##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933446.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 309176 Sequences flagged as poor quality 0 Sequence length 51 %GC 33 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.18197402126944 31.0 28.0 31.0 25.0 34.0 2 28.137378062980307 31.0 25.0 33.0 16.0 34.0 3 28.06867285947163 31.0 25.0 33.0 16.0 34.0 4 32.980092245193674 35.0 32.0 37.0 28.0 37.0 5 34.264367221259086 35.0 33.0 37.0 32.0 37.0 6 33.377629570212434 35.0 32.0 37.0 28.0 37.0 7 33.924534892747175 35.0 33.0 37.0 30.0 37.0 8 33.33092478070743 35.0 32.0 37.0 28.0 37.0 9 34.98339133697311 37.0 34.0 39.0 29.0 39.0 10 35.08259049861567 37.0 34.0 39.0 28.0 39.0 11 35.42460928403239 37.0 34.0 39.0 30.0 39.0 12 35.428519678112146 37.0 34.0 39.0 30.0 39.0 13 35.489581985665126 37.0 34.0 39.0 30.0 39.0 14 36.27081985665123 38.0 35.0 40.0 30.0 41.0 15 36.4824760007245 38.0 34.0 41.0 30.0 41.0 16 36.5820632908117 38.0 34.0 41.0 31.0 41.0 17 35.6691528449815 38.0 33.0 40.0 27.0 41.0 18 35.41101508525888 38.0 34.0 39.0 27.0 40.0 19 34.67132312986778 37.0 33.0 37.0 27.0 40.0 20 33.4254599322069 35.0 32.0 37.0 26.0 39.0 21 33.98923913887236 35.0 33.0 37.0 27.0 39.0 22 34.405891789789635 35.0 33.0 38.0 28.0 40.0 23 34.603555903433644 35.0 33.0 38.0 29.0 40.0 24 34.17054363857479 35.0 33.0 38.0 27.0 40.0 25 33.30595518410226 35.0 33.0 38.0 24.0 40.0 26 33.16810813258468 35.0 32.0 38.0 24.0 40.0 27 33.88942220612208 35.0 33.0 38.0 25.0 40.0 28 33.55878528734443 35.0 33.0 38.0 24.0 40.0 29 33.3703909747199 35.0 33.0 38.0 23.0 40.0 30 32.62896214453903 35.0 31.0 38.0 21.0 40.0 31 32.630181514735945 35.0 32.0 38.0 20.0 40.0 32 31.79950901751753 35.0 31.0 38.0 15.0 40.0 33 30.71634602944601 35.0 27.0 38.0 10.0 40.0 34 30.029921468678033 35.0 23.0 38.0 8.0 40.0 35 29.25033314358165 35.0 21.0 38.0 7.0 40.0 36 28.699430098067122 35.0 18.0 38.0 7.0 40.0 37 28.286005382047765 35.0 17.0 38.0 7.0 40.0 38 27.928011876730405 34.0 16.0 38.0 7.0 40.0 39 27.705947421533367 34.0 15.0 38.0 7.0 40.0 40 27.293366884881102 33.0 15.0 38.0 7.0 40.0 41 27.038211245374804 33.0 15.0 38.0 7.0 40.0 42 27.13267200558905 33.0 15.0 38.0 7.0 40.0 43 27.002393458741945 33.0 13.0 38.0 7.0 40.0 44 27.054606437757133 34.0 12.0 38.0 7.0 40.0 45 27.08502600460579 34.0 10.0 38.0 7.0 40.0 46 26.831177064196446 33.0 10.0 38.0 7.0 40.0 47 26.550003881284447 33.0 10.0 38.0 7.0 40.0 48 26.53313323155743 33.0 10.0 38.0 7.0 40.0 49 26.727397986907135 33.0 10.0 38.0 7.0 40.0 50 26.66079514580692 33.0 10.0 38.0 7.0 40.0 51 25.521224157114393 31.0 10.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 13.0 10 16.0 11 23.0 12 23.0 13 36.0 14 64.0 15 84.0 16 173.0 17 392.0 18 799.0 19 1450.0 20 2353.0 21 3498.0 22 5039.0 23 7197.0 24 10610.0 25 15125.0 26 19806.0 27 20804.0 28 18355.0 29 16025.0 30 15464.0 31 16325.0 32 17799.0 33 20396.0 34 22731.0 35 25336.0 36 25600.0 37 23831.0 38 17322.0 39 2485.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.053108908841565 2.238207364090356 22.322560612725436 45.38612311434264 2 43.372383367402385 21.65012808238673 24.866742567340285 10.110745982870597 3 9.029484824177816 21.813788909876575 59.05115532900355 10.105570936942065 4 8.55499780060548 2.1017155277253083 78.15807177788703 11.185214893782183 5 23.8058581519911 2.5610008538825784 60.45423965637695 13.178901337749371 6 10.26826144332031 18.778301032421663 62.79821202163169 8.155225502626335 7 39.12399410044764 1.0233653323673249 57.4485082930111 2.4041322741739335 8 37.02163169198126 15.109516909462572 44.01732346624576 3.8515279323103995 9 34.76401790565891 2.4555592930887262 42.91859652754418 19.86182627370818 10 25.38360027945248 14.350725800191476 48.43196108365462 11.833712836701425 11 21.778210469117916 12.050741325329263 54.36612156182886 11.804926643723963 12 16.19530623334282 11.005382047765675 55.17601624964421 17.623295469247292 13 14.755026263358086 13.347413770797214 63.05308303361193 8.844476932232775 14 12.205669262814707 20.562721556653816 52.03023520583745 15.201373974694024 15 7.678150956089736 12.792066654591562 66.15196522369135 13.377817165627345 16 9.086086889021141 15.139596863922167 53.25607421015861 22.51824203689808 17 9.762077263435714 16.516159080911844 59.3839754702823 14.337788185370146 18 9.548606618883742 14.542202499547182 58.22379486117939 17.685396020389682 19 10.565503143840402 17.386537118016925 53.78004761042254 18.267912127720134 20 13.100305327709783 15.619582373793566 61.0270525525914 10.253059745905245 21 12.857725049809817 22.77602401221311 53.918156648640256 10.448094289336819 22 11.006675809247806 12.75778197531503 57.39158278779725 18.84395942763992 23 11.551025952855332 21.729370973167388 54.55759826118457 12.162004812792713 24 13.351295055243614 14.558374518073848 53.401622376898594 18.68870804978394 25 9.516586022200947 25.12872926747225 51.47068336481486 13.884001345511942 26 11.539382099516134 13.57899707609905 57.69788081869227 17.18374000569255 27 14.198708826040832 17.36389629207959 52.4067197971382 16.03067508474138 28 10.195810800320853 16.649739953942092 58.459582891298155 14.694866354438895 29 18.958457318808705 12.451160504049472 53.45854788211245 15.131834295029368 30 11.441379667244547 20.869343027919374 56.81100732268999 10.87826998214609 31 19.42130048904184 14.508888141382254 47.43835226537635 18.63145910419955 32 20.633554997800605 21.54565684270448 46.69832069759619 11.122467461898724 33 13.47387895567573 20.091468936786814 44.79713819960152 21.637513907935933 34 21.6177840453334 19.269283514891196 42.528850881051575 16.584081558723835 35 12.951199316893938 24.2809920563045 45.44434238103863 17.32346624576293 36 22.534737495795277 23.182588557973453 38.36196858747121 15.92070535876006 37 18.163764328408412 21.132946929904005 46.56085854011954 14.142430201568038 38 19.014089062540428 27.620837322431235 36.99607990270914 16.368993712319195 39 20.979312753900693 21.885269231764433 38.189251429606436 18.946166584728438 40 15.160620488006831 28.74608637151655 40.779038476466475 15.314254664010143 41 15.872189303180065 28.00443760188372 36.281600124201105 19.841772970735118 42 15.96501668952312 25.088622661526124 42.20605739125935 16.740303257691412 43 19.256345900069864 24.86124408104122 35.56809066680467 20.31431935208425 44 18.528928506740495 22.075775610008538 39.01014309001992 20.38515279323104 45 16.44209123605972 21.886886433617097 38.00747794136673 23.66354438895645 46 23.329107045825033 24.96539188035294 34.57254120630321 17.132959867518824 47 13.983944420006727 21.4001086759645 46.18631459104199 18.429632312986776 48 19.031554842549227 22.634033689548993 34.949672678345024 23.384738789556756 49 15.539045721530778 20.140308432737342 43.17314409915388 21.147501746578 50 17.814772168602996 20.019665174528424 39.88698993453567 22.27857272233291 51 18.13982974098895 18.757600848707533 37.87939555463555 25.22317385566797 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 23.0 1 461.5 2 900.0 3 12549.5 4 24199.0 5 18597.0 6 12995.0 7 12946.5 8 12898.0 9 12761.0 10 12624.0 11 11974.5 12 11325.0 13 10511.5 14 9698.0 15 8846.0 16 7994.0 17 7211.0 18 6428.0 19 5894.5 20 5361.0 21 4985.5 22 4610.0 23 4397.5 24 4185.0 25 3989.0 26 3727.0 27 3661.0 28 3646.0 29 3631.0 30 3772.0 31 3913.0 32 4079.5 33 4246.0 34 4894.5 35 5543.0 36 5519.5 37 5496.0 38 5876.5 39 6257.0 40 6903.0 41 7549.0 42 8234.0 43 8919.0 44 9923.5 45 10928.0 46 32641.0 47 54354.0 48 36766.5 49 19179.0 50 17251.5 51 15324.0 52 12330.0 53 9336.0 54 8509.5 55 7683.0 56 7151.5 57 6620.0 58 6014.0 59 5408.0 60 4860.5 61 4313.0 62 3742.0 63 3171.0 64 2822.5 65 2474.0 66 1957.5 67 1441.0 68 1244.0 69 1047.0 70 828.5 71 610.0 72 520.5 73 431.0 74 338.0 75 192.0 76 139.0 77 123.0 78 107.0 79 91.0 80 75.0 81 49.0 82 23.0 83 18.0 84 13.0 85 8.5 86 4.0 87 3.5 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 309176.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.40395554972653 #Duplication Level Percentage of deduplicated Percentage of total 1 87.2248288237065 39.60352250744075 2 4.889676925503047 4.4402134755612765 3 1.6749708507743144 2.281509061669338 4 1.0093115209355754 1.8330694172954298 5 0.7352292416039684 1.6691157902322868 6 0.5803926479904371 1.5811273194447528 7 0.4798487968517332 1.5250923409992097 8 0.42110946182272346 1.5296028228934557 9 0.37961336884842717 1.5512353672748336 >10 2.4777701885863674 19.02770606597798 >50 0.07649187950182106 2.3308277021526815 >100 0.04146288795425814 3.5781986615417294 >500 0.002144632135565076 0.6624731012524193 >1k 0.004289264271130152 4.467230422605118 >5k 0.0014297547570433842 6.039183989173206 >10k+ 0.0014297547570433842 7.8798919544855375 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 12667 4.097019173545165 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11610 3.7551427018914794 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC 9517 3.0781820063653065 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC 9089 2.939749527777059 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGACAAT 2993 0.9680570290061326 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTC 2366 0.7652599166817605 No Hit GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 2158 0.6979843196108365 No Hit GAACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT 2144 0.6934561544233705 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT 2093 0.6769606955261729 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTA 2009 0.6497917044013766 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGGACAATCGT 874 0.28268688384609414 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTAT 585 0.18921261676197376 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTT 582 0.1882422956503739 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATG 440 0.14231376303464693 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 390 0.12614174450798252 No Hit CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 378 0.12226046006158305 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTGGACAA 371 0.11999637746785002 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 332 0.10738220301705177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 332 0.10738220301705177 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCGTGGACAAT 314 0.10156027634745257 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.234403705332885E-4 0.0 0.0 0.13131679043651512 0.0 2 3.234403705332885E-4 0.0 0.0 0.9968432219835951 0.0 3 3.234403705332885E-4 0.0 0.0 1.1197505627862447 0.0 4 3.234403705332885E-4 0.0 0.0 1.9930395632261235 0.0 5 3.234403705332885E-4 0.0 0.0 5.495898776101638 0.0 6 3.234403705332885E-4 0.0 0.0 5.803490568478796 0.0 7 3.234403705332885E-4 0.0 0.0 6.648316816311745 0.0 8 3.234403705332885E-4 0.0 0.0 7.6264004968044095 0.0 9 3.234403705332885E-4 0.0 0.0 7.783269076513054 0.0 10 3.234403705332885E-4 0.0 0.0 12.795624498667426 0.0 11 3.234403705332885E-4 0.0 0.0 13.100305327709783 0.0 12 3.234403705332885E-4 0.0 0.0 16.977385049292312 0.0 13 3.234403705332885E-4 0.0 0.0 17.28594716278107 0.0 14 3.234403705332885E-4 0.0 0.0 17.55763707402903 0.0 15 3.234403705332885E-4 0.0 0.0 18.400846120009316 0.0 16 3.234403705332885E-4 0.0 0.0 18.84266566615779 0.0 17 3.234403705332885E-4 0.0 0.0 19.10432892591922 0.0 18 3.234403705332885E-4 0.0 0.0 19.277369524154526 0.0 19 3.234403705332885E-4 0.0 0.0 20.61414857556861 0.0 20 3.234403705332885E-4 0.0 0.0 20.888426009780837 0.0 21 3.234403705332885E-4 0.0 0.0 21.05984940616348 0.0 22 3.234403705332885E-4 0.0 0.0 21.407871244857297 0.0 23 3.234403705332885E-4 0.0 0.0 21.57411959531141 0.0 24 3.234403705332885E-4 0.0 0.0 21.726783450203122 0.0 25 3.234403705332885E-4 0.0 0.0 21.84645638730044 0.0 26 3.234403705332885E-4 0.0 0.0 22.00106088441535 0.0 27 3.234403705332885E-4 0.0 0.0 22.196418868217457 0.0 28 3.234403705332885E-4 0.0 0.0 22.296685383082774 0.0 29 3.234403705332885E-4 0.0 0.0 22.420563044997024 0.0 30 3.234403705332885E-4 0.0 0.0 22.55964240432634 0.0 31 3.234403705332885E-4 0.0 0.0 22.69031231402179 0.0 32 3.234403705332885E-4 0.0 0.0 22.830361994462702 0.0 33 3.234403705332885E-4 0.0 0.0 22.962972546381348 0.0 34 3.234403705332885E-4 0.0 0.0 23.152508603513855 0.0 35 3.234403705332885E-4 0.0 0.0 23.310670944704633 0.0 36 3.234403705332885E-4 0.0 0.0 23.449750304033948 0.0 37 3.234403705332885E-4 0.0 0.0 23.61599865448806 0.0 38 3.234403705332885E-4 0.0 0.0 23.77125003234404 0.0 39 3.234403705332885E-4 0.0 0.0 23.94558439206148 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGGTG 20 7.0252776E-4 45.0 5 ACCGGTG 40 6.7866495E-9 45.0 17 AGTCCAT 20 7.0252776E-4 45.0 39 GGTGTCG 25 3.884168E-5 45.0 29 TACTTGG 20 7.0252776E-4 45.0 2 CGTGCGG 20 7.0252776E-4 45.0 2 GGACTAC 20 7.0252776E-4 45.0 8 GTTAGTT 20 7.0252776E-4 45.0 35 GGTCACT 20 7.0252776E-4 45.0 36 TACGGGA 25 3.884168E-5 45.0 4 CGCGACC 20 7.0252776E-4 45.0 10 CTACGGG 20 7.0252776E-4 45.0 3 CGGGCGA 50 2.1827873E-11 45.0 6 GCTAGTC 20 7.0252776E-4 45.0 30 AGTTAGT 20 7.0252776E-4 45.0 34 TGTAATA 25 3.884168E-5 45.0 43 CTAGGGA 40 6.7866495E-9 45.0 4 GCCCGCG 25 3.884168E-5 45.0 1 AGTAATC 20 7.0252776E-4 45.0 16 GACCCGT 55 1.8189894E-12 44.999996 38 >>END_MODULE