##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933455.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 735390 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.48913773643917 31.0 28.0 31.0 16.0 33.0 2 28.693082582031302 31.0 30.0 33.0 16.0 34.0 3 28.82519071513075 31.0 30.0 33.0 16.0 34.0 4 32.09366458613797 35.0 30.0 37.0 19.0 37.0 5 33.68888480942085 35.0 33.0 37.0 28.0 37.0 6 32.74539632031983 35.0 33.0 37.0 17.0 37.0 7 32.419982594269705 35.0 32.0 36.0 26.0 37.0 8 33.02882416132936 35.0 32.0 37.0 27.0 37.0 9 33.26113898747603 35.0 32.0 38.0 25.0 39.0 10 32.5483947293273 35.0 30.0 39.0 17.0 39.0 11 33.24690028420294 37.0 31.0 39.0 17.0 39.0 12 33.88721766681625 37.0 31.0 39.0 25.0 39.0 13 34.094541671766 37.0 32.0 39.0 27.0 39.0 14 34.20110009654741 37.0 32.0 40.0 23.0 41.0 15 34.74200356273542 37.0 32.0 40.0 26.0 41.0 16 34.88430220699221 37.0 32.0 40.0 26.0 41.0 17 32.945964726199705 36.0 30.0 40.0 18.0 41.0 18 33.45027400426984 36.0 31.0 39.0 24.0 39.0 19 33.19022423475979 36.0 32.0 37.0 23.0 39.0 20 32.53328166007152 35.0 31.0 36.0 25.0 39.0 21 32.84903384598648 35.0 32.0 37.0 25.0 39.0 22 32.79793442935041 34.0 30.0 37.0 25.0 39.0 23 33.82826935367628 35.0 32.0 38.0 27.0 40.0 24 32.10108377867526 35.0 31.0 37.0 21.0 39.0 25 31.302871945498307 34.0 29.0 37.0 18.0 39.0 26 30.19830838058717 33.0 25.0 36.0 18.0 39.0 27 32.20284474904472 34.0 30.0 37.0 22.0 39.0 28 32.14878635825888 35.0 31.0 37.0 21.0 39.0 29 32.10373951236759 35.0 30.0 38.0 21.0 40.0 30 31.24697643427297 34.0 28.0 37.0 18.0 40.0 31 31.45787677286882 34.0 30.0 37.0 18.0 39.0 32 31.177668991963447 35.0 30.0 37.0 16.0 39.0 33 30.547747453732033 35.0 27.0 38.0 12.0 40.0 34 29.21387155114973 34.0 22.0 38.0 8.0 40.0 35 28.544047376222142 34.0 21.0 38.0 7.0 40.0 36 27.769168740396253 33.0 18.0 38.0 7.0 40.0 37 27.89897333387726 34.0 17.0 38.0 7.0 40.0 38 27.78190076014088 34.0 16.0 38.0 7.0 40.0 39 27.338676076639608 33.0 15.0 37.0 7.0 40.0 40 27.31980309767606 33.0 15.0 38.0 7.0 40.0 41 26.660672568297095 33.0 15.0 37.0 7.0 40.0 42 27.189519846612 33.0 15.0 38.0 7.0 40.0 43 27.26915786181482 33.0 15.0 38.0 7.0 40.0 44 27.229490474442134 33.0 15.0 38.0 7.0 40.0 45 27.363010103482505 33.0 15.0 38.0 7.0 40.0 46 27.13217340458804 33.0 15.0 38.0 7.0 40.0 47 27.194643658466937 33.0 15.0 38.0 7.0 40.0 48 26.89725723765621 33.0 14.0 37.0 7.0 40.0 49 26.70484776785107 33.0 12.0 37.0 7.0 40.0 50 26.886971538911325 33.0 12.0 37.0 7.0 40.0 51 25.582292389072464 31.0 11.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 20.0 10 35.0 11 38.0 12 58.0 13 89.0 14 179.0 15 314.0 16 697.0 17 1436.0 18 2891.0 19 4864.0 20 7734.0 21 10972.0 22 15807.0 23 21763.0 24 30287.0 25 40674.0 26 48624.0 27 46593.0 28 40964.0 29 39672.0 30 41997.0 31 47376.0 32 54220.0 33 60886.0 34 66197.0 35 67608.0 36 50309.0 37 27311.0 38 5665.0 39 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.811011844055535 2.160758237125879 30.310039570839965 45.71819034797862 2 46.247841281496896 12.28395817185439 28.924108296278167 12.54409225037055 3 10.38972517983655 12.244659296427745 64.496253688519 12.869361835216688 4 9.416908035192211 2.4204843688383035 73.17287425719687 14.989733338772623 5 16.992344198316538 2.940480561334802 64.76291491589497 15.304260324453692 6 11.924421055494363 10.289234283849385 67.38560491711881 10.400739743537443 7 46.07364799630128 1.0584859734290648 50.21933939814248 2.6485266321271705 8 46.515182420212405 7.4901752811433395 42.309930785025635 3.684711513618624 9 42.73745903534179 2.3539890398292065 42.15232733651531 12.756224588313684 10 22.448224751492404 15.378914589537523 49.427922598893105 12.744938060076965 11 18.157304287520905 15.385169773861488 53.700349474428535 12.757176464189069 12 14.260732400494975 13.655339343749576 56.48472239220006 15.599205863555394 13 13.874542759624145 14.38841975006459 61.03305728932947 10.70398020098179 14 13.133575381770218 17.13594147323189 54.959409293028195 14.771073851969705 15 10.72437754116863 15.29338174302071 60.885516528644665 13.096724187165993 16 11.849222861338882 15.347502685649792 54.165680795224304 18.637593657787026 17 12.126898652415726 16.189776853098355 57.39498769360475 14.288336800881165 18 12.175308339792492 15.293245760752797 56.271910142917356 16.259535756537346 19 12.436394294184039 18.025945416717658 53.24997620310311 16.287684085995185 20 13.967282666340308 17.035314594976814 57.49343885557323 11.503963883109643 21 14.421735405703096 19.29615578128612 53.86896748663974 12.413141326371042 22 12.75364092522335 14.672894654537046 55.716694543031586 16.85676987720801 23 12.910836426929928 19.304994628700417 54.644066413739644 13.140102530630005 24 13.712995825344375 15.83023973673833 53.767116767973455 16.689647669943838 25 11.739349188865772 20.73933559063898 52.19597764451515 15.325337575980091 26 12.297420416377705 16.239682345422157 55.1946586165164 16.268238621683732 27 13.762765335400266 17.076653204422144 52.296332558234404 16.86424890194319 28 11.135587919335318 17.42830334924326 55.479405485524694 15.956703245896737 29 14.070085260881982 14.583146357714954 52.226165707991676 19.120602673411387 30 11.90796720107698 18.346319639918953 52.72794027658794 17.017772882416132 31 13.254055671140483 18.315587647370783 50.11830457308367 18.312052108405062 32 13.825589143175728 18.72856579502033 49.30417873509295 18.141666326710997 33 12.2630169025959 18.03383238825657 46.949373801656265 22.753776907491265 34 14.412216646949238 21.90973497055984 44.48795877017637 19.190089612314555 35 12.65274208243245 20.85301676661363 44.19600484096874 22.298236309985178 36 14.398754402425922 22.76071200315479 42.11452426603571 20.72600932838358 37 14.637539264879859 22.301091937611336 41.61138987476033 21.449978922748475 38 16.12219366594596 23.49827982431091 40.038211017283345 20.34131549245978 39 17.41456914018412 23.715443506166796 39.40262989706142 19.46735745658766 40 16.932512000435143 21.692027359632306 42.561769945199146 18.813690694733406 41 16.270822284774063 25.109533716803327 41.17148723806416 17.44815676035845 42 16.667346578006228 22.57468826065081 43.33754878363861 17.42041637770435 43 18.075035015433986 21.164144195596894 40.12931913678457 20.631501652184557 44 18.437155794884347 22.435714382844477 38.04049551938427 21.086634302886903 45 16.536803600810455 21.979221909463007 39.066345748514394 22.417628741212145 46 19.32240035899319 23.009015624362583 37.73834292008323 19.93024109656101 47 15.628849997960264 20.683310896259126 43.527787976447875 20.160051129332736 48 17.741062565441467 22.788180421273065 37.575572145392236 21.895184867893228 49 15.872666204326954 20.785841526264974 41.7640979616258 21.577394307782267 50 16.92149743673425 20.006935095663525 40.69174179686969 22.379825670732536 51 17.341682644583145 20.268700961394632 38.342648118685325 24.046968275336898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 96.0 1 535.0 2 974.0 3 31761.5 4 62549.0 5 44406.5 6 26264.0 7 25301.5 8 24339.0 9 24160.5 10 23982.0 11 23245.0 12 22508.0 13 21705.5 14 20903.0 15 19827.0 16 18751.0 17 17713.0 18 16675.0 19 15566.0 20 14457.0 21 13355.5 22 12254.0 23 11566.5 24 10879.0 25 10341.0 26 9601.5 27 9400.0 28 9697.5 29 9995.0 30 10453.0 31 10911.0 32 11961.5 33 13012.0 34 14302.5 35 15593.0 36 16684.0 37 17775.0 38 18734.0 39 19693.0 40 21181.5 41 22670.0 42 24385.0 43 26100.0 44 28744.5 45 31389.0 46 55141.5 47 78894.0 48 66188.0 49 53482.0 50 48220.0 51 42958.0 52 36710.0 53 30462.0 54 26992.0 55 23522.0 56 21137.0 57 18752.0 58 16363.5 59 13975.0 60 12297.0 61 10619.0 62 9098.5 63 7578.0 64 6402.5 65 5227.0 66 4196.5 67 3166.0 68 2660.5 69 2155.0 70 1700.5 71 1246.0 72 1052.0 73 858.0 74 789.0 75 560.0 76 400.0 77 297.5 78 195.0 79 154.5 80 114.0 81 83.0 82 52.0 83 38.0 84 24.0 85 16.0 86 8.0 87 6.5 88 5.0 89 4.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 735390.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.214435941788494 #Duplication Level Percentage of deduplicated Percentage of total 1 82.44931304240825 43.874936873397004 2 7.459830860922835 7.939413829703101 3 3.4751565635089845 5.547854890096041 4 2.09631613851843 4.462171234677056 5 1.337538574211467 3.5588180388523614 6 0.9356304717238649 2.987342868164098 7 0.6287235117276876 2.3420016927950535 8 0.4090102801941945 1.741220108394154 9 0.2975363342611564 1.4249905379905388 >10 0.8236998719990711 6.652999862713567 >50 0.044012853382610566 1.6717735832402287 >100 0.03567900667698107 3.807531848645341 >500 0.004166891290720413 1.4666633746124444 >1k 0.002343876351030232 2.4549253536695494 >5k 2.604307056700258E-4 1.1207508939328015 >10k+ 7.812921170100776E-4 8.946605009116599 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40040 5.444730007207061 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCG 13767 1.872067882348142 No Hit GAATCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCTTC 10749 1.4616733977889282 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGC 8087 1.099688600606481 No Hit GAACTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCTTCT 3534 0.4805613348019418 RNA PCR Primer, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCTTCTGC 2803 0.3811582969580767 RNA PCR Primer, Index 14 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCACCATTT 2502 0.3402276343164851 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTC 2297 0.31235126939447094 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCACCCTTTCGTATGC 1517 0.20628510042290488 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCACCATTTCGTA 1381 0.1877915119868369 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCT 1331 0.1809923985912237 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCTT 1181 0.16059505840438407 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCCACCATTTCGTATGCCG 1168 0.15882728892152462 No Hit GAATCTTTCTCTTATACACATCTGACGCCCACCATTTCGTATGCCGTCTTC 913 0.12415181060389725 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCC 862 0.11721671494037177 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCACCATTTCGT 813 0.11055358381267084 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCACCCTTTCGTATGCCG 757 0.10293857680958403 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 748 0.10171473639837365 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10089884279090007 0.0 2 0.0 0.0 0.0 0.652034974639307 0.0 3 0.0 0.0 0.0 0.840914344769442 0.0 4 0.0 0.0 0.0 1.691483430560655 0.0 5 0.0 0.0 0.0 3.7037490311263412 0.0 6 0.0 0.0 0.0 4.296223772420077 0.0 7 0.0 0.0 0.0 4.849671602822992 0.0 8 0.0 0.0 0.0 5.550116264839065 0.0 9 0.0 0.0 0.0 5.826840180040523 0.0 10 0.0 0.0 0.0 8.44640258910238 0.0 11 0.0 0.0 0.0 8.981628795605053 0.0 12 0.0 0.0 0.0 10.930798623859449 0.0 13 0.0 0.0 0.0 11.198275744842872 0.0 14 0.0 0.0 0.0 11.357918927371871 0.0 15 0.0 0.0 0.0 11.765321802037015 0.0 16 0.0 0.0 0.0 12.028175525911422 0.0 17 0.0 0.0 0.0 12.257033682807762 0.0 18 0.0 0.0 0.0 12.468486109411332 0.0 19 1.3598226791226425E-4 0.0 0.0 13.107058839527326 0.0 20 1.3598226791226425E-4 0.0 0.0 13.328981900760141 0.0 21 1.3598226791226425E-4 0.0 0.0 13.560423720746815 0.0 22 1.3598226791226425E-4 0.0 0.0 13.888956880022844 0.0 23 1.3598226791226425E-4 0.0 0.0 14.143787650090427 0.0 24 1.3598226791226425E-4 0.0 0.0 14.356327934837298 0.0 25 1.3598226791226425E-4 0.0 0.0 14.535688546213574 0.0 26 1.3598226791226425E-4 0.0 0.0 14.704034593888958 0.0 27 1.3598226791226425E-4 0.0 0.0 14.875644215994233 0.0 28 1.3598226791226425E-4 0.0 0.0 15.038279008417302 0.0 29 1.3598226791226425E-4 0.0 0.0 15.223622839581719 0.0 30 1.3598226791226425E-4 0.0 0.0 15.425284542895607 0.0 31 1.3598226791226425E-4 0.0 0.0 15.60804471096969 0.0 32 2.719645358245285E-4 0.0 0.0 15.799507744190157 0.0 33 2.719645358245285E-4 0.0 0.0 15.98648336256952 0.0 34 2.719645358245285E-4 0.0 0.0 16.177946395789988 0.0 35 4.0794680373679274E-4 0.0 0.0 16.373080950244088 0.0 36 4.0794680373679274E-4 0.0 0.0 16.565767823875767 0.0 37 4.0794680373679274E-4 0.0 0.0 16.766613633582182 0.0 38 4.0794680373679274E-4 0.0 0.0 16.962564081643755 0.0 39 4.0794680373679274E-4 0.0 0.0 17.188974557717675 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCTTA 20 7.0316275E-4 45.0 18 TCTAGCG 20 7.0316275E-4 45.0 1 CGTTTTT 26215 0.0 44.46786 1 ACGGCTG 1195 0.0 42.17573 8 TGATACC 1845 0.0 41.95122 4 GATACCT 1840 0.0 41.942936 5 CTTCGCG 65 0.0 41.53846 1 ACCGGTC 65 0.0 41.53846 17 TACGGCT 1220 0.0 41.4959 7 CGACCAC 1000 0.0 41.4 12 GCGATTT 250 0.0 41.4 9 GAATGAT 5085 0.0 41.283184 1 GCGACCA 1025 0.0 41.26829 11 TTGCGCG 60 3.6379788E-12 41.249996 1 ACGGGAG 55 6.002665E-11 40.909092 5 CGATGAA 165 0.0 40.909092 19 ATGATAC 4895 0.0 40.817158 3 CGGGCGA 250 0.0 40.500004 6 AATGATA 4925 0.0 40.477158 2 ACGTGAG 245 0.0 40.408165 44 >>END_MODULE