SRR2933444.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933444.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	661878
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26044	3.9348641290388864	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC	19195	2.9000812838619807	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG	18514	2.7971922318010267	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTC	17489	2.642329855350986	No Hit
GAACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCT	4797	0.7247559217861902	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTTTCGT	4382	0.6620555449795884	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTA	3749	0.566418584693856	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTC	3660	0.5529719978606329	No Hit
GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	3343	0.5050779750951082	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCT	3163	0.47788263093802785	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGT	1614	0.2438515859418201	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTT	1123	0.1696687304911177	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTAT	994	0.15017873384521016	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATG	891	0.13461695357754752	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	744	0.11240742251593194	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	697	0.10530641598602763	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATCCGA	25	3.889005E-5	45.000004	25
CGACGAA	20	7.0311147E-4	45.000004	19
CGGTTAT	25	3.889005E-5	45.000004	31
CGACCGT	20	7.0311147E-4	45.000004	12
GTCGTTG	30	2.1641008E-6	45.000004	1
GCGATTA	30	2.1641008E-6	45.000004	9
AGGGCCG	30	2.1641008E-6	45.000004	6
GCCGTTG	30	2.1641008E-6	45.000004	1
AGGTCGA	20	7.0311147E-4	45.000004	11
CGTTTTT	22710	0.0	44.464993	1
CGGCTGT	2440	0.0	43.063526	9
ACGGCTG	2435	0.0	42.874744	8
GATACCT	2455	0.0	42.70876	5
TACGGCT	2435	0.0	42.68994	7
TGATACC	2485	0.0	42.19316	4
CGCTTTT	605	0.0	42.02479	1
CTTTGCG	70	0.0	41.785713	1
CACCCGT	140	0.0	41.785713	16
CGATGAA	555	0.0	41.756756	19
GAATCTG	2100	0.0	41.464287	1