271526904656 35.0 29.0 39.0 8.0 40.0 47 30.953783383152242 35.0 28.0 39.0 8.0 40.0 48 30.818095759929943 35.0 28.0 39.0 8.0 40.0 49 31.026713860092855 35.0 29.0 39.0 8.0 40.0 50 30.894648911240807 35.0 28.0 39.0 8.0 40.0 51 29.36383538724212 34.0 24.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 14.0 10 29.0 11 32.0 12 31.0 13 39.0 14 67.0 15 93.0 16 175.0 17 364.0 18 699.0 19 1286.0 20 1911.0 21 2933.0 22 4064.0 23 5853.0 24 8136.0 25 11987.0 26 15565.0 27 17013.0 28 16820.0 29 16919.0 30 18402.0 31 21699.0 32 25843.0 33 30565.0 34 34660.0 35 40123.0 36 44698.0 37 46750.0 38 36457.0 39 5574.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.00865430244561 2.549570220197938 33.40516714202547 31.036608335330985 2 31.102897650276162 20.769836649429816 33.6407265895982 14.486539110695817 3 13.879661655422758 20.891163218480777 51.34217517012627 13.886999955970197 4 12.303639307851492 3.200966698792116 67.83916402080163 16.656229972554755 5 25.986634508602936 3.708532486656523 51.21228725043663 19.092545754303913 6 14.995083338633217 18.407637703209772 55.05706751725724 11.540211440899775 7 56.06168086220139 1.4192273258743586 39.578390172547905 2.9407016393763423 8 54.4059156486813 14.253425763305563 27.527922233582995 3.8127363544301325 9 50.97941851306462 3.25771622302563 26.517682858219143 19.24518240569061 10 33.92863258107599 18.54486392344685 33.44699545514586 14.079508040331302 11 29.405548733653937 16.01755321490947 39.56395818147128 15.012939869965313 12 21.865689531180436 14.953744245549322 42.40314666327475 20.7774195599955 13 21.081469812677646 15.343652614636486 50.95887127153179 12.61600630115407 14 18.209748198447215 22.200560646161822 41.41590062962619 18.173790525764772 15 13.322440033854027 15.657976488085046 53.68920829521494 17.330375182845987 16 16.44513152680681 18.44873218627542 40.071768579353936 25.03436770756383 17 17.619748834433263 18.6676581526073 46.37757023976674 17.335022773192698 18 17.374404986130614 17.362663705254715 44.21521767845524 21.047713630159436 19 16.976669096459513 20.09006540871888 41.21140665437093 21.72185884045067 20 18.37045698043609 20.52473741114541 47.49079043281297 13.614015175605532 21 19.041666870508347 25.25011374365849 41.67518724896897 14.033032136864199 22 16.391561932810518 15.637184636533974 46.26260353119022 21.708649899465282 23 16.934840783339123 24.06791352546635 43.76537985489733 15.231865836297192 24 19.0766461031178 19.038976160307623 40.13316569393416 21.751212042640418 25 16.48622600987246 28.616681424804437 37.72375701419227 17.173335551130833 26 16.239414501460324 16.659165292773732 43.95593105911246 23.14548914665349 27 19.340335702789044 21.030346318863835 39.493021276179384 20.136296702167733 28 13.97897332283141 20.391424951200303 45.91599113533294 19.71361059063535 29 19.219742963792825 18.26772077277197 42.13407564320204 20.378460620233163 30 17.28610076954312 26.34816811557334 41.580278561888775 14.78545255299476 31 24.533651000210366 17.047606001751408 37.648661738590164 20.770081259448062 32 21.906050184191344 24.388841869407603 35.75538019735136 17.94972774904969 33 20.206499777404883 22.160933823205664 33.71704491529155 23.9155214840979 34 24.63320727763726 20.742929547422545 38.68311750576056 15.940745669179627 35 17.73471554300978 29.531767503069855 32.7119423503109 20.021574603609466 36 26.626045096302963 22.65431223001169 34.094967393484566 16.624675280200776 37 18.436746295381273 27.35963054102844 33.986849765418995 20.216773398171295 38 25.000122305009125 26.89658377648515 29.111038271683455 18.99225564682227 39 25.42721139686997 21.427592988498436 31.14081220310459 22.004383411527005 40 19.88385916333589 29.304035576081056 33.14221137240897 17.669893888174084 41 27.197209488911827 23.9098954536782 29.31553224693871 19.577362810471264 42 18.341103778246342 25.943827755409547 36.73700020058022 18.97806826576389 43 24.992784004461686 21.22750199357165 32.02189748883355 21.757816513133115 44 22.61615306716502 22.331182395906207 33.67888575244488 21.373778784483896 45 19.96947266972266 20.715777835397027 32.758173643759754 26.556575851120556 46 25.36361279212551 23.942673196123422 30.298130690240548 20.395583321510514 47 16.23378847104062 23.057184930065997 41.899250025684054 18.809776573209334 48 21.504645144246528 25.69359170674194 30.323080912101837 22.478682236909695 49 18.71095412583718 21.729441751016353 38.67186544492116 20.887738678225308 50 21.887704432822748 20.651934620634325 34.552388127608154 22.90797281893477 51 19.768158624704633 21.069973141819997 32.4428713302382 26.71899690323717 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 44.0 1 537.5 2 1031.0 3 11359.0 4 21687.0 5 15673.5 6 9660.0 7 9110.0 8 8560.0 9 8144.5 10 7729.0 11 7339.5 12 6950.0 13 6422.5 14 5895.0 15 5519.0 16 5143.0 17 4628.5 18 4114.0 19 3983.0 20 3852.0 21 3573.5 22 3295.0 23 3204.0 24 3113.0 25 3315.0 26 3804.5 27 4092.0 28 4533.0 29 4974.0 30 5380.5 31 5787.0 32 6225.5 33 6664.0 34 7376.5 35 8089.0 36 8472.5 37 8856.0 38 9420.0 39 9984.0 40 10790.5 41 11597.0 42 12498.0 43 13399.0 44 15352.5 45 17306.0 46 45276.0 47 73246.0 48 50398.5 49 27551.0 50 25464.0 51 23377.0 52 21069.0 53 18761.0 54 18338.0 55 17915.0 56 17299.0 57 16683.0 58 15805.0 59 14927.0 60 13341.5 61 11756.0 62 10441.5 63 9127.0 64 7930.0 65 6733.0 66 5814.0 67 4895.0 68 3996.5 69 3098.0 70 2548.0 71 1998.0 72 1709.0 73 1420.0 74 1180.0 75 724.0 76 508.0 77 405.0 78 302.0 79 216.0 80 130.0 81 93.0 82 56.0 83 41.5 84 27.0 85 18.5 86 10.0 87 10.0 88 10.0 89 6.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 408814.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.34452840079036 #Duplication Level Percentage of deduplicated Percentage of total 1 79.43206792319474 34.42945524030423 2 6.535261809622909 5.665356822276016 3 3.3241808687977032 4.322551562308981 4 2.4513595237321804 4.250120899878297 5 1.9020925302532865 4.122265184924738 6 1.4696795809262417 3.82215410013115 7 1.1758688038567526 3.5677235135060688 8 0.8973430224666546 3.1115928098045584 9 0.6797195094966392 2.6515909425553534 >10 2.038565496641173 12.87435946410065 >50 0.05745426686172426 1.7064911675351617 >100 0.028442706367190224 2.3192105074173868 >500 0.002275416509375218 0.7244142537521031 >1k 0.003413124764062827 3.7840658789426564 >5k 0.0 0.0 >10k+ 0.002275416509375218 12.648647652562673 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGC 14272 3.4910741804341336 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCG 14091 3.4467997671312625 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC 12285 3.005034074175542 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10651 2.6053413043584612 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGCAGAGT 2915 0.71303820319265 No Hit GAACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCT 2728 0.6672961297802913 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTC 2608 0.6379429275905424 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTA 2391 0.5848625536307465 No Hit GCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC 2390 0.5846179436124986 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCT 2315 0.5662721922439056 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGT 941 0.23017802717128083 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTT 771 0.18859432406913657 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTAT 648 0.15850729182464396 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATG 578 0.14138459054729044 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCTAGCAGAGT 460 0.11252060839403738 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTT 427 0.10444847779185644 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09123953680646944 0.0 2 0.0 0.0 0.0 0.8101483804370692 0.0 3 0.0 0.0 0.0 0.9182660085026443 0.0 4 0.0 0.0 0.0 1.74749397036305 0.0 5 0.0 0.0 0.0 5.368945290523318 0.0 6 0.0 0.0 0.0 5.659541992201833 0.0 7 0.0 0.0 0.0 6.370378705230252 0.0 8 0.0 0.0 0.0 7.197405176926426 0.0 9 0.0 0.0 0.0 7.3312068569080315 0.0 10 0.0 0.0 0.0 11.377301168746667 0.0 11 0.0 0.0 0.0 11.566873932888795 0.0 12 0.0 0.0 0.0 15.74285616441707 0.0 13 0.0 0.0 0.0 16.0197547050737 0.0 14 0.0 0.0 0.0 16.246263581971263 0.0 15 0.0 0.0 0.0 17.0133605991967 0.0 16 0.0 0.0 0.0 17.365109805437193 0.0 17 0.0 0.0 0.0 17.516768016750895 0.0 18 0.0 0.0 0.0 17.63393621549164 0.0 19 0.0 0.0 0.0 18.605282597954083 0.0 20 0.0 0.0 0.0 18.805862812917365 0.0 21 0.0 0.0 0.0 18.924009451731106 0.0 22 0.0 0.0 0.0 19.185986781274615 0.0 23 0.0 0.0 0.0 19.316853141037246 0.0 24 0.0 0.0 0.0 19.429129139413035 0.0 25 0.0 0.0 0.0 19.526973146712198 0.0 26 0.0 0.0 0.0 19.64218446530696 0.0 27 0.0 0.0 0.0 19.816836018335966 0.0 28 0.0 0.0 0.0 19.918349175908848 0.0 29 0.0 0.0 0.0 20.044812555343018 0.0 30 0.0 0.0 0.0 20.191333956273514 0.0 31 0.0 0.0 0.0 20.318286555744177 0.0 32 0.0 0.0 0.0 20.45233284574403 0.0 33 0.0 0.0 0.0 20.583688425543155 0.0 34 0.0 0.0 0.0 20.80628354214875 0.0 35 0.0 0.0 0.0 20.983136585341988 0.0 36 0.0 0.0 0.0 21.12672266605351 0.0 37 0.0 0.0 0.0 21.288654498133624 0.0 38 0.0 0.0 0.0 21.487033222932677 0.0 39 0.0 0.0 0.0 21.84563150968411 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTAGG 65 0.0 45.000004 31 CGCCGGT 65 0.0 45.000004 28 ATAGGCC 20 7.027948E-4 45.0 29 CGTGAAC 20 7.027948E-4 45.0 33 CCAATCC 20 7.027948E-4 45.0 12 TACGAAT 20 7.027948E-4 45.0 12 CTACCGA 20 7.027948E-4 45.0 15 AGCTACG 20 7.027948E-4 45.0 9 CGATCCA 20 7.027948E-4 45.0 34 CACCCGT 80 0.0 45.0 16 CGGGTAT 60 0.0 44.999996 6 CGATTAA 30 2.162058E-6 44.999996 19 CACCGTT 30 2.162058E-6 44.999996 16 CGTTTTT 7750 0.0 44.216125 1 TACGGCT 1675 0.0 43.25373 7 ACGGCTG 1690 0.0 42.736687 8 GATACCT 1620 0.0 42.5 5 CCGATGA 365 0.0 41.91781 18 TGATACC 1650 0.0 41.863636 4 ATACCTG 1665 0.0 41.62162 6 >>END_MODULE