SRR2933463.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933463.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	356493
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20621	5.78440530389096	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCG	6028	1.6909167921950783	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGC	5624	1.5775905838263302	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC	3146	0.8824857711091101	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGCAGAGT	1244	0.3489549584423818	No Hit
GCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCTGC	965	0.27069255216792476	No Hit
GAACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTCT	767	0.21515148965056816	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTC	740	0.20757770839820136	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTA	702	0.196918312561537	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTAGCAGAGTCGTATGCCG	475	0.13324244795830492	No Hit
GAATCTTTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC	454	0.12735172920646406	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCT	418	0.11725335420330835	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTTTCG	25	3.8853737E-5	45.0	1
TTCTACG	20	7.026732E-4	45.0	1
TCGTTCA	35	1.208773E-7	45.0	16
TAGGGTA	20	7.026732E-4	45.0	5
CGAATAG	20	7.026732E-4	45.0	26
GATCTCG	20	7.026732E-4	45.0	12
CACGTGA	20	7.026732E-4	45.0	43
TATACGG	20	7.026732E-4	45.0	27
TCTACGG	30	2.161274E-6	44.999996	2
CGTTTTT	8570	0.0	44.47491	1
ACGGCTG	890	0.0	41.966293	8
GATACCT	880	0.0	41.676136	5
TACGGCT	905	0.0	41.519333	7
GAATGAT	2840	0.0	41.27641	1
AATGATA	2710	0.0	41.014763	2
ATGATAC	2750	0.0	40.99091	3
TGATACC	895	0.0	40.726257	4
ATACGGC	1920	0.0	40.66406	6
GCGACCA	705	0.0	40.531918	11
TGATACG	1940	0.0	40.476807	4