##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933437.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 236619 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.12014250757547 31.0 25.0 31.0 16.0 33.0 2 28.148897594867698 31.0 28.0 33.0 16.0 34.0 3 28.393252443802062 31.0 28.0 33.0 16.0 34.0 4 31.590848579361758 35.0 28.0 35.0 19.0 37.0 5 33.53368495344837 35.0 33.0 37.0 28.0 37.0 6 32.08916443734442 35.0 32.0 37.0 17.0 37.0 7 31.95426825402863 35.0 31.0 35.0 25.0 37.0 8 32.42759879806778 35.0 32.0 35.0 25.0 37.0 9 32.8054213736006 34.0 31.0 37.0 25.0 39.0 10 31.55022631318702 35.0 28.0 39.0 15.0 39.0 11 32.173215168688905 35.0 27.0 39.0 17.0 39.0 12 33.05556189486052 35.0 31.0 39.0 23.0 39.0 13 33.16862973810218 35.0 31.0 39.0 23.0 39.0 14 33.38621581529801 36.0 31.0 39.0 19.0 41.0 15 33.869507520528785 36.0 32.0 39.0 24.0 41.0 16 34.11373135716067 36.0 32.0 40.0 25.0 41.0 17 31.95726040596909 34.0 27.0 39.0 18.0 41.0 18 32.748194354637626 35.0 30.0 39.0 21.0 39.0 19 32.565220882515774 36.0 30.0 37.0 19.0 39.0 20 32.210418436389304 34.0 30.0 36.0 23.0 39.0 21 32.74656726636491 35.0 31.0 37.0 24.0 39.0 22 33.08889818653616 35.0 31.0 38.0 25.0 39.0 23 33.96138940659879 35.0 32.0 38.0 27.0 40.0 24 32.40486182428292 35.0 31.0 37.0 22.0 39.0 25 31.616505859630884 35.0 30.0 37.0 18.0 39.0 26 30.914398252042314 33.0 26.0 37.0 20.0 39.0 27 32.582108790925496 35.0 31.0 38.0 22.0 39.0 28 32.38033294029643 35.0 31.0 38.0 21.0 39.0 29 32.70653244244968 35.0 31.0 38.0 22.0 40.0 30 31.695658421344017 35.0 30.0 38.0 18.0 40.0 31 32.017936006829544 35.0 30.0 37.0 21.0 40.0 32 31.836547360947346 35.0 30.0 37.0 18.0 40.0 33 31.869106031214738 35.0 30.0 38.0 16.0 40.0 34 31.18830694069369 35.0 30.0 38.0 12.0 40.0 35 30.67633621983019 35.0 28.0 38.0 10.0 40.0 36 30.149941467084215 35.0 26.0 38.0 8.0 40.0 37 30.31514798050875 35.0 27.0 38.0 8.0 40.0 38 30.161571978581602 35.0 25.0 38.0 8.0 40.0 39 29.778077838212486 35.0 25.0 38.0 8.0 40.0 40 29.493506438620738 34.0 23.0 38.0 8.0 40.0 41 29.163207519260922 34.0 23.0 38.0 8.0 40.0 42 29.459071334085596 34.0 23.0 38.0 8.0 40.0 43 29.50682320523711 35.0 23.0 38.0 7.0 40.0 44 29.40354324885153 35.0 23.0 38.0 7.0 40.0 45 29.80132618259734 35.0 23.0 38.0 7.0 40.0 46 29.39720817009623 35.0 23.0 38.0 7.0 40.0 47 29.39226351222852 35.0 23.0 38.0 7.0 40.0 48 29.155600353310597 34.0 23.0 38.0 7.0 40.0 49 29.076794340268535 34.0 23.0 37.0 7.0 40.0 50 29.247702001952504 34.0 23.0 38.0 7.0 40.0 51 27.37642370223862 32.0 20.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 13.0 11 16.0 12 17.0 13 30.0 14 68.0 15 110.0 16 229.0 17 489.0 18 860.0 19 1286.0 20 1970.0 21 2683.0 22 3720.0 23 4917.0 24 6707.0 25 8986.0 26 11797.0 27 13024.0 28 13074.0 29 13790.0 30 15258.0 31 17714.0 32 19995.0 33 22183.0 34 23974.0 35 24422.0 36 17974.0 37 9302.0 38 1961.0 39 40.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.961909229605403 2.42076925352571 32.90817728077627 37.70914423609263 2 37.24722021477565 15.723589398991628 33.78807280903055 13.24111757720217 3 12.95669409472612 15.41127297469772 58.437403589737094 13.19462934083907 4 11.563314864824887 2.812960920298032 70.17906423406404 15.444659980813036 5 21.591250068675805 3.375891200622097 57.99153914098192 17.04131958972018 6 13.479052823315119 14.084245136696547 60.58346962838994 11.853232411598393 7 51.64927584006356 1.1943250542010575 44.12283037287792 3.033568732857463 8 51.89016942849053 11.06081929177285 32.80928412342204 4.239727156314581 9 47.83554997696719 2.750413111373136 32.85154615647941 16.562490755180267 10 28.137216368930645 19.194992794323365 38.66680190517245 14.000988931573543 11 24.107531516911152 16.24975171055579 46.19916405698613 13.443552715546932 12 20.017411957619633 13.75586913984084 47.75905569713337 18.46766320540616 13 17.6034046293831 15.03429563982605 54.70186248779684 12.66043724299401 14 15.104873235031842 19.0838436473825 47.044827338463946 18.76645577912171 15 11.52865999771785 15.743875174859163 56.66831488595591 16.059149941467084 16 13.57033881471902 15.3795764499047 47.05285712474485 23.997227610631437 17 13.87589331372375 16.76915209683077 51.90791948237462 17.44703510707086 18 13.661624806122925 15.830934962957327 50.606248864207856 19.90119136671189 19 14.328942308098675 18.831116689699474 46.84281482044975 19.9971261817521 20 16.65800294988991 17.60213676839138 52.8199341557525 12.919926125966215 21 17.601714148060807 22.048102646025892 45.720757842776784 14.62942536313652 22 14.697889856689446 15.819101593701266 49.131726530836495 20.351282018772796 23 14.810729484952603 22.499883779409092 46.5503615516928 16.1390251839455 24 16.64405647898098 16.078590476673472 46.643338024419 20.63401501992655 25 13.550898279512635 23.116064221385436 44.87382670030725 18.459210798794686 26 13.576678119677627 16.76196755121102 50.32731944602927 19.334034883082087 27 15.095152967428652 19.602398792996336 45.66793030145509 19.63451793811993 28 11.93817909804369 18.778289148377773 51.693650974773796 17.589880778804744 29 17.020188573191504 16.01308432543456 48.794052886708165 18.172674214665772 30 13.963798342483063 23.493041556257104 46.77054674392166 15.77261335733817 31 17.435624358145375 17.017230230877487 44.059437323291874 21.487708087685267 32 19.487023442749738 21.73325049974854 44.32103930791695 14.458686749584777 33 17.059069643604275 20.24562693612939 40.5918375109353 22.103465909331035 34 20.48863362620922 19.361927824899944 43.97322277585485 16.176215773035977 35 17.293201306742063 23.832405681707726 39.60417379838474 19.27021921316547 36 18.819283320443414 20.638241223232285 39.3117205296278 21.230754926696505 37 16.651663644931304 24.66961655657407 43.02190441173363 15.656815386760995 38 18.0712453353281 25.360178176731367 35.87370414041138 20.69487234752915 39 21.640274027022343 21.630976379749725 40.25965793110443 16.469091662123496 40 20.87448598802294 24.013287183193235 38.109788309476414 17.002438519307407 41 23.550940541545692 21.977525050820095 35.92822216305537 18.54331224457884 42 19.343332530354708 21.268368136117555 40.82554655374251 18.562752779785225 43 21.20328460520922 20.69487234752915 36.931522827837156 21.170320219424475 44 20.174204100262447 22.423389499575265 37.42007192998027 19.98233447018202 45 17.377302752526212 20.520752771332816 37.719287124026394 24.38265735211458 46 21.22187989975446 24.434217032444565 36.31027094189393 18.033632125907047 47 15.316183400318655 22.110650454950786 44.08986598709318 18.483300157637384 48 20.65894961943039 22.117835000570537 35.48024461264734 21.742970767351736 49 17.956715225742652 19.337838466057246 41.44003651439656 21.265409793803542 50 19.954441528364164 19.096099636969136 38.68877816236228 22.260680672304424 51 18.76645577912171 19.973036822909403 36.56595624189097 24.694551156077914 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 66.0 1 259.5 2 453.0 3 10524.5 4 20596.0 5 14109.5 6 7623.0 7 7277.0 8 6931.0 9 6605.5 10 6280.0 11 5825.0 12 5370.0 13 4905.5 14 4441.0 15 4096.0 16 3751.0 17 3389.5 18 3028.0 19 2706.5 20 2385.0 21 2185.5 22 1986.0 23 1879.5 24 1773.0 25 1769.5 26 1816.0 27 1866.0 28 2195.5 29 2525.0 30 2559.0 31 2593.0 32 3084.5 33 3576.0 34 4095.5 35 4615.0 36 4782.0 37 4949.0 38 5342.5 39 5736.0 40 6782.0 41 7828.0 42 8238.0 43 8648.0 44 9874.0 45 11100.0 46 21113.5 47 31127.0 48 24799.5 49 18472.0 50 16818.5 51 15165.0 52 12786.5 53 10408.0 54 9232.5 55 8057.0 56 7714.0 57 7371.0 58 6972.0 59 6573.0 60 6278.0 61 5983.0 62 5215.0 63 4447.0 64 3853.0 65 3259.0 66 2600.0 67 1941.0 68 1656.5 69 1372.0 70 1207.0 71 1042.0 72 847.0 73 652.0 74 514.5 75 312.5 76 248.0 77 183.0 78 118.0 79 96.5 80 75.0 81 50.0 82 25.0 83 20.0 84 15.0 85 10.5 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 236619.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.324987616639696 #Duplication Level Percentage of deduplicated Percentage of total 1 80.07310280476536 34.691661874423765 2 6.917255759269018 5.993800402229196 3 2.9858608467778285 3.880871526349762 4 2.0275669484619856 3.5137725173609384 5 1.5066640839891405 3.2638101390632652 6 1.2387231708509403 3.2200599622536985 7 0.9597854793599779 2.9107885805531146 8 0.7858243599248385 2.723666453007795 9 0.6618520689846223 2.5807259423525513 >10 2.74138727061318 17.630195922299073 >50 0.053987933119293424 1.5177683286259491 >100 0.03699173195210846 2.9125211876943156 >500 0.004998882696230873 1.6425164104308214 >1k 0.003999106156984698 4.7308977412250615 >5k 9.997765392461746E-4 2.944141361207356 >10k+ 9.997765392461746E-4 5.842801650923352 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13489 5.700725639107595 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCG 6797 2.872550386908913 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGC 4960 2.096196839645168 No Hit GAATCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC 3272 1.382813721636893 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACTAGGGT 1399 0.591245842472498 No Hit GCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 1291 0.5456028467705467 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTC 912 0.3854297414831438 No Hit GAACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCT 899 0.37993567718568666 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTA 842 0.3558463183429902 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCT 589 0.2489233747078637 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTACTAGGGTCGTATGCCG 550 0.23244118181549242 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACTAGGGTCGT 328 0.1386194684281482 No Hit GAATCTTTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC 319 0.13481588545298562 No Hit CTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGCT 304 0.12847658049438127 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCTGCCTCCTATACACATCTGACGCTACTAGGGTCGTATGC 276 0.11664321123831982 No Hit GAATGACTCTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCT 261 0.1103039062797155 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTAT 247 0.10438722165168478 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTT 238 0.10058363867652217 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1610183459485502 0.0 2 0.0 0.0 0.0 1.0793723242850322 0.0 3 0.0 0.0 0.0 1.2737776763488984 0.0 4 0.0 0.0 0.0 1.9825119707208636 0.0 5 0.0 0.0 0.0 3.911351159458877 0.0 6 0.0 0.0 0.0 4.232119990364256 0.0 7 0.0 0.0 0.0 4.691085669367211 0.0 8 0.0 0.0 0.0 5.364742476301565 0.0 9 0.0 0.0 0.0 5.535481089853309 0.0 10 0.0 0.0 0.0 9.359349840883446 0.0 11 0.0 0.0 0.0 9.959893330628564 0.0 12 0.0 0.0 0.0 12.912741580346465 0.0 13 4.226203305736226E-4 0.0 0.0 13.200546025467101 0.0 14 4.226203305736226E-4 0.0 0.0 13.382695387944333 0.0 15 4.226203305736226E-4 0.0 0.0 13.985774599672892 0.0 16 4.226203305736226E-4 0.0 0.0 14.33781733504072 0.0 17 4.226203305736226E-4 0.0 0.0 14.640836112062006 0.0 18 4.226203305736226E-4 0.0 0.0 14.926104835199203 0.0 19 4.226203305736226E-4 0.0 0.0 15.940393628575896 0.0 20 4.226203305736226E-4 0.0 0.0 16.25355529353095 0.0 21 4.226203305736226E-4 0.0 0.0 16.572633643114035 0.0 22 4.226203305736226E-4 0.0 0.0 17.04681365401764 0.0 23 4.226203305736226E-4 0.0 0.0 17.3422252650886 0.0 24 4.226203305736226E-4 0.0 0.0 17.60213676839138 0.0 25 4.226203305736226E-4 0.0 0.0 17.82020885896737 0.0 26 4.226203305736226E-4 0.0 0.0 18.022643997312134 0.0 27 4.226203305736226E-4 0.0 0.0 18.222120793342885 0.0 28 4.226203305736226E-4 0.0 0.0 18.396240369539218 0.0 29 4.226203305736226E-4 0.0 0.0 18.586419518297348 0.0 30 4.226203305736226E-4 0.0 0.0 18.800688025898175 0.0 31 4.226203305736226E-4 0.0 0.0 19.007349367548674 0.0 32 4.226203305736226E-4 0.0 0.0 19.218236912504914 0.0 33 4.226203305736226E-4 0.0 0.0 19.433350660766887 0.0 34 4.226203305736226E-4 0.0 0.0 19.65860729696263 0.0 35 4.226203305736226E-4 0.0 0.0 19.868226980927144 0.0 36 4.226203305736226E-4 0.0 0.0 20.07319784125535 0.0 37 4.226203305736226E-4 0.0 0.0 20.281127043897573 0.0 38 4.226203305736226E-4 0.0 0.0 20.497931273481843 0.0 39 4.226203305736226E-4 0.0 0.0 20.71600336405783 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 25 3.881387E-5 45.0 6 ATGATCC 70 0.0 45.0 3 TCGGGAT 35 1.2064629E-7 45.0 5 CGACCCT 25 3.881387E-5 45.0 12 TACGGAT 25 3.881387E-5 45.0 29 CCCGTCT 35 1.2064629E-7 45.0 18 CGGATTT 20 7.0219213E-4 45.0 33 CGGGATG 50 2.1827873E-11 45.0 6 TAGGGCG 20 7.0219213E-4 45.0 5 TCGAGGG 20 7.0219213E-4 45.0 2 ATACGGA 25 3.881387E-5 45.0 28 CCTATGC 20 7.0219213E-4 45.0 35 AGGGCGA 25 3.881387E-5 45.0 6 CCTTGCG 20 7.0219213E-4 45.0 1 CCGTGTC 30 2.1581727E-6 44.999996 19 TTATACG 30 2.1581727E-6 44.999996 26 CTACGGC 60 0.0 44.999996 6 TAGGGAC 30 2.1581727E-6 44.999996 5 TTACGGG 30 2.1581727E-6 44.999996 3 TATACGG 30 2.1581727E-6 44.999996 27 >>END_MODULE