##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933430.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 222276 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.168110817182242 31.0 28.0 31.0 25.0 34.0 2 28.032018751462147 31.0 25.0 33.0 16.0 34.0 3 27.967112958664003 31.0 25.0 33.0 16.0 34.0 4 32.92548903165434 35.0 32.0 37.0 28.0 37.0 5 34.21239809965988 35.0 33.0 37.0 30.0 37.0 6 33.22581385304756 35.0 32.0 37.0 28.0 37.0 7 33.776125177706994 35.0 33.0 37.0 30.0 37.0 8 33.17776997966492 35.0 32.0 37.0 28.0 37.0 9 34.862310820781374 37.0 34.0 39.0 29.0 39.0 10 34.80548507261243 37.0 33.0 39.0 28.0 39.0 11 35.1248582842952 37.0 34.0 39.0 29.0 39.0 12 35.14776674044881 37.0 34.0 39.0 28.0 39.0 13 35.17602890100596 37.0 34.0 39.0 27.0 39.0 14 36.0438238946175 38.0 34.0 40.0 29.0 41.0 15 36.11230182295884 38.0 34.0 40.0 27.0 41.0 16 36.33290143785204 38.0 34.0 40.0 30.0 41.0 17 35.39847756842844 37.0 33.0 40.0 27.0 41.0 18 35.29343248933758 37.0 33.0 39.0 27.0 40.0 19 34.54279364393817 37.0 33.0 37.0 27.0 40.0 20 33.31950817902068 35.0 32.0 37.0 25.0 39.0 21 34.180910219726826 35.0 33.0 38.0 27.0 40.0 22 34.68536864078893 35.0 33.0 38.0 29.0 40.0 23 34.83269898684518 35.0 33.0 39.0 29.0 40.0 24 34.49575302776728 35.0 33.0 38.0 27.0 40.0 25 33.570565423167594 35.0 33.0 38.0 24.0 40.0 26 33.51017203836672 35.0 32.0 38.0 24.0 40.0 27 34.16052115388076 35.0 33.0 38.0 26.0 40.0 28 33.762763411254475 35.0 33.0 38.0 24.0 40.0 29 33.688351418956614 35.0 33.0 38.0 24.0 40.0 30 33.10705159351437 35.0 32.0 38.0 21.0 40.0 31 32.977757382713385 35.0 32.0 38.0 21.0 40.0 32 32.34446813871043 35.0 31.0 38.0 18.0 40.0 33 31.5188819305728 35.0 30.0 39.0 12.0 40.0 34 30.918115316093505 35.0 28.0 39.0 10.0 40.0 35 30.47094153214922 35.0 25.0 39.0 8.0 40.0 36 29.749464629559647 35.0 22.0 39.0 7.0 40.0 37 29.571019813205204 35.0 21.0 39.0 7.0 40.0 38 29.028599578901904 35.0 21.0 38.0 7.0 40.0 39 28.822868865734492 35.0 19.0 38.0 7.0 40.0 40 28.49409292951106 34.0 18.0 38.0 7.0 40.0 41 28.05784250211449 34.0 18.0 38.0 7.0 40.0 42 28.223047022620527 34.0 18.0 38.0 7.0 40.0 43 28.190146484550738 34.0 17.0 38.0 7.0 40.0 44 28.2827880652882 35.0 17.0 39.0 7.0 40.0 45 28.19563965520344 35.0 17.0 39.0 7.0 40.0 46 27.97334844967518 34.0 16.0 38.0 7.0 40.0 47 27.77984577732189 34.0 17.0 38.0 7.0 40.0 48 27.674400295128578 34.0 17.0 38.0 7.0 40.0 49 27.907097482409256 34.0 16.0 38.0 7.0 40.0 50 27.767874174449783 34.0 15.0 38.0 7.0 40.0 51 26.624435386636435 32.0 15.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 5.0 10 15.0 11 11.0 12 14.0 13 18.0 14 31.0 15 38.0 16 131.0 17 250.0 18 498.0 19 933.0 20 1435.0 21 2188.0 22 3074.0 23 4399.0 24 6498.0 25 9375.0 26 12637.0 27 13488.0 28 12263.0 29 11328.0 30 10889.0 31 12104.0 32 13654.0 33 15615.0 34 17780.0 35 19305.0 36 19966.0 37 18675.0 38 13604.0 39 2050.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.24886177545034 2.008763879141248 24.31166657668844 39.43070776871997 2 39.18191797584984 25.318972808580327 25.221346434162932 10.2777627814069 3 9.867911965304396 25.32167215533841 54.45707138872393 10.353344490633267 4 8.866004426928683 2.1473303460562545 77.06455037880832 11.922114848206734 5 26.91428674260829 2.6314131980060824 55.77930140905901 14.674998650326621 6 10.893663733376522 21.86830786949558 58.807068689377175 8.430959707750723 7 41.640123090212164 1.1220284691104752 54.60373589591319 2.634112544764167 8 39.22870665298998 17.79319404704062 38.86024582051144 4.117853479457971 9 37.017491766992386 2.603070057046195 37.28112796703198 23.09831020892944 10 28.998632330975905 14.527434360884667 43.13421152081197 13.339721787327466 11 25.259137288776117 12.467382893339812 48.877521639763174 13.395958178120896 12 16.953247314149973 11.268423041623928 51.21875506127517 20.559574582950926 13 16.304054418830642 13.411254476416707 60.97059511598193 9.314095988770719 14 13.899836239630009 22.403678309849017 47.75459338840001 15.941892062120965 15 8.596069751120229 13.246144433047203 63.666342745055694 14.49144307077687 16 10.171138584462561 15.469056488329825 48.612985657470894 25.746819269736726 17 10.432525328870414 17.016232071838616 56.338066187982506 16.213176411308464 18 10.836977451456747 15.529341899260379 53.75119221148482 19.882488437798052 19 11.190141985639475 18.23273767748205 49.904623081214346 20.67249725566413 20 14.073494214400114 16.23522107649949 58.17947056812252 11.511814140977883 21 13.892188090482103 24.716568590401124 49.070974824092566 12.320268495024205 22 11.420486242329355 13.272688009501701 54.46696899350357 20.83985675466537 23 12.508772876963775 23.742104410732605 50.55111662977559 13.198006082528027 24 15.492000935773543 15.451060843275927 48.0258777375875 21.031060483363024 25 9.914700642444528 28.028667062570854 47.10270114632259 14.953931148662022 26 12.518220590617071 14.36277420864151 53.48665622919253 19.632348971548886 27 16.699958610016377 19.103726898090663 46.469254440425416 17.727060051467543 28 10.535100505677626 17.611887923122605 56.27193219240944 15.581079378790333 29 20.989670499739063 13.322176033399918 47.809929996940745 17.87822346992028 30 15.403372383883102 22.306501826557973 50.2438409904803 12.046284799078624 31 18.921520991919955 14.449153304900214 47.076157569868094 19.553168133311736 32 20.34902553582033 26.47879213230398 41.158289693894076 12.01389263798161 33 14.94223397937699 19.405603843869784 40.56263384261009 25.089528334143136 34 27.049703971638863 19.791610430275874 39.34837769259839 13.810307905486871 35 19.062336914466698 23.857276539077542 37.310370890244556 19.770015656211196 36 21.169177059151686 19.159063506631398 40.138836401590815 19.532923032626105 37 19.824452482499236 25.448091561842034 40.074052079396786 14.653403876261944 38 16.312152459104897 26.516582986917165 38.18046032860048 18.99080422537746 39 23.382641400781008 25.96051755475175 35.23592290665659 15.420918137810649 40 16.078658964530586 30.78829923158596 36.71111590994979 16.42192589393367 41 20.998668322266013 23.456873436628335 33.55018085623279 21.99427738487286 42 15.345336428584282 27.20221706347064 40.65486152351131 16.797584984433765 43 20.40346236210837 21.573179290611673 32.255844085731255 25.76751426154871 44 22.59128290953589 21.254656373157697 36.054274865482554 20.09978585182386 45 16.189332181612052 21.29244722777088 37.111519012399 25.406701578218073 46 24.13171012614947 26.122028469110475 31.82124925767964 17.92501214706041 47 15.016915906350665 20.99551908438158 45.57802011913117 18.409544890136587 48 21.073350249239684 23.053770987421043 33.17767100361713 22.695207759722148 49 16.14074393996653 19.834799978405226 43.068977307491586 20.955478774136658 50 19.059637567708617 18.706922924652233 37.701776170166816 24.53166333747233 51 18.994853245514584 18.929169141067863 35.692562399899224 26.38341521351833 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 26.0 1 310.0 2 594.0 3 7746.5 4 14899.0 5 11494.5 6 8090.0 7 8097.5 8 8105.0 9 7986.5 10 7868.0 11 7434.5 12 7001.0 13 6391.5 14 5782.0 15 5204.5 16 4627.0 17 4187.0 18 3747.0 19 3471.5 20 3196.0 21 2953.0 22 2710.0 23 2552.0 24 2394.0 25 2393.0 26 2329.0 27 2266.0 28 2349.5 29 2433.0 30 2464.5 31 2496.0 32 2689.0 33 2882.0 34 3073.0 35 3264.0 36 3385.0 37 3506.0 38 3790.0 39 4074.0 40 4796.0 41 5518.0 42 5946.0 43 6374.0 44 7193.0 45 8012.0 46 26803.0 47 45594.0 48 30548.0 49 15502.0 50 13604.0 51 11706.0 52 9605.5 53 7505.0 54 6893.5 55 6282.0 56 6042.0 57 5802.0 58 5096.0 59 4390.0 60 3984.0 61 3578.0 62 3365.0 63 3152.0 64 2629.0 65 2106.0 66 1806.5 67 1507.0 68 1264.0 69 1021.0 70 856.0 71 691.0 72 586.5 73 482.0 74 412.5 75 261.0 76 179.0 77 129.0 78 79.0 79 68.0 80 57.0 81 44.5 82 32.0 83 19.0 84 6.0 85 5.0 86 4.0 87 2.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 222276.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.26243049182098 #Duplication Level Percentage of deduplicated Percentage of total 1 86.23988685759447 37.30947110799187 2 4.916703063580209 4.254170490741241 3 1.7605707036043343 2.284997030718566 4 1.13974334976394 1.9723226979071065 5 0.812171127888355 1.7568248483866904 6 0.6489049728583016 1.6843923770447553 7 0.5573927330962334 1.6879915060555344 8 0.503317318691375 1.7419784412172254 9 0.46068093425677503 1.7937159207471791 >10 2.8431189035169817 19.99136209037413 >50 0.07175391526798527 2.0901941730101314 >100 0.03327717809529752 2.549083121884504 >500 0.002079823630956095 0.5551656499127211 >1k 0.006239470892868285 4.956900430095916 >5k 0.0031197354464341425 10.835177886951358 >10k+ 0.0010399118154780474 4.536252226961075 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 10083 4.536252226961075 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 9680 4.354946103043064 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 7618 3.427270600514675 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6786 3.0529611833936188 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAAGACT 2241 1.008206014144577 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTA 1871 0.8417462973960301 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 1770 0.7963072936349405 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 1737 0.7814608864654753 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTC 1733 0.7796613219600856 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1666 0.7495186164948082 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGT 726 0.3266209577282298 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTAT 508 0.22854469218449133 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATG 439 0.19750220446651912 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTT 389 0.1750076481491479 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGTAAGAC 311 0.13991614029404884 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCGGTAAGACT 275 0.12372005974554158 No Hit CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 240 0.10797387032338174 TruSeq Adapter, Index 15 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 238 0.10707408807068688 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12057082186110961 0.0 2 0.0 0.0 0.0 1.046446759884108 0.0 3 0.0 0.0 0.0 1.1652180172398279 0.0 4 0.0 0.0 0.0 2.1347333945185265 0.0 5 0.0 0.0 0.0 6.170706688981267 0.0 6 0.0 0.0 0.0 6.469884288002303 0.0 7 0.0 0.0 0.0 7.453346290197772 0.0 8 0.0 0.0 0.0 8.436358401266894 0.0 9 0.0 0.0 0.0 8.584822472961543 0.0 10 0.0 0.0 0.0 14.061347153988734 0.0 11 0.0 0.0 0.0 14.357825406251687 0.0 12 0.0 0.0 0.0 19.609404524105166 0.0 13 0.0 0.0 0.0 19.97516600982562 0.0 14 0.0 0.0 0.0 20.295488491784987 0.0 15 0.0 0.0 0.0 21.392772948946355 0.0 16 0.0 0.0 0.0 21.899350357213553 0.0 17 0.0 0.0 0.0 22.128344940524393 0.0 18 0.0 0.0 0.0 22.28130792348252 0.0 19 0.0 0.0 0.0 23.66202379024276 0.0 20 0.0 0.0 0.0 23.960301607011104 0.0 21 0.0 0.0 0.0 24.125861541506957 0.0 22 0.0 0.0 0.0 24.540211268872934 0.0 23 0.0 0.0 0.0 24.69812305422088 0.0 24 0.0 0.0 0.0 24.82184311396642 0.0 25 0.0 0.0 0.0 24.919019597257464 0.0 26 0.0 0.0 0.0 25.058035955298816 0.0 27 0.0 0.0 0.0 25.266335546797674 0.0 28 0.0 0.0 0.0 25.361712465583327 0.0 29 0.0 0.0 0.0 25.484982634202524 0.0 30 0.0 0.0 0.0 25.611851931832497 0.0 31 0.0 0.0 0.0 25.730623189188215 0.0 32 0.0 0.0 0.0 25.85884216019723 0.0 33 0.0 0.0 0.0 25.97626374417391 0.0 34 0.0 0.0 0.0 26.176015404272167 0.0 35 0.0 0.0 0.0 26.301535028523098 0.0 36 0.0 0.0 0.0 26.433353128542894 0.0 37 0.0 0.0 0.0 26.57146970433155 0.0 38 0.0 0.0 0.0 26.719033993773508 0.0 39 0.0 0.0 0.0 26.84995231154061 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 30 2.157576E-6 45.000004 4 TTCGGGA 75 0.0 45.000004 4 TCGTTTG 25 3.8806233E-5 45.0 1 GATACCG 20 7.020997E-4 45.0 27 GACACTG 20 7.020997E-4 45.0 29 ACTTGAC 20 7.020997E-4 45.0 26 GTGGGAT 45 3.8198777E-10 45.0 5 ACCGACT 50 2.1827873E-11 45.0 17 GTGATAC 20 7.020997E-4 45.0 3 TTCCGAT 20 7.020997E-4 45.0 13 TACGGGA 20 7.020997E-4 45.0 4 GCACCGA 50 2.1827873E-11 45.0 9 GAAACCG 20 7.020997E-4 45.0 21 CTTGACT 20 7.020997E-4 45.0 27 CGGGATA 25 3.8806233E-5 45.0 6 CGGGAAC 20 7.020997E-4 45.0 6 CAAGCAG 25 3.8806233E-5 45.0 10 AACTAGT 20 7.020997E-4 45.0 43 TATACTA 25 3.8806233E-5 45.0 44 CACCGAC 55 1.8189894E-12 45.0 16 >>END_MODULE