SRR2933435.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933435.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	409231
Sequences flagged as poor quality	0
Sequence length	51
%GC	33

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33022	8.069281163939193	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCG	7678	1.8762019495101787	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGC	5808	1.4192473199733158	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTC	4753	1.1614467134698985	No Hit
GAACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCT	1494	0.365074982100574	No Hit
GCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC	1382	0.33770657648125385	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGCTTCGT	1375	0.3359960511300464	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTC	998	0.2438720429292991	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTA	763	0.18644726328161845	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCTTGCTTCGTCGTATGCCG	632	0.1544360031375922	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCT	583	0.14246232567913966	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTT	552	0.134887141980935	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	547	0.1336653381586439	No Hit
GAATCTTTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTC	503	0.1229134645224824	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC	501	0.122424742993566	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCC	444	0.10849617941944771	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT	438	0.10703001483269842	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	420	0.10263152107245052	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTCA	30	2.1620617E-6	45.000004	16
CACCGGT	165	0.0	45.000004	16
TGATCCG	85	0.0	45.0	4
CGTTGAT	25	3.886388E-5	45.0	25
GGGTACA	50	2.1827873E-11	45.0	7
CGATTGC	20	7.0279563E-4	45.0	10
AGTTGAC	20	7.0279563E-4	45.0	32
CGCAACG	20	7.0279563E-4	45.0	16
TATACGG	50	2.1827873E-11	45.0	27
TATCGGG	25	3.886388E-5	45.0	3
TCGCGCG	20	7.0279563E-4	45.0	1
TAATCGT	25	3.886388E-5	45.0	21
CGTTTTT	14915	0.0	44.577602	1
CCGATGA	140	0.0	43.392857	18
CGATGAA	135	0.0	43.333332	19
TGATACC	1000	0.0	42.3	4
ACGGCTG	825	0.0	42.0	8
ACCCTTG	70	0.0	41.785713	39
GAATGAT	3240	0.0	41.52778	1
TACGGCT	835	0.0	41.497005	7