SRR2933457.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933457.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	376207
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25990	6.908430730953969	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG	9896	2.6304667377268367	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC	7070	1.8792845428181826	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC	5646	1.500769523161451	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTCCAATT	2128	0.5656460406106213	No Hit
GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC	1869	0.4968009632994601	No Hit
GAACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCT	1719	0.45692929690303474	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTC	1448	0.3848944862801596	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTA	1303	0.34635187543028173	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT	982	0.26102650934193145	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGGTCCAATTCGTATGCCG	825	0.21929416518033953	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGT	616	0.16373964333465352	No Hit
CTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGCT	579	0.15390463229020193	No Hit
GAATCTTTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC	505	0.13423461020129876	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCCATTCGTATGC	467	0.12413378804753765	No Hit
GAATGACTCTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT	422	0.11217228812861005	No Hit
CCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC	411	0.10924836592620552	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	25	3.8857856E-5	45.000004	21
GGCACGT	30	2.1615942E-6	45.000004	11
CGACCGC	30	2.1615942E-6	45.000004	12
GCGTTCG	25	3.8857856E-5	45.000004	1
ACGGGGA	30	2.1615942E-6	45.000004	5
TACGAAT	30	2.1615942E-6	45.000004	12
ACGGATC	25	3.8857856E-5	45.000004	30
AGACACG	25	3.8857856E-5	45.000004	24
CGTGCAC	20	7.0272305E-4	45.0	18
TACGGAT	20	7.0272305E-4	45.0	29
TATTGCG	20	7.0272305E-4	45.0	1
ACGGCTC	20	7.0272305E-4	45.0	30
GCTTACG	20	7.0272305E-4	45.0	1
GCGTGCA	20	7.0272305E-4	45.0	17
GCTACGA	35	1.2090095E-7	45.0	10
ACATACG	20	7.0272305E-4	45.0	17
ACGACCA	20	7.0272305E-4	45.0	28
GTACGGG	20	7.0272305E-4	45.0	3
CGTTTTT	10470	0.0	44.59169	1
GATACCT	1225	0.0	42.612244	5