##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933454.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 406125 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.260690674053556 31.0 28.0 31.0 25.0 34.0 2 28.269862726992923 31.0 25.0 33.0 16.0 34.0 3 28.26486919052016 31.0 25.0 33.0 16.0 34.0 4 32.9812594644506 35.0 32.0 37.0 28.0 37.0 5 34.20638473376424 35.0 33.0 37.0 30.0 37.0 6 33.34443582640812 35.0 32.0 37.0 28.0 37.0 7 33.60893567251462 35.0 32.0 37.0 29.0 37.0 8 33.298917820867956 35.0 32.0 37.0 28.0 37.0 9 34.709572176054174 37.0 34.0 39.0 28.0 39.0 10 34.76066728224069 37.0 33.0 39.0 28.0 39.0 11 35.00933702677747 37.0 34.0 39.0 28.0 39.0 12 35.08409233610342 37.0 34.0 39.0 27.0 39.0 13 35.134160664819944 37.0 34.0 39.0 27.0 39.0 14 35.92031271160357 38.0 34.0 40.0 27.0 41.0 15 36.17518990458603 38.0 34.0 40.0 28.0 41.0 16 36.22395814096645 38.0 34.0 40.0 30.0 41.0 17 35.401019390581716 37.0 33.0 40.0 27.0 41.0 18 35.17806586642044 37.0 33.0 39.0 27.0 40.0 19 34.54103047091413 37.0 33.0 38.0 27.0 40.0 20 33.710763927362265 35.0 32.0 38.0 26.0 40.0 21 34.276072637734686 35.0 33.0 38.0 27.0 40.0 22 34.75489073561096 35.0 33.0 39.0 29.0 40.0 23 34.981714989227456 35.0 33.0 39.0 29.0 40.0 24 34.554287473068634 35.0 33.0 39.0 27.0 40.0 25 33.52566081871345 35.0 33.0 38.0 24.0 40.0 26 33.55125884887658 35.0 32.0 38.0 24.0 40.0 27 34.27846106494306 35.0 33.0 38.0 26.0 40.0 28 33.89001662049861 35.0 33.0 39.0 24.0 40.0 29 33.86032379193598 35.0 33.0 39.0 24.0 40.0 30 33.20790889504463 35.0 32.0 39.0 21.0 40.0 31 33.31162080640197 35.0 33.0 39.0 22.0 40.0 32 32.72826592797784 35.0 32.0 39.0 18.0 40.0 33 31.980419821483533 35.0 31.0 39.0 15.0 40.0 34 31.60855647891659 35.0 30.0 39.0 10.0 40.0 35 31.050976915974147 35.0 27.0 39.0 8.0 41.0 36 30.469564789165897 35.0 24.0 39.0 7.0 40.0 37 30.370425361649737 35.0 23.0 39.0 7.0 40.0 38 30.069980917205292 35.0 23.0 39.0 7.0 40.0 39 29.765030470914127 35.0 22.0 39.0 7.0 40.0 40 29.411063096337333 35.0 21.0 39.0 7.0 40.0 41 29.004510926438904 35.0 21.0 39.0 7.0 40.0 42 29.34219267466913 35.0 21.0 39.0 7.0 40.0 43 29.06934810710988 35.0 20.0 39.0 7.0 40.0 44 29.216046783625732 35.0 20.0 39.0 7.0 40.0 45 29.347353647276083 35.0 20.0 39.0 7.0 40.0 46 29.062980609418283 35.0 20.0 39.0 7.0 40.0 47 28.865324715297014 35.0 20.0 39.0 7.0 40.0 48 28.75977593105571 34.0 20.0 38.0 7.0 40.0 49 28.995636811326563 35.0 20.0 39.0 7.0 40.0 50 28.842755309325945 34.0 20.0 39.0 7.0 40.0 51 27.76314188981225 33.0 19.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 18.0 10 27.0 11 36.0 12 42.0 13 53.0 14 72.0 15 141.0 16 190.0 17 432.0 18 902.0 19 1596.0 20 2562.0 21 3834.0 22 5288.0 23 7453.0 24 10642.0 25 15404.0 26 20293.0 27 22067.0 28 20673.0 29 19261.0 30 19326.0 31 21187.0 32 24068.0 33 28292.0 34 31874.0 35 36060.0 36 38768.0 37 40189.0 38 30605.0 39 4762.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.074730686365037 2.4022160664819943 28.90366266543552 38.61939058171745 2 37.514804555247764 20.122376115727917 30.207448445675595 12.155370883348722 3 11.092151431209603 20.27774699907664 56.28513388734996 12.344967682363803 4 10.398030163127116 2.5442905509387503 72.81354262850108 14.244136657433057 5 24.182948599569098 3.197783933518006 56.48654970760234 16.13271775931056 6 12.16448137888581 17.980424746075716 59.99926131117267 9.855832563865805 7 48.68525700215451 1.1176361957525394 47.54349030470914 2.6536164973838106 8 47.15370883348723 14.199322868574946 35.21108033240997 3.4358879655278547 9 44.23859649122807 3.0170514004309017 34.13850415512466 18.605847953216376 10 27.07910126192675 19.598153277931672 40.42351492767005 12.899230532471528 11 24.749276700523236 14.929147429978453 47.362757771622036 12.958818097876271 12 18.794952293013235 13.243213296398892 48.5513080947984 19.410526315789472 13 17.275961834410587 14.472883964296706 56.99649122807018 11.25466297322253 14 14.943428747306864 21.715235457063713 46.4563865804863 16.884949215143124 15 10.5689135118498 15.188180978762697 58.86044936903663 15.382456140350879 16 12.331917513080947 16.573961218836565 47.65478608802709 23.4393351800554 17 13.129947676208065 17.27546937519237 53.580547860880266 16.014035087719297 18 12.48654970760234 16.446168051708216 51.53265620190828 19.534626038781163 19 13.04327485380117 19.21132656201908 47.91997537703909 19.82542320714066 20 16.182948599569098 17.425423207140657 54.07793167128347 12.313696522006772 21 16.081009541397354 23.763127116035704 46.98504155124654 13.170821791320405 22 13.613296398891967 14.656325023084026 51.23644198214835 20.493936595875653 23 14.523361034164358 23.30637119113573 48.617297630040014 13.552970144659895 24 16.082240689442905 17.061495844875346 46.72403816558941 20.132225300092337 25 12.548845798707294 26.98528778085565 45.05435518621114 15.411511234225916 26 13.780978762696213 16.28267159125885 50.79495229301324 19.141397353031703 27 16.50698676515851 20.340781779008925 44.86081871345029 18.29141274238227 28 11.625238534933825 19.46346568174823 52.19673745767929 16.71455832563866 29 20.220621729763007 15.957402277623883 45.752908587257615 18.069067405355494 30 13.226962142197598 25.529332102185286 47.182271468144044 14.061434287473068 31 17.211203447214526 16.344721452754694 43.20492459218221 23.239150507848567 32 18.935549399815326 22.758756540473993 41.804616805170824 16.501077254539858 33 15.640012311480456 21.094736842105263 40.05564789165897 23.209602954755308 34 22.202277623884275 19.45410895660203 42.51178824253616 15.831825176977532 35 15.128100954139736 24.78473376423515 40.807879347491536 19.27928593413358 36 22.06734379809172 21.23681132656202 35.97980917205294 20.71603570329332 37 15.33985841797476 25.31905201600492 40.05564789165897 19.28544167436134 38 17.746752847029857 25.59507540781779 34.54847645429363 22.109695290858724 39 19.3243459526008 21.979193598030164 38.91388119421361 19.782579255155433 40 16.469806094182825 25.201108033241 41.25601723607264 17.07306863650354 41 20.46734379809172 24.10907971683595 37.69652200677132 17.727054478301017 42 16.03939673745768 22.289935364727608 43.67473068636504 17.99593721144968 43 23.063835026161897 21.85952600800246 33.80215450907972 21.274484456755925 44 19.535857186826718 23.800307787011388 36.88938134810711 19.774453678054783 45 16.571006463527237 21.274730686365036 37.229916897506925 24.924345952600802 46 22.59353647276085 24.91991381963681 33.65490920283164 18.8316405047707 47 15.243582640812559 22.209664512157588 44.25189289012004 18.294859956909818 48 19.54866112650046 23.740720221606647 34.791751308094796 21.918867343798095 49 16.143059402893197 20.2440135426285 42.590089258233306 21.022837796244996 50 20.111049553708835 19.804001231148046 37.715727916281935 22.369221298861188 51 18.468451831332718 20.19033548784241 36.13518005540166 25.20603262542321 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 52.0 1 678.0 2 1304.0 3 14733.0 4 28162.0 5 21296.0 6 14430.0 7 13601.0 8 12772.0 9 12380.5 10 11989.0 11 11279.0 12 10569.0 13 9805.5 14 9042.0 15 8376.5 16 7711.0 17 6954.5 18 6198.0 19 5821.5 20 5445.0 21 5045.5 22 4646.0 23 4505.0 24 4364.0 25 4181.5 26 4258.0 27 4517.0 28 4959.0 29 5401.0 30 5648.5 31 5896.0 32 6535.5 33 7175.0 34 7568.0 35 7961.0 36 8746.0 37 9531.0 38 10044.0 39 10557.0 40 10956.5 41 11356.0 42 12092.5 43 12829.0 44 14592.0 45 16355.0 46 42733.0 47 69111.0 48 47436.5 49 25762.0 50 23139.5 51 20517.0 52 17469.5 53 14422.0 54 13621.5 55 12821.0 56 12269.5 57 11718.0 58 10875.5 59 10033.0 60 9488.0 61 8943.0 62 7834.0 63 6725.0 64 5682.0 65 4639.0 66 3934.5 67 3230.0 68 2571.5 69 1913.0 70 1692.0 71 1471.0 72 1224.0 73 977.0 74 836.0 75 559.5 76 424.0 77 345.0 78 266.0 79 181.0 80 96.0 81 76.5 82 57.0 83 45.5 84 34.0 85 20.5 86 7.0 87 4.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 406125.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.80929557116283 #Duplication Level Percentage of deduplicated Percentage of total 1 84.63798223464282 35.3865441579501 2 5.115472111601742 4.2774857099999535 3 1.9595740568765032 2.4578523281259708 4 1.169290102467714 1.955487820100317 5 0.924263564592246 1.9321404278846883 6 0.7743872473340319 1.9425951186196628 7 0.656888970280742 1.9224845581133034 8 0.5731343560426219 1.9169874955019242 9 0.56237261137156 2.1161162456964213 >10 3.497761213049439 23.682727967319227 >50 0.08195643954010587 2.270952465863543 >100 0.03860267079787595 2.9003931504211726 >500 0.002375548972176982 0.6781074988271744 >1k 0.003563323458265473 3.7664638043608227 >5k 0.0 0.0 >10k+ 0.002375548972176982 12.79366125121573 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 14908 3.6707910126192678 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13133 3.233733456448138 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 12634 3.1108648815020006 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 10850 2.671591258848877 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACCATTGT 3061 0.7537088334872268 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTC 2600 0.6401969836872884 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACCATTGTCGTA 2432 0.5988304093567252 No Hit GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 2411 0.5936595875654048 TruSeq Adapter, Index 27 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCT 2348 0.5781471221914436 No Hit GAACTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 2317 0.5705140043090182 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGACCATTGTCGT 915 0.2253000923361034 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTT 644 0.15857186826715913 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTAT 602 0.14823022468451832 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATG 570 0.14035087719298245 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 438 0.10784856879039705 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08322560787934749 0.0 2 0.0 0.0 0.0 0.7916281932902431 0.0 3 0.0 0.0 0.0 0.8854416743613419 0.0 4 0.0 0.0 0.0 1.5857186826715912 0.0 5 0.0 0.0 0.0 4.7807940904893815 0.0 6 0.0 0.0 0.0 5.01865189289012 0.0 7 0.0 0.0 0.0 5.738627269929209 0.0 8 0.0 0.0 0.0 6.539612188365651 0.0 9 0.0 0.0 0.0 6.645490920283164 0.0 10 0.0 0.0 0.0 11.02123730378578 0.0 11 0.0 0.0 0.0 11.216497383810403 0.0 12 0.0 0.0 0.0 15.07146814404432 0.0 13 0.0 0.0 0.0 15.34453678054786 0.0 14 0.0 0.0 0.0 15.559002770083103 0.0 15 0.0 0.0 0.0 16.348414896891352 0.0 16 0.0 0.0 0.0 16.69978454909203 0.0 17 0.0 0.0 0.0 16.86549707602339 0.0 18 0.0 0.0 0.0 16.982456140350877 0.0 19 2.4622960911049554E-4 0.0 0.0 18.015389350569407 0.0 20 2.4622960911049554E-4 0.0 0.0 18.229362880886427 0.0 21 2.4622960911049554E-4 0.0 0.0 18.361588180978764 0.0 22 2.4622960911049554E-4 0.0 0.0 18.642536164973837 0.0 23 2.4622960911049554E-4 0.0 0.0 18.772545398584178 0.0 24 2.4622960911049554E-4 0.0 0.0 18.87817790089258 0.0 25 2.4622960911049554E-4 0.0 0.0 18.964358264081255 0.0 26 2.4622960911049554E-4 0.0 0.0 19.08624192059095 0.0 27 2.4622960911049554E-4 0.0 0.0 19.253185595567867 0.0 28 2.4622960911049554E-4 0.0 0.0 19.33985841797476 0.0 29 2.4622960911049554E-4 0.0 0.0 19.450661742074484 0.0 30 2.4622960911049554E-4 0.0 0.0 19.567374576792858 0.0 31 2.4622960911049554E-4 0.0 0.0 19.68064019698369 0.0 32 2.4622960911049554E-4 0.0 0.0 19.804493690366268 0.0 33 2.4622960911049554E-4 0.0 0.0 19.938935056940597 0.0 34 2.4622960911049554E-4 0.0 0.0 20.136903662665436 0.0 35 2.4622960911049554E-4 0.0 0.0 20.270852570021546 0.0 36 2.4622960911049554E-4 0.0 0.0 20.390027700831023 0.0 37 2.4622960911049554E-4 0.0 0.0 20.540227762388426 0.0 38 2.4622960911049554E-4 0.0 0.0 20.68082486919052 0.0 39 2.4622960911049554E-4 0.0 0.0 20.86451215758695 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGC 20 7.027892E-4 45.000004 5 GCGAACC 30 2.1620217E-6 45.000004 33 TCGGGCT 35 1.2093369E-7 45.000004 5 CGCGCGA 20 7.027892E-4 45.000004 41 TTATACG 20 7.027892E-4 45.000004 26 ATATCAC 30 2.1620217E-6 45.000004 30 CGAGGGA 20 7.027892E-4 45.000004 4 ACTACCG 20 7.027892E-4 45.000004 14 CTACCGA 20 7.027892E-4 45.000004 15 CTTCTCG 35 1.2093369E-7 45.000004 1 ACATCGA 20 7.027892E-4 45.000004 21 CACGTCT 20 7.027892E-4 45.000004 40 CACCGAA 20 7.027892E-4 45.000004 16 GCGACTA 25 3.886335E-5 45.0 11 CGTTTTT 11015 0.0 44.26464 1 GCGACTG 335 0.0 43.656715 11 GGCGACT 365 0.0 43.150684 10 CGATGAA 445 0.0 42.977528 19 TTGATAC 110 0.0 42.954544 3 ACGGCTG 1485 0.0 42.878784 8 >>END_MODULE