##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933429.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 153009 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.749060512780293 31.0 25.0 31.0 16.0 33.0 2 27.515054669986732 31.0 25.0 33.0 16.0 34.0 3 27.644328111418282 31.0 25.0 33.0 16.0 34.0 4 31.307073440124437 35.0 28.0 35.0 19.0 37.0 5 33.55194138906862 35.0 33.0 37.0 28.0 37.0 6 31.648465122966623 35.0 31.0 37.0 17.0 37.0 7 32.38149389905169 35.0 32.0 35.0 26.0 37.0 8 32.048624590710354 35.0 32.0 36.0 17.0 37.0 9 33.201582913423394 35.0 32.0 38.0 26.0 39.0 10 32.039755831356324 35.0 28.0 39.0 17.0 39.0 11 32.73287845812992 37.0 30.0 39.0 17.0 39.0 12 33.51992366462103 37.0 31.0 39.0 25.0 39.0 13 33.64133482344176 35.0 32.0 39.0 25.0 39.0 14 33.83244776451058 36.0 32.0 40.0 21.0 41.0 15 34.21122286924299 37.0 32.0 40.0 25.0 41.0 16 34.50567613669784 37.0 32.0 40.0 25.0 41.0 17 32.30218483880033 35.0 27.0 40.0 18.0 41.0 18 33.09045873118575 36.0 30.0 39.0 23.0 39.0 19 32.739329059074954 36.0 30.0 37.0 21.0 39.0 20 31.840355796064284 34.0 30.0 35.0 22.0 39.0 21 32.5186230875308 35.0 31.0 37.0 24.0 39.0 22 32.70487356952859 34.0 30.0 37.0 25.0 39.0 23 33.48923265951676 35.0 32.0 38.0 26.0 39.0 24 32.133567306498314 35.0 31.0 37.0 21.0 39.0 25 31.426327863066877 34.0 30.0 37.0 18.0 39.0 26 30.45178388199387 33.0 25.0 37.0 18.0 39.0 27 32.141070133129425 34.0 30.0 37.0 22.0 39.0 28 32.109921638596425 35.0 30.0 37.0 21.0 39.0 29 32.112607755099376 35.0 30.0 37.0 21.0 40.0 30 31.238999013129945 34.0 29.0 37.0 18.0 39.0 31 31.651700226784044 34.0 30.0 37.0 20.0 39.0 32 31.367952211961388 35.0 30.0 37.0 18.0 39.0 33 31.096981223326733 35.0 30.0 37.0 15.0 40.0 34 30.127253952381885 35.0 26.0 37.0 10.0 40.0 35 29.64396865543857 35.0 24.0 37.0 8.0 40.0 36 28.81799109856283 34.0 22.0 37.0 7.0 40.0 37 28.73444699331412 34.0 21.0 37.0 7.0 40.0 38 28.3644687567398 33.0 21.0 37.0 7.0 40.0 39 28.05178780333183 33.0 20.0 37.0 7.0 39.0 40 27.777810455594114 33.0 18.0 37.0 7.0 39.0 41 27.356501905116694 33.0 18.0 37.0 7.0 39.0 42 27.766007228332974 33.0 18.0 37.0 7.0 40.0 43 27.786613859315466 33.0 18.0 37.0 7.0 40.0 44 27.707291727937573 33.0 18.0 37.0 7.0 40.0 45 27.77450999614402 34.0 18.0 37.0 7.0 40.0 46 27.410394159820665 33.0 17.0 37.0 7.0 40.0 47 27.39754524243672 33.0 18.0 37.0 7.0 40.0 48 27.20641269467809 33.0 17.0 37.0 7.0 39.0 49 27.242469397225 33.0 17.0 37.0 7.0 39.0 50 27.28044755537256 33.0 17.0 37.0 7.0 40.0 51 25.617009456960048 31.0 14.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 7.0 11 16.0 12 11.0 13 22.0 14 40.0 15 95.0 16 209.0 17 377.0 18 575.0 19 1043.0 20 1536.0 21 2079.0 22 2892.0 23 3894.0 24 5404.0 25 7290.0 26 9293.0 27 10063.0 28 9718.0 29 9798.0 30 10427.0 31 11418.0 32 12520.0 33 12996.0 34 13549.0 35 13589.0 36 9029.0 37 4253.0 38 846.0 39 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.632897411263393 1.9881183459796483 26.686665490265277 41.69231875249169 2 43.06805482030469 19.9027508185793 26.418053839970195 10.611140521145815 3 10.327497075335437 19.811252932834016 59.253377252318494 10.607872739512054 4 9.39421864073355 2.207059715441575 76.0216719277951 12.377049716029775 5 23.616257867184284 2.6286035461966293 59.912815586011284 13.842323000607806 6 11.213065898084427 17.30617153239352 61.72251305478763 9.758249514734427 7 41.22306530988374 1.1149670934389482 54.93859838310164 2.7233692135756717 8 40.679306446026054 14.395885209366769 40.20417099647734 4.7206373481298485 9 37.49844780372397 2.4985458371729767 39.787855616336294 20.215150742766767 10 26.568371795123163 14.627897705363738 44.74050546046311 14.063225039049989 11 22.8777392179545 13.120143259546824 51.43292224640381 12.569195276094868 12 16.7820193583384 11.927402963224386 52.89819553098184 18.39238214745538 13 15.725218777980379 13.837094549993791 61.33626126567718 9.101425406348646 14 12.949565058264549 19.483821213131254 50.61140194367651 16.955211784927684 15 8.279251547294605 13.787424269160637 63.326993836963844 14.60633034658092 16 10.032089615643525 13.517505506212052 51.056473802194645 25.393931075949784 17 9.944513067858754 16.023240462979302 57.630596892993225 16.401649576168722 18 10.466051016606865 14.087406623139815 56.09277885614572 19.3537635041076 19 11.462070858576947 17.40681920671333 51.64402093994471 19.487088994765013 20 13.52273395682607 15.354652340711986 59.7899469965819 11.332666705880046 21 13.783502931200125 22.649648059918043 50.64342620368737 12.923422805194464 22 11.086275970694533 13.39659758576293 55.48366435961284 20.033462083929702 23 11.917599618323106 22.38691841656373 51.07085204138318 14.624629923729977 24 14.08609951048631 14.4377128142789 50.91269141030919 20.563496264925593 25 10.043853629525062 23.76004025906973 49.45395368899869 16.742152422406527 26 12.175754367390153 14.92330516505565 55.19087112522792 17.710069342326268 27 14.267134612996621 18.128998947774313 50.02385480592645 17.580011633302618 28 10.2993941532851 16.65653654360201 58.49786613859316 14.546203164519733 29 18.511982955251 13.334509734721486 50.89569894581365 17.25780836421387 30 14.071067714971013 21.559516106895675 52.47991948186055 11.889496696272769 31 17.783921207249247 15.03637040958375 48.73896306753198 18.44074531563503 32 18.45446999849682 24.96650523825396 44.53594233018973 12.043082433059492 33 13.937088667986849 18.11854204654628 44.24118842682457 23.703180858642302 34 23.623446986778557 19.557673078054233 42.028246704442225 14.790633230724989 35 18.11658137756603 21.703298498781116 40.547941624348894 19.63217849930396 36 19.90013659327229 18.06298975877236 43.27719284486534 18.759680803090014 37 18.04926507591057 24.49398401401225 42.88179126718036 14.574959642896824 38 15.62457110366057 25.991281558601127 41.47860583364377 16.905541504094533 39 21.16150030390369 24.83710108555706 38.67550274820435 15.325895862334896 40 15.979452189086915 28.600278414995195 39.11142481814795 16.308844577769936 41 19.780535785476673 21.43599396113954 37.30630224365887 21.477168009724917 42 14.874288440549249 24.730571404296477 42.73866243162167 17.6564777235326 43 18.957054813769126 19.745897300158813 36.771039612048966 24.5260082740231 44 21.724865857563934 19.96483866962074 39.19834780960597 19.111947663209353 45 15.963113280918115 20.58310295472815 40.17345384911999 23.280329915233743 46 21.764079237169057 25.117476749733676 35.34694037605631 17.771503637040958 47 14.716781365802012 20.673947284146685 46.4652406067617 18.144030743289612 48 20.173323137854638 21.924854093550053 36.61745387526224 21.284368893333074 49 15.531112548935031 19.503427902933815 43.76278519564208 21.20267435248907 50 18.201543700043786 18.06625754040612 39.23690763288434 24.49529112666575 51 18.32506584579992 18.158408982478154 38.270951381944855 25.24557378977707 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 31.0 1 123.0 2 215.0 3 7897.0 4 15579.0 5 10629.0 6 5679.0 7 5648.5 8 5618.0 9 5592.0 10 5566.0 11 5190.0 12 4814.0 13 4241.5 14 3669.0 15 3333.0 16 2997.0 17 2678.0 18 2359.0 19 2171.0 20 1983.0 21 1869.5 22 1756.0 23 1628.0 24 1500.0 25 1463.0 26 1436.5 27 1447.0 28 1432.0 29 1417.0 30 1436.5 31 1456.0 32 1623.5 33 1791.0 34 1959.0 35 2127.0 36 2193.0 37 2259.0 38 2500.0 39 2741.0 40 3286.0 41 3831.0 42 4209.5 43 4588.0 44 5215.0 45 5842.0 46 14238.0 47 22634.0 48 18136.5 49 13639.0 50 11865.0 51 10091.0 52 8235.5 53 6380.0 54 5432.0 55 4484.0 56 4127.0 57 3770.0 58 3371.5 59 2973.0 60 2679.5 61 2386.0 62 2160.0 63 1934.0 64 1594.5 65 1255.0 66 1088.5 67 922.0 68 798.0 69 674.0 70 548.5 71 423.0 72 373.5 73 324.0 74 266.5 75 161.5 76 114.0 77 81.0 78 48.0 79 40.5 80 33.0 81 25.0 82 17.0 83 11.0 84 5.0 85 3.0 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 153009.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.82475540654472 #Duplication Level Percentage of deduplicated Percentage of total 1 84.34736722003538 38.65197472044128 2 6.015745336299846 5.51340117248005 3 2.2961948770608704 3.1566770582122623 4 1.5132066860630955 2.7736930507355777 5 1.0282959666837812 2.356070557941036 6 0.8842489588681615 2.4312295355175184 7 0.7287922870671459 2.3377709807919795 8 0.618974271207713 2.269147566483017 9 0.4535341434194763 1.8704782071642845 >10 1.995264989446061 14.498493552666837 >50 0.0556221119288037 1.8201543700043787 >100 0.049917279936105875 4.126554647112261 >500 0.005704831992697815 1.987464789652896 >1k 0.004278623994523361 5.644112437830454 >5k 0.0014262079981744538 3.565149762432275 >10k+ 0.0014262079981744538 6.997627590533891 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10707 6.997627590533891 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 5455 3.565149762432275 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 4610 3.0128946663268175 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 2556 1.670489971178166 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAAGACT 1470 0.9607278003254711 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 942 0.6156500598004039 TruSeq Adapter, Index 14 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 743 0.4855923507767517 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTA 732 0.47840323118247946 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTC 624 0.4078191478932612 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 459 0.29998235397917766 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGGTAAGACTCGTATGCCG 440 0.2875647837708893 No Hit CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 328 0.21436647517466292 TruSeq Adapter, Index 15 (95% over 23bp) GAATCTTTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 318 0.20783091190714273 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGT 299 0.19541334169885433 No Hit GAATGATACGGCTGCCTCCTATACACATCTGACGCGGTAAGACTCGTATGC 211 0.13790038494467646 No Hit GAATGACTCTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 204 0.1333254906574123 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 192 0.12548281473638806 No Hit TCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 191 0.12482925840963603 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATG 189 0.12352214575613199 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCC 189 0.12352214575613199 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 188 0.12286858942937998 No Hit GAATCTGTCTCTTATCCACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 175 0.1143723571816037 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 173 0.11306524452809966 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTAT 172 0.11241168820134763 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 170 0.11110457554784359 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGTAAGAC 160 0.10456901228032339 No Hit CCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 158 0.10326189962681932 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 158 0.10326189962681932 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTT 157 0.10260834330006732 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2744936572358489 0.0 2 0.0 0.0 0.0 1.4129887784378696 0.0 3 0.0 0.0 0.0 1.6855217666934625 0.0 4 0.0 0.0 0.0 2.6135717506813325 0.0 5 0.0 0.0 0.0 4.968335195968865 0.0 6 0.0 0.0 0.0 5.355894097732813 0.0 7 0.0 0.0 0.0 5.916645426086047 0.0 8 0.0 0.0 0.0 6.654510518989079 0.0 9 0.0 0.0 0.0 6.851884529668189 0.0 10 0.0 0.0 0.0 11.78623479664595 0.0 11 0.0 0.0 0.0 12.648929147958617 0.0 12 0.0 0.0 0.0 16.83691808978557 0.0 13 0.0 0.0 0.0 17.2029096327667 0.0 14 0.0 0.0 0.0 17.40681920671333 0.0 15 0.0 0.0 0.0 18.174094334320202 0.0 16 0.0 0.0 0.0 18.63877288264089 0.0 17 0.0 0.0 0.0 19.050513368494663 0.0 18 0.0 0.0 0.0 19.370755968603152 0.0 19 0.0 0.0 0.0 20.832761471547425 0.0 20 0.0 0.0 0.0 21.27456554843179 0.0 21 0.0 0.0 0.0 21.67780980203779 0.0 22 0.0 0.0 0.0 22.398028874118516 0.0 23 0.0 0.0 0.0 22.78689488853597 0.0 24 0.0 0.0 0.0 23.033939180048232 0.0 25 0.0 0.0 0.0 23.268565901352208 0.0 26 0.0 0.0 0.0 23.463979243051064 0.0 27 0.0 0.0 0.0 23.682267056186237 0.0 28 0.0 0.0 0.0 23.86330215869655 0.0 29 0.0 0.0 0.0 24.06132972570241 0.0 30 0.0 0.0 0.0 24.30053134129365 0.0 31 6.535563267520211E-4 0.0 0.0 24.522086936062585 0.0 32 0.0013071126535040421 0.0 0.0 24.75017809409904 0.0 33 0.0013071126535040421 0.0 0.0 24.952780555392167 0.0 34 0.0013071126535040421 0.0 0.0 25.163225692606318 0.0 35 0.0019606689802560634 0.0 0.0 25.397852413910293 0.0 36 0.0019606689802560634 0.0 0.0 25.58738374866838 0.0 37 0.0019606689802560634 0.0 0.0 25.766458182198434 0.0 38 0.0019606689802560634 0.0 0.0 25.983438882680105 0.0 39 0.0019606689802560634 0.0 0.0 26.200419583161775 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCTA 25 3.874916E-5 45.000004 13 TCTTGCG 35 1.2027158E-7 45.000004 1 CTCGTAA 25 3.874916E-5 45.000004 33 GGGCTGC 25 3.874916E-5 45.000004 7 GAATGAC 100 0.0 45.000004 1 CCGATGA 50 2.1827873E-11 45.000004 18 CATGCAC 25 3.874916E-5 45.000004 45 GGACTAA 35 1.2027158E-7 45.000004 8 GATCCGG 35 1.2027158E-7 45.000004 5 ACCGACT 25 3.874916E-5 45.000004 17 GAATAGC 25 3.874916E-5 45.000004 27 ACTTACT 25 3.874916E-5 45.000004 38 GCGGGAC 35 1.2027158E-7 45.000004 5 TGCCTTG 25 3.874916E-5 45.000004 1 CGAATAG 25 3.874916E-5 45.000004 26 AACGAAT 25 3.874916E-5 45.000004 24 TCGTAAC 25 3.874916E-5 45.000004 34 TGCTACG 50 2.1827873E-11 45.000004 4 CGATGAA 50 2.1827873E-11 45.000004 19 CGCACTT 25 3.874916E-5 45.000004 35 >>END_MODULE