SRR2933434.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933434.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	833845
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26485	3.1762497826334632	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG	23587	2.8287031762497827	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC	20929	2.509938897516925	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC	20289	2.4331860237813983	No Hit
GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT	4902	0.5878790422680474	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT	4828	0.5790044912423772	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC	4573	0.5484232681133784	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA	4423	0.5304343133316144	No Hit
GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC	3888	0.46627370794332285	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT	3785	0.4539212923265115	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGT	1563	0.18744490882598086	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTT	1292	0.15494486385359388	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTAT	984	0.11800754336837181	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATG	964	0.11560901606413661	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGTTG	20	7.032171E-4	45.0	1
CGTTTTT	22440	0.0	44.31818	1
GATACCT	3085	0.0	42.447327	5
CCGATGA	760	0.0	42.33553	18
CGGCTGT	2495	0.0	42.29459	9
TGATACC	3115	0.0	42.182983	4
CGATGAA	780	0.0	42.115383	19
TACGGCT	2540	0.0	41.633858	7
GGCGACT	595	0.0	41.596638	10
ATACCTG	3170	0.0	41.451103	6
ACCGGTC	60	3.6379788E-12	41.249996	17
ACGGCTG	2565	0.0	41.22807	8
CCGGTGA	105	0.0	40.714287	18
GATACGC	50	1.0804797E-9	40.5	5
GATGAAT	830	0.0	40.391567	20
GAATCTG	2455	0.0	40.23422	1
ATGATAC	9515	0.0	40.128746	3
TACCTGT	3290	0.0	40.07599	7
TACGGGA	90	0.0	40.0	4
CACAACG	45	1.9272193E-8	40.0	12