##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933428.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 666946 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.41823326026395 31.0 28.0 33.0 25.0 34.0 2 28.50352202427183 31.0 27.0 33.0 16.0 34.0 3 28.44470167000027 31.0 26.0 33.0 16.0 34.0 4 33.16137438413305 35.0 32.0 37.0 28.0 37.0 5 34.34252248307959 35.0 33.0 37.0 32.0 37.0 6 33.60783331783983 35.0 33.0 37.0 28.0 37.0 7 33.921477900759584 35.0 33.0 37.0 30.0 37.0 8 33.52084426625244 35.0 33.0 37.0 28.0 37.0 9 34.994882644172094 37.0 34.0 39.0 29.0 39.0 10 35.051986217774754 37.0 34.0 39.0 28.0 39.0 11 35.33505711107046 37.0 34.0 39.0 30.0 39.0 12 35.36900588653354 37.0 34.0 39.0 30.0 39.0 13 35.43832334251948 37.0 34.0 39.0 30.0 39.0 14 36.280841327483785 38.0 35.0 40.0 29.0 41.0 15 36.48442752486708 38.0 34.0 41.0 30.0 41.0 16 36.48085002384001 38.0 34.0 41.0 30.0 41.0 17 35.70769297664279 38.0 33.0 40.0 27.0 41.0 18 35.4054960971353 38.0 34.0 39.0 27.0 40.0 19 34.64288713029241 37.0 33.0 37.0 27.0 40.0 20 33.66114048213798 35.0 32.0 37.0 27.0 39.0 21 34.15566177771514 35.0 33.0 38.0 27.0 40.0 22 34.58210859649807 35.0 33.0 38.0 29.0 40.0 23 34.8369478188639 35.0 33.0 39.0 30.0 40.0 24 34.35264474185316 35.0 33.0 38.0 27.0 40.0 25 33.485782956941044 35.0 33.0 38.0 24.0 40.0 26 33.31209573188834 35.0 32.0 38.0 24.0 40.0 27 34.1132415517898 35.0 33.0 38.0 26.0 40.0 28 33.765069435906355 35.0 33.0 38.0 24.0 40.0 29 33.709958527377026 35.0 33.0 39.0 24.0 40.0 30 33.047012801636114 35.0 33.0 38.0 21.0 40.0 31 32.92949354220582 35.0 33.0 38.0 21.0 40.0 32 32.10753494285894 35.0 31.0 38.0 16.0 40.0 33 31.259401810641343 35.0 30.0 39.0 11.0 40.0 34 30.429830900852544 35.0 25.0 39.0 8.0 40.0 35 29.834338911995875 35.0 22.0 39.0 7.0 40.0 36 29.156466940351994 35.0 20.0 39.0 7.0 40.0 37 28.99265007961664 35.0 18.0 39.0 7.0 40.0 38 28.810362458130044 35.0 18.0 39.0 7.0 40.0 39 28.267946730319995 35.0 18.0 38.0 7.0 40.0 40 28.047937914014028 34.0 17.0 38.0 7.0 40.0 41 27.47576865293442 33.0 15.0 38.0 7.0 40.0 42 27.675186596815934 34.0 15.0 38.0 7.0 40.0 43 27.54894099372363 34.0 15.0 38.0 7.0 40.0 44 27.660926071975844 34.0 15.0 38.0 7.0 40.0 45 27.81985498076306 34.0 15.0 39.0 7.0 40.0 46 27.57846662248518 34.0 15.0 38.0 7.0 40.0 47 27.49341925733118 34.0 15.0 38.0 7.0 40.0 48 27.433712774347548 34.0 15.0 38.0 7.0 40.0 49 27.575634309224434 34.0 15.0 38.0 7.0 40.0 50 27.413661675757858 34.0 15.0 38.0 7.0 40.0 51 26.263779976189976 31.0 13.0 37.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 18.0 9 34.0 10 33.0 11 37.0 12 43.0 13 72.0 14 111.0 15 171.0 16 327.0 17 711.0 18 1471.0 19 2639.0 20 4297.0 21 6596.0 22 9781.0 23 14053.0 24 21037.0 25 30594.0 26 39837.0 27 41628.0 28 37721.0 29 33573.0 30 32830.0 31 34333.0 32 38015.0 33 44030.0 34 49572.0 35 58001.0 36 59992.0 37 57353.0 38 41894.0 39 6137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.379278082483438 2.0055596704980614 25.867911345146382 44.747250901872114 2 43.31115262704927 18.508544919678656 27.077304609368674 11.102997843903404 3 10.27834337412624 18.632542964497876 59.57948619528418 11.509627466091708 4 9.505117355827908 2.4070914286913783 75.1138772854174 12.973913930063302 5 21.85394319780012 2.8258659621618545 60.7501956680151 14.569995172022923 6 11.317258068869144 16.115697522737975 63.50559115730508 9.061453251087794 7 42.52488207441082 1.1545162576880288 53.727888014921746 2.592713652979402 8 40.889517292254546 12.912289750594502 42.61799306090748 3.5801998962434736 9 38.507615309185454 2.5462331283192343 41.69722886110719 17.24892270138812 10 26.56856777010433 14.552302585216795 47.18657882347296 11.692550821205915 11 22.87096706479985 12.766700752384752 52.14350187271533 12.218830310100067 12 16.060670579027388 11.183664044765242 54.69198405867941 18.063681317527955 13 16.17837126244104 12.214032320457727 61.62253015986302 9.985066257238218 14 13.802916577953836 18.424730038114028 53.375385713386095 14.39696767054604 15 9.62821577758919 12.501012075940181 64.00683113775328 13.863941008717347 16 11.855382594692824 14.634917969370834 52.322077049716164 21.187622386220173 17 12.897595907314836 15.192684265292842 57.6950757632552 14.214644064137127 18 12.414198450849094 13.738743466487541 56.24158477597887 17.605473306684498 19 12.365618805720404 16.052873845858585 53.432811651917845 18.148695696503164 20 13.707106722283363 16.101303553810954 59.190399222725674 11.001190501180005 21 14.095294071783924 20.760001559346634 53.42396535851478 11.720739010354661 22 11.930501120030707 12.041904442038785 57.88624566306717 18.141348774863335 23 12.888299802382802 19.728133911890918 55.23250757932426 12.151058706402019 24 14.225589478008715 15.370059944883094 52.39239758541171 18.01195299169648 25 11.695099753203408 23.2759473780486 50.679065471567405 14.34988739718058 26 11.90081355911873 13.202718061132385 56.3442917417602 18.552176637988683 27 14.580340837189217 16.758778071987837 51.7872511417716 16.873629949051345 28 9.940684853046573 16.414222440797303 57.16519778212928 16.479894924026834 29 15.604261814299807 13.986739556125983 54.49721566663568 15.911782962938528 30 12.873605959103134 21.327963583258615 52.82916458004097 12.969265877597286 31 16.159479178224323 14.371178476218466 49.628605614247626 19.84073673130958 32 20.751455140296216 20.116021387038828 46.68353959690889 12.448983875756058 33 17.802040944844112 16.22515166145385 44.71396484872838 21.258842544973653 34 17.71087914163965 19.103345698152474 49.14895658718997 14.036818573017907 35 16.062319887966943 26.54847618847703 40.466694455023344 16.922509468532684 36 19.812998353689803 19.52646840973632 41.37726292683366 19.283270309740217 37 19.04217133021264 25.055701661004036 41.149658293175165 14.752468715608162 38 22.225937332257782 21.56141576679371 35.79165329726845 20.420993603680056 39 22.751767009622966 20.2020853262483 41.265709667649254 15.780437996479474 40 20.872604378765296 24.69675206088649 38.5578442632537 15.872799297094517 41 20.98565700971293 23.00456108890375 38.75861014235035 17.251171759032964 42 17.622116333256365 24.784465309035514 40.96103732536067 16.632381032347446 43 23.61105696713077 20.02995744782936 36.941371565314135 19.417614019725736 44 20.352172439747747 21.992185274370037 38.095587948649516 19.5600543372327 45 16.589049188390064 21.115502604408753 37.89332269778963 24.402125509411558 46 23.752297787227153 22.437798562402353 35.78940423962359 18.020499410746897 47 16.41977011632126 20.07853709295805 45.58944802127908 17.912244769441603 48 18.39309329390985 23.086426787176173 37.014241033007174 21.506238885906807 49 17.065999346273912 20.732712993255824 42.47735198951639 19.72393567095387 50 19.591091332731587 19.123587216956096 39.57306888413755 21.712252566174772 51 17.479376141396756 19.887367193146073 38.05450516233698 24.57875150312019 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 59.0 1 1232.5 2 2406.0 3 29644.5 4 56883.0 5 41954.0 6 27025.0 7 25642.5 8 24260.0 9 23780.0 10 23300.0 11 21989.5 12 20679.0 13 19449.0 14 18219.0 15 16660.5 16 15102.0 17 13864.0 18 12626.0 19 11604.5 20 10583.0 21 9848.0 22 9113.0 23 8655.5 24 8198.0 25 8049.5 26 8123.0 27 8345.0 28 8463.0 29 8581.0 30 8828.5 31 9076.0 32 9769.5 33 10463.0 34 11209.5 35 11956.0 36 11999.5 37 12043.0 38 13075.5 39 14108.0 40 14925.5 41 15743.0 42 16714.0 43 17685.0 44 20834.5 45 23984.0 46 63844.5 47 103705.0 48 71605.0 49 39505.0 50 35208.0 51 30911.0 52 26587.0 53 22263.0 54 21386.0 55 20509.0 56 19599.0 57 18689.0 58 17686.5 59 16684.0 60 14765.5 61 12847.0 62 11382.0 63 9917.0 64 8678.0 65 7439.0 66 6519.0 67 5599.0 68 4697.5 69 3796.0 70 3154.5 71 2513.0 72 2104.5 73 1696.0 74 1419.5 75 912.5 76 682.0 77 520.0 78 358.0 79 282.0 80 206.0 81 152.0 82 98.0 83 60.5 84 23.0 85 17.5 86 12.0 87 11.5 88 11.0 89 6.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 666946.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.64816290619601 #Duplication Level Percentage of deduplicated Percentage of total 1 85.26064955858081 38.91992020538186 2 5.35253585235939 4.886668570995123 3 2.1378131190370757 2.9276172456242233 4 1.3670013088667954 2.4960439376053856 5 1.0268748549304256 2.3437475331070234 6 0.7978612088338018 2.185253906242792 7 0.6594583950355779 2.1072144972509834 8 0.5764072553043083 2.10495458323555 9 0.4974187823440164 2.0435628248137183 >10 2.194716051900217 15.506634804085836 >50 0.07114508959339783 2.280058586750643 >100 0.05043618968582775 4.099805723920884 >500 0.0033401450123064697 0.991217115222197 >1k 0.0030061305110758232 4.277282530891908 >5k 0.0 0.0 >10k+ 0.001336058004922588 12.830017934871899 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28151 4.220881450672168 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG 19872 2.979551567893053 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC 19406 2.9096808437264787 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC 16718 2.50664971376993 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGGTAGT 4634 0.6948088750813409 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTA 4570 0.6852128957966612 No Hit GAACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCT 4258 0.6384324967838475 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTC 3979 0.596600024589697 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT 3346 0.5016897919771616 No Hit GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 3286 0.4926935613977743 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGT 1750 0.26239005856546105 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTAT 1182 0.17722574241392858 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATG 1048 0.1571341607866304 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 821 0.12309842176128202 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTT 785 0.11770068341364968 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 766 0.1148518770635104 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA 686 0.10285690295766074 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10630545801309252 0.0 2 0.0 0.0 0.0 0.7456375778548788 0.0 3 0.0 0.0 0.0 0.8507435384573864 0.0 4 0.0 0.0 0.0 1.6725492018844104 0.0 5 0.0 0.0 0.0 4.803087506334846 0.0 6 0.0 0.0 0.0 5.0251444644693875 0.0 7 0.0 0.0 0.0 5.691465276049335 0.0 8 0.0 0.0 0.0 6.492429671967446 0.0 9 0.0 0.0 0.0 6.599035004333184 0.0 10 0.0 0.0 0.0 10.262000221907021 0.0 11 0.0 0.0 0.0 10.534136196933485 0.0 12 0.0 0.0 0.0 14.174310963706207 0.0 13 0.0 0.0 0.0 14.47043688694437 0.0 14 0.0 0.0 0.0 14.723380903401475 0.0 15 0.0 0.0 0.0 15.613707856408165 0.0 16 0.0 0.0 0.0 16.02138703883073 0.0 17 0.0 0.0 0.0 16.216605242403432 0.0 18 0.0 0.0 0.0 16.36114468037892 0.0 19 0.0 0.0 0.0 17.36782288221235 0.0 20 0.0 0.0 0.0 17.58718097117308 0.0 21 0.0 0.0 0.0 17.75840922653408 0.0 22 0.0 0.0 0.0 18.094118564321548 0.0 23 0.0 0.0 0.0 18.258599646748014 0.0 24 0.0 0.0 0.0 18.403438959076148 0.0 25 0.0 0.0 0.0 18.52998593589286 0.0 26 0.0 0.0 0.0 18.673475813634088 0.0 27 0.0 0.0 0.0 18.85954784945108 0.0 28 0.0 0.0 0.0 18.984145642975594 0.0 29 0.0 0.0 0.0 19.13633187694356 0.0 30 0.0 0.0 0.0 19.316706300060275 0.0 31 0.0 0.0 0.0 19.465743853325456 0.0 32 0.0 0.0 0.0 19.646718025147464 0.0 33 0.0 0.0 0.0 19.80610124357894 0.0 34 0.0 0.0 0.0 20.077937344252756 0.0 35 0.0 0.0 0.0 20.292647380747468 0.0 36 0.0 0.0 0.0 20.468373751398165 0.0 37 0.0 0.0 0.0 20.65654490768368 0.0 38 0.0 0.0 0.0 20.880251174757777 0.0 39 0.0 0.0 0.0 21.229005046885355 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 20 7.031155E-4 45.0 13 CTCGTAG 25 3.889038E-5 45.0 1 TCGTACA 20 7.031155E-4 45.0 34 TATCGTG 25 3.889038E-5 45.0 1 TGCACGG 35 1.2109012E-7 45.0 2 ACGAATG 20 7.031155E-4 45.0 21 CGTTTTT 22330 0.0 44.445812 1 GATACCT 2400 0.0 43.6875 5 CGATGAA 560 0.0 43.392857 19 TGATACC 2420 0.0 43.326447 4 TACGGCT 2265 0.0 42.81457 7 CCGATGA 545 0.0 42.522938 18 ACGGCTG 2280 0.0 42.43421 8 CACCGGT 150 0.0 42.0 16 ATACCTG 2540 0.0 41.45669 6 CGGCTGT 2360 0.0 41.28178 9 ATGATGC 120 0.0 41.250004 3 ATGATAC 8060 0.0 41.008068 3 GAATGAT 8370 0.0 40.94086 1 GATGAAT 630 0.0 40.714287 20 >>END_MODULE