##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933433.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 588147 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.470810868711393 31.0 28.0 31.0 16.0 33.0 2 28.744320722540454 31.0 30.0 33.0 16.0 34.0 3 28.938421857120755 31.0 30.0 33.0 16.0 34.0 4 31.964950939135964 35.0 30.0 37.0 19.0 37.0 5 33.59384473609489 35.0 33.0 37.0 28.0 37.0 6 32.61749018527681 35.0 33.0 37.0 17.0 37.0 7 32.09596240395683 35.0 31.0 35.0 25.0 37.0 8 32.828639778830805 35.0 32.0 36.0 27.0 37.0 9 32.936211525349954 35.0 31.0 37.0 25.0 39.0 10 31.94055567740718 35.0 28.0 39.0 15.0 39.0 11 32.44550597044616 35.0 29.0 39.0 17.0 39.0 12 33.34760697580707 35.0 31.0 39.0 23.0 39.0 13 33.38229898307736 35.0 32.0 39.0 24.0 39.0 14 33.599822833407295 36.0 31.0 40.0 20.0 41.0 15 34.18209563255444 37.0 32.0 40.0 25.0 41.0 16 34.37652831690037 37.0 32.0 40.0 25.0 41.0 17 32.376904073301404 36.0 27.0 39.0 18.0 41.0 18 33.08401641086327 36.0 30.0 39.0 23.0 39.0 19 32.748613866941426 36.0 30.0 37.0 20.0 39.0 20 32.32035188481791 34.0 30.0 36.0 24.0 39.0 21 32.6420503717608 35.0 31.0 37.0 23.0 39.0 22 32.74854925724351 34.0 30.0 37.0 24.0 39.0 23 33.79426571928447 35.0 32.0 38.0 27.0 40.0 24 32.06899125558746 34.0 30.0 37.0 21.0 39.0 25 31.3103203790889 34.0 29.0 37.0 18.0 39.0 26 30.373370942978543 33.0 25.0 37.0 18.0 39.0 27 32.16443338145056 34.0 30.0 37.0 22.0 39.0 28 32.17223925311189 35.0 31.0 37.0 21.0 39.0 29 32.280861757349776 35.0 30.0 38.0 21.0 40.0 30 31.328514810072992 34.0 29.0 37.0 18.0 40.0 31 31.70195716377028 35.0 30.0 37.0 20.0 40.0 32 31.42503659799336 35.0 30.0 37.0 17.0 40.0 33 31.145965209377927 35.0 30.0 38.0 15.0 40.0 34 30.299352032740114 35.0 27.0 38.0 10.0 40.0 35 29.78505373656586 35.0 25.0 38.0 8.0 40.0 36 29.149833289976826 34.0 23.0 38.0 7.0 40.0 37 29.201680872298933 35.0 23.0 38.0 7.0 40.0 38 28.993316296776147 34.0 22.0 38.0 7.0 40.0 39 28.617097426323692 34.0 21.0 37.0 7.0 40.0 40 28.47032289546661 33.0 21.0 37.0 7.0 40.0 41 27.870136207444737 33.0 19.0 37.0 7.0 40.0 42 28.40233989121767 33.0 21.0 38.0 7.0 40.0 43 28.4651218147844 34.0 21.0 38.0 7.0 40.0 44 28.456561029810576 34.0 20.0 38.0 7.0 40.0 45 28.58125264602217 34.0 20.0 38.0 7.0 40.0 46 28.360454104161036 34.0 20.0 38.0 7.0 40.0 47 28.407430455311342 34.0 20.0 38.0 7.0 40.0 48 28.177839893768056 33.0 20.0 37.0 7.0 40.0 49 28.007714057880087 33.0 20.0 37.0 7.0 39.0 50 28.18905137661163 34.0 20.0 37.0 7.0 40.0 51 26.85611590299704 31.0 18.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 25.0 10 30.0 11 49.0 12 61.0 13 75.0 14 167.0 15 339.0 16 715.0 17 1267.0 18 2310.0 19 3700.0 20 5494.0 21 7654.0 22 10513.0 23 14482.0 24 19238.0 25 26102.0 26 32946.0 27 35298.0 28 34523.0 29 35053.0 30 37449.0 31 41710.0 32 45933.0 33 51091.0 34 55735.0 35 58382.0 36 41343.0 37 21821.0 38 4546.0 39 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.65930116110428 2.5070263046483277 31.711459890129507 43.12221264411788 2 42.913591330058644 11.713058130025317 32.244149846892014 13.129200693024023 3 12.866851314382288 11.68840442950487 62.426570228191245 13.018174027921592 4 11.359915123260002 2.87700183797588 70.00817822755195 15.754904811212164 5 18.539242740335325 3.452878277029382 61.95049876986536 16.057380212769935 6 13.462280688331319 10.927030147225098 64.06527619795732 11.54541296648627 7 50.30647100129729 1.3049458723754435 45.70490030553586 2.6836828207914007 8 51.05798380336889 8.221924110809033 37.290507305146505 3.429584780675579 9 47.097409321139104 3.0512779968273236 37.36582861087449 12.485484071159082 10 25.764817299076594 19.89468619239748 42.588162483188725 11.752334025337204 11 22.446089157982613 15.119179388826263 49.54781712735081 12.88691432584031 12 18.22656580752771 13.913358395095104 51.85472339398144 16.00535240339575 13 17.08331420546224 14.478863277377934 56.4885989387007 11.949223578459128 14 14.479203328419596 17.489675200247557 51.57877197367324 16.4523494976596 15 11.910457759709733 14.70652744977021 57.88535859232471 15.497656198195351 16 14.13354144457083 14.930281035183382 50.564059665355764 20.372117854890018 17 14.569656905501516 15.50275696382027 54.2211385929028 15.70644753777542 18 14.702616862791103 14.35440459612988 53.247742486147175 17.695236054931847 19 14.51541876435653 16.619314559115324 50.549777521605996 18.315489154922155 20 16.542633049220687 16.424805363285028 54.40986692102484 12.622694666469435 21 16.599591598698964 19.422525321050692 50.2738261012978 13.704056978952542 22 14.79919135862293 14.15377448154968 53.44361188614412 17.603422273683282 23 15.016824025286196 19.383929527822126 51.640491237734786 13.958755209156894 24 15.060010507577188 16.043438120061822 51.172410978887925 17.72414039347306 25 13.848408646137786 20.595191338219866 48.75719845548817 16.799201560154177 26 14.06281082790527 15.868991935689547 52.13764586064368 17.930551375761503 27 14.879613429975839 17.116809233065883 49.938365748698885 18.065211588259398 28 12.680503343551866 17.486274689830942 52.81128697417482 17.021934992442368 29 15.87001208881453 15.90996808620974 49.61684748880807 18.60317233616766 30 14.358825259671477 18.48330434398203 50.98215242107841 16.17571797526809 31 17.66633171639063 17.114088824732594 47.44035079665458 17.7792286622222 32 17.127860891919877 20.943573630401925 46.39197343521263 15.536592042465575 33 15.442567929446211 19.301297124698415 44.876195917007145 20.37993902884823 34 16.965486519526582 21.146924153315414 43.30039938994843 18.587189937209576 35 14.794090592998007 21.609903646537347 41.69603857539016 21.89996718507448 36 18.876913424705048 21.141483336648832 40.36507879832763 19.616524440318493 37 16.376688140889947 24.537743115241597 40.33260392384897 18.752964820019486 38 19.90233734083486 24.651490188677318 38.25659231450641 17.189580155981414 39 18.18065891690343 25.999962594385416 38.23261871606928 17.586759772641873 40 17.87019231586661 23.57896920327741 38.7608880092902 19.78995047156578 41 17.579788726287816 24.423655990764214 39.41837669834242 18.57817858460555 42 17.252659624209592 22.00334270173953 40.49633850040891 20.247659173641964 43 18.418184569503882 21.205072881439506 39.78563182333668 20.59111072571993 44 19.709698425733702 21.996371655385474 38.20881514315298 20.085114775727835 45 18.177428432007645 21.11087874289931 38.426957886378744 22.2847349387143 46 19.348394193968517 23.468622640258303 37.90089892492863 19.28208424084455 47 15.468921885174966 22.298336980380757 43.6438509420264 18.58889019241788 48 18.11162855544617 23.542583741819648 38.022807223364225 20.322980479369953 49 16.702797089843184 20.983529627797132 41.323512659250156 20.99016062310953 50 17.249939215876303 20.612193890302937 40.68608698165595 21.451779912164817 51 17.450739355977333 20.820815204362177 38.824477554080865 22.903967885579625 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 99.0 1 554.5 2 1010.0 3 31369.0 4 61728.0 5 41692.0 6 21656.0 7 20227.5 8 18799.0 9 17982.0 10 17165.0 11 16190.5 12 15216.0 13 14014.0 14 12812.0 15 11704.5 16 10597.0 17 9482.5 18 8368.0 19 7705.0 20 7042.0 21 6530.0 22 6018.0 23 5649.5 24 5281.0 25 5243.5 26 5516.5 27 5827.0 28 6375.0 29 6923.0 30 7560.5 31 8198.0 32 8736.0 33 9274.0 34 10546.5 35 11819.0 36 12586.5 37 13354.0 38 13998.0 39 14642.0 40 15751.0 41 16860.0 42 17898.5 43 18937.0 44 20625.0 45 22313.0 46 39722.0 47 57131.0 48 48045.5 49 38960.0 50 36489.0 51 34018.0 52 30640.5 53 27263.0 54 25138.5 55 23014.0 56 21676.0 57 20338.0 58 18686.5 59 17035.0 60 15668.5 61 14302.0 62 12773.5 63 11245.0 64 9747.5 65 8250.0 66 7103.5 67 5957.0 68 4919.0 69 3881.0 70 3261.5 71 2642.0 72 2257.5 73 1873.0 74 1647.0 75 1151.5 76 882.0 77 653.0 78 424.0 79 303.5 80 183.0 81 135.5 82 88.0 83 63.5 84 39.0 85 34.5 86 30.0 87 24.5 88 19.0 89 12.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 588147.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.399058368599654 #Duplication Level Percentage of deduplicated Percentage of total 1 81.58131332444472 35.40552178754592 2 6.476003296612102 5.621048901298248 3 2.743171680631954 3.5715320364850727 4 1.6844336230237817 2.9241133249456355 5 1.2343571890420157 2.6784969847467517 6 0.9731270121817454 2.5339677601041934 7 0.8194863450122698 2.4895455003620524 8 0.7015149000962846 2.435606887657681 9 0.5867791989363105 2.2919098233705375 >10 3.0762388667656606 20.38881084124693 >50 0.07374611033568025 2.2773803585872656 >100 0.04384903856746466 3.6807615087056456 >500 0.002391765740043527 0.7411347200270251 >1k 0.001993138116702939 1.5116795479916303 >5k 7.972552466811757E-4 2.3804887365947396 >10k+ 7.972552466811757E-4 9.068001280330659 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41478 7.052318553014808 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG 10938 1.8597391468459414 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC 7961 1.3535731713330172 No Hit GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC 5799 0.9859779952970941 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT 2267 0.38544785572314405 No Hit GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT 1935 0.3289993828073594 No Hit GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 1729 0.29397412551623997 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC 1427 0.24262641822537565 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA 1380 0.2346352187463338 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT 944 0.1605040916641588 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCCCGAAACTTCGTATGCCG 889 0.15115268801847156 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 637 0.10830625676914105 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 629 0.10694605260249564 No Hit GAATCTTTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC 594 0.10099515937342196 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGT 591 0.10048508281092992 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10507577187335819 0.0 2 0.0 0.0 0.0 0.6160024619695417 0.0 3 0.0 0.0 0.0 0.7501525979049455 0.0 4 0.0 0.0 0.0 1.3103866890420253 0.0 5 0.0 0.0 0.0 2.6639598603750425 0.0 6 0.0 0.0 0.0 2.9009754364130056 0.0 7 0.0 0.0 0.0 3.2508879582825383 0.0 8 0.0 0.0 0.0 3.724239008275142 0.0 9 0.0 0.0 0.0 3.8570289400439006 0.0 10 0.0 0.0 0.0 6.334810855109352 0.0 11 0.0 0.0 0.0 6.759874657186043 0.0 12 0.0 0.0 0.0 8.78657886548771 0.0 13 0.0 0.0 0.0 9.003191379025992 0.0 14 0.0 0.0 0.0 9.126629907149063 0.0 15 0.0 0.0 0.0 9.564445623288055 0.0 16 0.0 0.0 0.0 9.823734542554838 0.0 17 0.0 0.0 0.0 10.036096418072352 0.0 18 0.0 0.0 0.0 10.240637119631657 0.0 19 0.0 0.0 0.0 10.911217773787845 0.0 20 0.0 0.0 0.0 11.132591001909386 0.0 21 0.0 0.0 0.0 11.369096501384858 0.0 22 0.0 0.0 0.0 11.71917904877522 0.0 23 0.0 0.0 0.0 11.943102659709222 0.0 24 0.0 0.0 0.0 12.139482136268654 0.0 25 0.0 0.0 0.0 12.300156253453643 0.0 26 0.0 0.0 0.0 12.473072208138442 0.0 27 0.0 0.0 0.0 12.647178341469054 0.0 28 0.0 0.0 0.0 12.807172356570721 0.0 29 1.7002552083067668E-4 0.0 0.0 12.999131169588555 0.0 30 1.7002552083067668E-4 0.0 0.0 13.201631564897891 0.0 31 1.7002552083067668E-4 0.0 0.0 13.372677238853552 0.0 32 1.7002552083067668E-4 0.0 0.0 13.555964750309021 0.0 33 3.4005104166135336E-4 0.0 0.0 13.727180449785513 0.0 34 3.4005104166135336E-4 0.0 0.0 13.913868471657596 0.0 35 3.4005104166135336E-4 0.0 0.0 14.12827065342508 0.0 36 3.4005104166135336E-4 0.0 0.0 14.302546812276523 0.0 37 3.4005104166135336E-4 0.0 0.0 14.476482920086305 0.0 38 3.4005104166135336E-4 0.0 0.0 14.689354872166312 0.0 39 3.4005104166135336E-4 0.0 0.0 15.021414714348623 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAGT 25 3.8884733E-5 45.000004 13 CCCGTTG 20 7.0304744E-4 45.0 1 AGATTCG 20 7.0304744E-4 45.0 34 ATAAGCG 20 7.0304744E-4 45.0 34 CGTTTTT 19010 0.0 44.372696 1 TACGGCT 1075 0.0 43.534885 7 GATACCT 1545 0.0 43.398056 5 ACGGCTG 1095 0.0 42.739723 8 TGATACC 1590 0.0 42.31132 4 CGACCAC 855 0.0 41.842102 12 GAATGAT 4380 0.0 41.712326 1 ATGATAC 4215 0.0 41.263344 3 ATACCTG 1625 0.0 41.26154 6 GGGCAAC 60 3.6379788E-12 41.249996 7 AATGATA 4175 0.0 41.227547 2 ACACGAC 115 0.0 41.08696 26 CACGACC 115 0.0 41.08696 27 ACCACCG 515 0.0 41.06796 14 ATACGGC 2630 0.0 40.979084 6 CGGTAGG 50 1.0804797E-9 40.500004 31 >>END_MODULE