SRR2933428.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933428.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	666946
Sequences flagged as poor quality	0
Sequence length	51
%GC	34

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28151	4.220881450672168	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG	19872	2.979551567893053	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC	19406	2.9096808437264787	No Hit
GAATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC	16718	2.50664971376993	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGGTAGT	4634	0.6948088750813409	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTA	4570	0.6852128957966612	No Hit
GAACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCT	4258	0.6384324967838475	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTC	3979	0.596600024589697	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT	3346	0.5016897919771616	No Hit
GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC	3286	0.4926935613977743	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGT	1750	0.26239005856546105	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTAT	1182	0.17722574241392858	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATG	1048	0.1571341607866304	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	821	0.12309842176128202	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTT	785	0.11770068341364968	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	766	0.1148518770635104	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	686	0.10285690295766074	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACGA	20	7.031155E-4	45.0	13
CTCGTAG	25	3.889038E-5	45.0	1
TCGTACA	20	7.031155E-4	45.0	34
TATCGTG	25	3.889038E-5	45.0	1
TGCACGG	35	1.2109012E-7	45.0	2
ACGAATG	20	7.031155E-4	45.0	21
CGTTTTT	22330	0.0	44.445812	1
GATACCT	2400	0.0	43.6875	5
CGATGAA	560	0.0	43.392857	19
TGATACC	2420	0.0	43.326447	4
TACGGCT	2265	0.0	42.81457	7
CCGATGA	545	0.0	42.522938	18
ACGGCTG	2280	0.0	42.43421	8
CACCGGT	150	0.0	42.0	16
ATACCTG	2540	0.0	41.45669	6
CGGCTGT	2360	0.0	41.28178	9
ATGATGC	120	0.0	41.250004	3
ATGATAC	8060	0.0	41.008068	3
GAATGAT	8370	0.0	40.94086	1
GATGAAT	630	0.0	40.714287	20