##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933434.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 833845 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.3242233268773 31.0 28.0 31.0 25.0 34.0 2 28.483128159310183 31.0 27.0 33.0 16.0 34.0 3 28.48773453099797 31.0 26.0 33.0 16.0 34.0 4 33.02804957755938 35.0 32.0 37.0 28.0 37.0 5 34.19426392195192 35.0 33.0 37.0 30.0 37.0 6 33.49781074420306 35.0 33.0 37.0 28.0 37.0 7 33.562364708069246 35.0 32.0 37.0 29.0 37.0 8 33.41864255347217 35.0 33.0 37.0 28.0 37.0 9 34.66341466339667 37.0 34.0 39.0 28.0 39.0 10 34.677810624276695 37.0 33.0 39.0 27.0 39.0 11 34.85514454125167 37.0 34.0 39.0 27.0 39.0 12 35.002251017875025 37.0 34.0 39.0 27.0 39.0 13 35.05328568259089 37.0 34.0 39.0 27.0 39.0 14 35.83119404685523 38.0 34.0 40.0 27.0 41.0 15 36.10825872914031 38.0 34.0 40.0 27.0 41.0 16 36.080165978089454 38.0 34.0 40.0 29.0 41.0 17 35.33344086730747 37.0 33.0 40.0 27.0 41.0 18 35.144111915284014 37.0 33.0 39.0 27.0 40.0 19 34.405972332987545 37.0 33.0 38.0 27.0 40.0 20 33.72155736377864 35.0 32.0 38.0 27.0 40.0 21 34.15614292824206 35.0 33.0 38.0 27.0 40.0 22 34.67722778214176 35.0 33.0 39.0 28.0 40.0 23 34.98746049925346 35.0 33.0 39.0 29.0 40.0 24 34.49486535267346 35.0 33.0 39.0 27.0 40.0 25 33.5401975187235 35.0 33.0 38.0 24.0 40.0 26 33.52329389754691 35.0 32.0 38.0 24.0 40.0 27 34.224189147863214 35.0 33.0 38.0 26.0 40.0 28 33.90799009408224 35.0 33.0 39.0 24.0 40.0 29 33.906632527628034 35.0 33.0 39.0 24.0 40.0 30 33.23264875366525 35.0 32.0 39.0 21.0 40.0 31 33.192420653718614 35.0 33.0 39.0 21.0 40.0 32 32.544598816326776 35.0 31.0 39.0 18.0 40.0 33 31.792980709844155 35.0 30.0 39.0 13.0 40.0 34 31.366594510970263 35.0 30.0 39.0 10.0 40.0 35 30.95511276076489 35.0 27.0 39.0 8.0 41.0 36 30.358792101649588 35.0 24.0 39.0 7.0 40.0 37 30.321414651404037 35.0 23.0 39.0 7.0 40.0 38 29.83585918246197 35.0 23.0 39.0 7.0 40.0 39 29.596496950872165 35.0 22.0 39.0 7.0 40.0 40 29.373118505237784 35.0 21.0 39.0 7.0 40.0 41 28.862565584730977 34.0 20.0 39.0 7.0 40.0 42 29.199760147269576 35.0 21.0 39.0 7.0 40.0 43 29.11529001193267 35.0 20.0 39.0 7.0 40.0 44 29.27746403708123 35.0 20.0 39.0 7.0 40.0 45 29.318728300823295 35.0 20.0 39.0 7.0 40.0 46 29.133753875120675 35.0 20.0 39.0 7.0 40.0 47 29.074264401657384 35.0 20.0 39.0 7.0 40.0 48 28.928598240680223 35.0 20.0 38.0 7.0 40.0 49 29.133352121797216 35.0 20.0 39.0 7.0 40.0 50 29.11570855494726 35.0 20.0 39.0 7.0 40.0 51 28.181400620019307 33.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 19.0 9 46.0 10 61.0 11 66.0 12 77.0 13 105.0 14 159.0 15 253.0 16 452.0 17 919.0 18 1887.0 19 3253.0 20 5384.0 21 7849.0 22 10896.0 23 15611.0 24 22402.0 25 31746.0 26 41481.0 27 45367.0 28 42506.0 29 39663.0 30 40104.0 31 43450.0 32 48954.0 33 57110.0 34 64426.0 35 75142.0 36 80099.0 37 82045.0 38 62985.0 39 9327.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.313295636479204 2.459689750493197 29.494330481084614 39.73268413194299 2 38.33386300811302 17.58936013287841 30.74516247024327 13.331614388765297 3 12.387554041818323 17.806306927546487 56.70022606119842 13.105912969436767 4 10.817118289370327 2.896581498959639 70.56095557327801 15.725344638392027 5 22.153637666472786 3.536988289190437 57.491140439769985 16.818233604566796 6 13.327177113252464 15.757364977903569 60.299216281203336 10.616241627640628 7 50.463455438360846 1.2697803548621147 45.66867943082947 2.598084775947568 8 49.12004029525871 12.050321102842855 35.40646043329396 3.4231781686044767 9 45.965856963824216 3.1207238755404183 34.55162530206453 16.361793858570834 10 27.97522321294725 19.467886717555423 40.43833086484898 12.118559204648346 11 24.900431135282936 14.671431740911082 46.59834861395103 13.829788509854948 12 18.62696304469056 13.648819624750402 49.37620301135103 18.348014319208005 13 18.17711924878125 14.324364839988245 55.64715264827396 11.851363262956545 14 15.212659427111753 20.86946614778526 47.695674855638636 16.222199569464347 15 11.734794835970714 14.761136662089477 57.44352967278091 16.060538829158897 16 14.236938519748874 16.89138868734597 46.91303539626669 21.958637396638466 17 14.535914948221793 17.43309607900749 52.16605004527221 15.864938927498514 18 15.009624090808243 15.812171326805341 50.569830124303685 18.60837445808274 19 14.406154621062667 18.00622417835449 47.57826694409633 20.009354256486517 20 17.012034610748998 17.55626045607997 52.75045122294911 12.681253710221924 21 16.546600387362158 22.549514598036804 47.77470633031319 13.129178684287849 22 14.645407719660128 13.97022228351792 52.06759049943335 19.316779497388602 23 15.300925231907609 21.37519562988325 49.8144139498348 13.509465188374339 24 16.328934034502815 17.034340914678385 47.68907890555199 18.947646145266805 25 13.66429012586272 25.245459287997168 45.19724888918204 15.893001696958068 26 14.526680618100487 15.500362777254765 49.992504602174265 19.980452002470482 27 17.240734189207828 17.9624510550522 45.9483477145033 18.84846704123668 28 12.594906727269455 18.605616151682867 50.53589096294875 18.263586158098928 29 16.873879438025053 16.313943238851344 46.01658581630878 20.795591506814816 30 14.83153343846878 20.416504266380443 47.96478961917383 16.78717267597695 31 20.471310615282217 17.20355701599218 43.05356511102183 19.27156725770377 32 18.833116466489574 23.587956994405435 41.97878502599404 15.600141513110948 33 16.437107615923825 20.84296242107346 40.2192253956071 22.50070456739562 34 18.473457297219507 22.8665999076567 39.560829650594535 19.09911314452926 35 15.493646900802908 22.178342497706407 38.229527070378786 24.098483531111896 36 20.281467179152003 22.2425031030947 37.47878802415317 19.997241693600127 37 16.572744334978324 25.682830741924455 37.63960927990214 20.104815643195078 38 21.57463317523041 25.880229539063016 33.77786039371826 18.76727689198832 39 19.83030419322536 27.799890867007658 34.36214164502995 18.007663294737032 40 18.60513644622202 24.611288668757382 35.723665669279065 21.059909215741534 41 18.581630878640514 26.895166367850138 35.91722682273084 18.605975930778502 42 18.25087396338648 22.58609213942639 38.17819858606815 20.984835311118974 43 20.016309985668798 21.812447157445327 36.462771858079144 21.708470998806735 44 21.15165288512853 22.300787316587613 35.04560200037177 21.501957797912084 45 19.001972788707732 21.151892737858955 35.29456913455139 24.551565338881925 46 22.29718952563126 24.339775377917956 34.04889397909683 19.314141117353945 47 15.699800322601924 22.864920938543733 42.71885062571581 18.716428113138534 48 19.39077406472426 25.154555103166654 33.777500614622625 21.677170217486463 49 17.638529942615232 21.121071661999533 39.92912351815985 21.311274877225383 50 18.451270919655332 20.816338767996452 38.29560649761047 22.43678381473775 51 18.321990297957054 21.147935167806967 35.194430619599565 25.335643914636414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 1248.0 2 2415.0 3 30131.0 4 57847.0 5 43065.5 6 28284.0 7 26758.0 8 25232.0 9 24000.0 10 22768.0 11 21664.0 12 20560.0 13 19215.5 14 17871.0 15 16185.0 16 14499.0 17 13413.0 18 12327.0 19 11411.0 20 10495.0 21 9680.5 22 8866.0 23 8513.0 24 8160.0 25 8076.5 26 8588.0 27 9183.0 28 9924.5 29 10666.0 30 11415.0 31 12164.0 32 13104.5 33 14045.0 34 15761.5 35 17478.0 36 18290.5 37 19103.0 38 19991.5 39 20880.0 40 22136.5 41 23393.0 42 24770.5 43 26148.0 44 28697.0 45 31246.0 46 77434.5 47 123623.0 48 87719.0 49 51815.0 50 47933.0 51 44051.0 52 39835.0 53 35619.0 54 34280.0 55 32941.0 56 31244.5 57 29548.0 58 27398.0 59 25248.0 60 22913.0 61 20578.0 62 18102.5 63 15627.0 64 13531.5 65 11436.0 66 9504.5 67 7573.0 68 6276.5 69 4980.0 70 4120.0 71 3260.0 72 2750.0 73 2240.0 74 1968.5 75 1401.0 76 1105.0 77 765.5 78 426.0 79 301.0 80 176.0 81 145.5 82 115.0 83 80.0 84 45.0 85 31.0 86 17.0 87 16.5 88 16.0 89 9.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 833845.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.533585505225886 #Duplication Level Percentage of deduplicated Percentage of total 1 83.21342333007857 33.729384097322985 2 5.495667060619411 4.455181814197406 3 2.146434304662813 2.6100803525820058 4 1.3991225176393827 2.2684580880409135 5 1.02854972411033 2.0845404094301276 6 0.837536464113899 2.0369013529143167 7 0.7394525367440259 2.098086383761911 8 0.6530346958981648 2.117587014725396 9 0.5720696808324431 2.0869231790672207 >10 3.7741672889258635 24.510934502342806 >50 0.07871581737453345 2.2268425329756885 >100 0.0548899384298504 4.098068890357298 >500 0.003317523751253888 0.9409311890068238 >1k 0.002412744546366464 3.5761986492406943 >5k 0.0 0.0 >10k+ 0.001206372273183232 11.159881544034423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26485 3.1762497826334632 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG 23587 2.8287031762497827 No Hit GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC 20929 2.509938897516925 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC 20289 2.4331860237813983 No Hit GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT 4902 0.5878790422680474 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT 4828 0.5790044912423772 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC 4573 0.5484232681133784 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA 4423 0.5304343133316144 No Hit GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 3888 0.46627370794332285 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT 3785 0.4539212923265115 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGT 1563 0.18744490882598086 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTT 1292 0.15494486385359388 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTAT 984 0.11800754336837181 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATG 964 0.11560901606413661 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1992636521175998E-4 0.0 0.0 0.06871780726633847 0.0 2 1.1992636521175998E-4 0.0 0.0 0.6336909137789397 0.0 3 2.3985273042351996E-4 0.0 0.0 0.7227962031312773 0.0 4 2.3985273042351996E-4 0.0 0.0 1.4526680618100487 0.0 5 2.3985273042351996E-4 0.0 0.0 4.4029765723845555 0.0 6 2.3985273042351996E-4 0.0 0.0 4.642589450077653 0.0 7 2.3985273042351996E-4 0.0 0.0 5.241261865214758 0.0 8 2.3985273042351996E-4 0.0 0.0 5.956982412798542 0.0 9 2.3985273042351996E-4 0.0 0.0 6.051844167681044 0.0 10 2.3985273042351996E-4 0.0 0.0 9.46746697527718 0.0 11 2.3985273042351996E-4 0.0 0.0 9.627688599200091 0.0 12 2.3985273042351996E-4 0.0 0.0 12.709796185142322 0.0 13 2.3985273042351996E-4 0.0 0.0 12.94545149278343 0.0 14 2.3985273042351996E-4 0.0 0.0 13.133016327974623 0.0 15 3.597790956352799E-4 0.0 0.0 13.835425049019902 0.0 16 3.597790956352799E-4 0.0 0.0 14.139798163927349 0.0 17 3.597790956352799E-4 0.0 0.0 14.27615444117312 0.0 18 3.597790956352799E-4 0.0 0.0 14.37977082071608 0.0 19 3.597790956352799E-4 0.0 0.0 15.211220310729212 0.0 20 3.597790956352799E-4 0.0 0.0 15.388711331242616 0.0 21 3.597790956352799E-4 0.0 0.0 15.506958727341413 0.0 22 3.597790956352799E-4 0.0 0.0 15.74189447679125 0.0 23 3.597790956352799E-4 0.0 0.0 15.844671371777729 0.0 24 3.597790956352799E-4 0.0 0.0 15.956202891424665 0.0 25 4.797054608470399E-4 0.0 0.0 16.040511126168532 0.0 26 4.797054608470399E-4 0.0 0.0 16.157799111345632 0.0 27 4.797054608470399E-4 0.0 0.0 16.324017053529133 0.0 28 4.797054608470399E-4 0.0 0.0 16.41636035474219 0.0 29 4.797054608470399E-4 0.0 0.0 16.519856807919936 0.0 30 4.797054608470399E-4 0.0 0.0 16.64817801869652 0.0 31 4.797054608470399E-4 0.0 0.0 16.761148654725996 0.0 32 4.797054608470399E-4 0.0 0.0 16.887790896389618 0.0 33 4.797054608470399E-4 0.0 0.0 17.003519838818963 0.0 34 4.797054608470399E-4 0.0 0.0 17.16062337724637 0.0 35 4.797054608470399E-4 0.0 0.0 17.311490744682764 0.0 36 4.797054608470399E-4 0.0 0.0 17.431417109894525 0.0 37 4.797054608470399E-4 0.0 0.0 17.567173755314236 0.0 38 4.797054608470399E-4 0.0 0.0 17.72271825099389 0.0 39 4.797054608470399E-4 0.0 0.0 17.97540310249507 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTTG 20 7.032171E-4 45.0 1 CGTTTTT 22440 0.0 44.31818 1 GATACCT 3085 0.0 42.447327 5 CCGATGA 760 0.0 42.33553 18 CGGCTGT 2495 0.0 42.29459 9 TGATACC 3115 0.0 42.182983 4 CGATGAA 780 0.0 42.115383 19 TACGGCT 2540 0.0 41.633858 7 GGCGACT 595 0.0 41.596638 10 ATACCTG 3170 0.0 41.451103 6 ACCGGTC 60 3.6379788E-12 41.249996 17 ACGGCTG 2565 0.0 41.22807 8 CCGGTGA 105 0.0 40.714287 18 GATACGC 50 1.0804797E-9 40.5 5 GATGAAT 830 0.0 40.391567 20 GAATCTG 2455 0.0 40.23422 1 ATGATAC 9515 0.0 40.128746 3 TACCTGT 3290 0.0 40.07599 7 TACGGGA 90 0.0 40.0 4 CACAACG 45 1.9272193E-8 40.0 12 >>END_MODULE