##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933459.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 437538 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.74655229945742 30.0 25.0 31.0 16.0 33.0 2 27.587512398923064 31.0 26.0 33.0 16.0 34.0 3 27.74530440784572 31.0 25.0 33.0 16.0 34.0 4 31.400246378600258 35.0 28.0 35.0 19.0 37.0 5 33.51937203168639 35.0 33.0 37.0 28.0 37.0 6 31.812784261024184 35.0 32.0 37.0 17.0 37.0 7 32.316710777121074 35.0 32.0 35.0 26.0 37.0 8 32.322260009416325 35.0 32.0 35.0 21.0 37.0 9 32.92893874360627 35.0 31.0 37.0 25.0 39.0 10 31.91559133149578 35.0 28.0 39.0 17.0 39.0 11 32.66459370386115 35.0 30.0 39.0 17.0 39.0 12 33.41235961219368 35.0 31.0 39.0 25.0 39.0 13 33.617452655540774 35.0 32.0 39.0 26.0 39.0 14 33.66636726410049 36.0 32.0 40.0 21.0 41.0 15 34.092135997330516 36.0 32.0 40.0 25.0 41.0 16 34.22561697498274 36.0 32.0 40.0 25.0 41.0 17 32.18995150135531 35.0 27.0 39.0 18.0 41.0 18 32.892957868802256 36.0 30.0 39.0 23.0 39.0 19 32.72988403292971 36.0 30.0 37.0 21.0 39.0 20 31.987751920976006 34.0 30.0 36.0 23.0 39.0 21 32.52701936746065 35.0 31.0 37.0 23.0 39.0 22 32.90141884819147 34.0 31.0 37.0 25.0 39.0 23 33.692881532575456 35.0 32.0 38.0 26.0 40.0 24 32.232151264575876 35.0 31.0 37.0 21.0 39.0 25 31.393513249134934 34.0 29.0 37.0 18.0 39.0 26 30.74328858293451 33.0 25.0 37.0 19.0 39.0 27 32.43529247745339 34.0 30.0 37.0 22.0 39.0 28 32.21176217837079 35.0 30.0 37.0 21.0 39.0 29 32.35390983183175 35.0 30.0 38.0 21.0 40.0 30 31.488197596551615 34.0 30.0 37.0 18.0 40.0 31 31.664890820911555 34.0 30.0 37.0 20.0 39.0 32 31.636744694175135 35.0 30.0 37.0 18.0 39.0 33 31.262566908474234 35.0 30.0 38.0 15.0 40.0 34 30.327098446306376 35.0 26.0 38.0 10.0 40.0 35 29.696501789558848 35.0 24.0 38.0 8.0 40.0 36 28.952342425115077 34.0 22.0 38.0 7.0 40.0 37 29.129245916926074 35.0 22.0 38.0 7.0 40.0 38 28.880092700519725 34.0 22.0 38.0 7.0 40.0 39 28.68418971609323 34.0 21.0 38.0 7.0 40.0 40 28.427149184756523 33.0 21.0 37.0 7.0 40.0 41 27.64143685805576 33.0 18.0 37.0 7.0 39.0 42 28.37812030040819 33.0 21.0 38.0 7.0 40.0 43 28.478703564033296 34.0 21.0 38.0 7.0 40.0 44 28.4946861758293 34.0 20.0 38.0 7.0 40.0 45 28.64237391952242 34.0 20.0 38.0 7.0 40.0 46 28.379427615429975 34.0 20.0 38.0 7.0 40.0 47 28.38627959171546 34.0 20.0 38.0 7.0 40.0 48 28.230366276757675 34.0 20.0 38.0 7.0 40.0 49 28.06908199973488 34.0 19.0 37.0 7.0 40.0 50 28.182212744950153 34.0 20.0 38.0 7.0 40.0 51 26.381985107579226 31.0 17.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 13.0 10 14.0 11 22.0 12 45.0 13 57.0 14 91.0 15 197.0 16 437.0 17 928.0 18 1658.0 19 2766.0 20 4063.0 21 5998.0 22 8385.0 23 11251.0 24 15166.0 25 20740.0 26 24951.0 27 25418.0 28 24092.0 29 24918.0 30 28008.0 31 32001.0 32 36568.0 33 40231.0 34 43130.0 35 41237.0 36 28443.0 37 13954.0 38 2710.0 39 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.37322015459229 2.249633174718539 31.556801923490074 36.8203447471991 2 39.91744717030292 18.71106052502868 29.119985007016535 12.25150729765186 3 10.488231879288199 18.621011203598318 58.18603184180574 12.704725075307744 4 10.083924139160484 2.4882410213512887 72.67551618373719 14.752318655751044 5 22.13636301304115 2.876778702649827 59.22434165718178 15.762516627127244 6 12.310016501423876 15.519109197372572 61.6504166495253 10.520457651678255 7 46.32146236441177 1.0492802910832888 49.54563946445795 3.0836178800469902 8 45.87075865410547 12.181570515018123 36.79657538316672 5.151095447709684 9 42.45368402287344 2.3741937843113057 36.42906444697375 18.743057745841504 10 25.974886752693482 15.118686834057844 43.71346031658965 15.192966096659033 11 21.605437699125563 15.650297802705138 49.07962279847693 13.664641699692371 12 16.63786916793513 13.51928289657127 51.43576100818672 18.407086927306885 13 15.45511475574693 15.927530865890505 58.209115551106414 10.408238827256147 14 14.088147772307776 20.03277429617542 48.780448783877056 17.09862914763975 15 10.137176656656107 16.02466528621514 59.25291060433609 14.585247452792672 16 11.127262089235677 16.41183165805027 48.336373069310554 24.1245331834035 17 12.54885289963386 17.833422468448454 53.48015486654874 16.13756976536895 18 12.323272492903474 16.095287723580583 52.70605067445571 18.875389109060244 19 12.812601419762398 20.086941019979978 47.976404335166315 19.124053225091306 20 14.67735373841815 17.887589192253014 55.45735456120383 11.977702508125008 21 14.91299041454685 23.35248595550558 48.284263309701096 13.450260320246471 22 12.244879301912063 15.502653483811693 51.66568389488456 20.58678331939169 23 13.424662543596213 22.74956689476114 49.350684969076966 14.475085592565673 24 15.123257865602529 16.942756971965863 47.738253591688036 20.19573157074357 25 11.141203735446977 24.883095868244588 46.36191599358227 17.61378440272616 26 12.447604550919007 16.512165800456188 51.809899940119486 19.230329708505316 27 15.66903903203836 18.716774314459546 46.94106569029433 18.67312096320777 28 10.466290927873693 18.184934794235012 53.63122745910069 17.7175468187906 29 16.57821720627694 14.253847665802741 48.59372214527652 20.574212982643793 30 15.120286695098484 20.568270641635696 49.14201737906193 15.169425284203886 31 14.643528104987451 15.529851121502588 48.82273082566543 21.00388994784453 32 16.37252078676595 19.8766735689243 47.644090341867454 16.1067153024423 33 13.334156119011379 17.04994766168881 43.06025990885363 26.55563631044618 34 15.368265156397845 18.32366560161632 42.58830090186452 23.719768340121313 35 16.891332867088117 19.725372424795104 42.45688374495472 20.926410963162056 36 14.47599979887461 21.31654850550124 41.48942491852136 22.71802677710279 37 16.656838948845586 20.110938935589594 45.85201742477224 17.38020469079257 38 15.404833408755353 21.125936490087717 40.38574935205628 23.083480749100648 39 16.32155378504267 20.680260914480574 40.841709748638976 22.156475551837783 40 15.623557268168708 19.644922269608582 43.18299210582852 21.548528356394186 41 15.135828202350424 26.20640950043196 36.75429334137835 21.903468955839266 42 15.37466460056041 20.434110865799084 45.92675379052791 18.2644707431126 43 17.101600318143795 22.75939461258222 36.50197240011153 23.63703266916245 44 19.38048809474834 20.05768641809397 37.762662900136675 22.799162587021012 45 15.55202062449433 18.913328670881157 40.31375560522743 25.22089509939708 46 20.173333516174598 23.47521815248047 37.02558406355562 19.32586426778931 47 13.742349235952078 18.93664093175907 45.67169023033428 21.649319601954573 48 17.889646156448123 21.40545506904543 36.12943332921941 24.575465445287037 49 15.043036261993246 18.436341529192894 43.63735264137058 22.883269567443286 50 16.73271807248742 19.147594037546455 38.92279070617866 25.196897183787463 51 17.171994203932 18.7071751482157 36.59659275308659 27.52423789476571 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 39.0 1 254.5 2 470.0 3 16968.0 4 33466.0 5 23679.0 6 13892.0 7 13194.0 8 12496.0 9 12283.5 10 12071.0 11 11626.0 12 11181.0 13 10453.5 14 9726.0 15 9180.5 16 8635.0 17 8122.0 18 7609.0 19 7065.0 20 6521.0 21 6131.0 22 5741.0 23 5484.5 24 5228.0 25 5048.5 26 4901.0 27 4933.0 28 5004.5 29 5076.0 30 5395.0 31 5714.0 32 6251.0 33 6788.0 34 7404.0 35 8020.0 36 8634.0 37 9248.0 38 10129.5 39 11011.0 40 11863.5 41 12716.0 42 14083.5 43 15451.0 44 17649.5 45 19848.0 46 44207.0 47 68566.0 48 54272.5 49 39979.0 50 35705.5 51 31432.0 52 25189.5 53 18947.0 54 16234.5 55 13522.0 56 11569.5 57 9617.0 58 8547.5 59 7478.0 60 6588.5 61 5699.0 62 4776.5 63 3854.0 64 3244.5 65 2635.0 66 2152.5 67 1670.0 68 1418.0 69 1166.0 70 997.0 71 828.0 72 715.5 73 603.0 74 499.5 75 305.0 76 214.0 77 150.5 78 87.0 79 66.0 80 45.0 81 40.0 82 35.0 83 22.5 84 10.0 85 6.0 86 2.0 87 2.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 437538.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.408015808075454 #Duplication Level Percentage of deduplicated Percentage of total 1 85.77175860873876 43.23584163835736 2 6.470588839868316 6.523390890552775 3 2.3864688595291876 3.608914799898814 4 1.263531062592535 2.5476837510863555 5 0.8391464614092693 2.1149854046004517 6 0.6138814663721552 1.8566727996703285 7 0.4573759440320602 1.613878967190107 8 0.35703250640610007 1.4397840181532395 9 0.3136710480893797 1.4230381635562543 >10 1.4221174273533566 11.253911452788909 >50 0.050589455739411295 1.7633220051272356 >100 0.045484097820745986 4.604710588418333 >500 0.0032488641300532843 1.1075449611610806 >1k 0.0032488641300532843 3.7463281502054047 >5k 9.282468943009385E-4 4.401871238750683 >10k+ 9.282468943009385E-4 8.75812117048269 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22791 5.208918996749996 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCG 14644 3.3469092970210585 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGC 9739 2.2258638106861577 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 9076 2.0743341149797274 No Hit GAACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCT 3183 0.727479670337205 No Hit GCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 3058 0.6989107231829007 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTTCCTAT 2947 0.6735414981098784 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTC 2246 0.5133268424685399 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTA 1909 0.43630496094053545 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCT 1433 0.32751441017694466 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCGTTCCTATCGTATGCCG 1237 0.2827183010389955 No Hit CTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGCT 827 0.18901215437287733 TruSeq Adapter, Index 16 (95% over 23bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGT 803 0.1835269165192509 No Hit GAATCTTTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 767 0.17529905973881127 No Hit GAATCTGTCTCTTATCCACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 620 0.14170197788534938 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTT 602 0.13758804949512957 No Hit GAATGACTCTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCT 595 0.13598818845448854 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCCGTTCCTATCGTATGC 520 0.11884682016190594 No Hit GAATCTGTCTCTTATCCCCATCTGACGCCGTTCCTATCGTATGCCGTCTTC 496 0.1133615823082795 No Hit TCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 478 0.10924765391805968 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 469 0.10719068972294978 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCC 463 0.10581938025954318 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCG 460 0.10513372552783988 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGC 442 0.10101979713762003 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22352344253527692 0.0 2 0.0 0.0 0.0 1.269375459960049 0.0 3 0.0 0.0 0.0 1.5804341565761146 0.0 4 0.0 0.0 0.0 2.8744931868774826 0.0 5 0.0 0.0 0.0 5.692077031023591 0.0 6 0.0 0.0 0.0 6.236029784841545 0.0 7 0.0 0.0 0.0 6.947282293195105 0.0 8 0.0 0.0 0.0 7.970279152896434 0.0 9 0.0 0.0 0.0 8.252311799203726 0.0 10 0.0 0.0 0.0 12.747007117096116 0.0 11 0.0 0.0 0.0 13.714237391952242 0.0 12 0.0 0.0 0.0 17.05497579638797 0.0 13 0.0 0.0 0.0 17.48373855527977 0.0 14 0.0 0.0 0.0 17.72074654087188 0.0 15 0.0 0.0 0.0 18.509249482330677 0.0 16 0.0 0.0 0.0 19.026004598457735 0.0 17 0.0 0.0 0.0 19.53338909991818 0.0 18 0.0 0.0 0.0 20.08236998843529 0.0 19 0.0 0.0 0.0 21.3302616001353 0.0 20 0.0 0.0 0.0 21.797421024002485 0.0 21 0.0 0.0 0.0 22.348915979869176 0.0 22 0.0 0.0 0.0 23.060168488222736 0.0 23 0.0 0.0 0.0 23.650745763796515 0.0 24 0.0 0.0 0.0 24.07927997111108 0.0 25 0.0 0.0 0.0 24.45753283143407 0.0 26 0.0 0.0 0.0 24.82390100974087 0.0 27 0.0 0.0 0.0 25.20238242164109 0.0 28 0.0 0.0 0.0 25.581778039850253 0.0 29 0.0 0.0 0.0 25.97694371688859 0.0 30 0.0 0.0 0.0 26.378737389666725 0.0 31 0.0 0.0 0.0 26.790587331843177 0.0 32 0.0 0.0 0.0 27.187809973076625 0.0 33 0.0 0.0 0.0 27.570633864944302 0.0 34 0.0 0.0 0.0 27.93860190429174 0.0 35 0.0 0.0 0.0 28.320740141427716 0.0 36 0.0 0.0 0.0 28.693736315474315 0.0 37 0.0 0.0 0.0 29.07541744945582 0.0 38 0.0 0.0 0.0 29.477211122233953 0.0 39 0.0 0.0 0.0 29.889061064410406 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 25 3.8868307E-5 45.000004 9 CACGACC 50 2.1827873E-11 45.000004 27 GGCGCGA 25 3.8868307E-5 45.000004 8 TATACGG 50 2.1827873E-11 45.000004 27 CAGACGT 25 3.8868307E-5 45.000004 23 ACCGAGG 20 7.028491E-4 45.0 17 GCGATAT 20 7.028491E-4 45.0 9 GATTGTA 20 7.028491E-4 45.0 9 GGCGATA 45 3.8380676E-10 45.0 8 TCGCGCG 20 7.028491E-4 45.0 1 GCGACCG 60 0.0 44.999996 11 AGACGTG 30 2.1624073E-6 44.999996 24 ACGATAT 30 2.1624073E-6 44.999996 13 TACGATA 30 2.1624073E-6 44.999996 12 ACCCGTC 30 2.1624073E-6 44.999996 17 CGTTTTT 12975 0.0 44.53179 1 ACCGGTG 135 0.0 43.333336 17 TGATACC 1905 0.0 43.228344 4 GATACCT 1900 0.0 43.223682 5 ACCCCGT 120 0.0 43.124996 39 >>END_MODULE