##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933427.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 404432 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.086976302567553 31.0 25.0 31.0 16.0 33.0 2 27.982120603710882 31.0 27.0 33.0 16.0 34.0 3 28.08257754084741 31.0 27.0 33.0 16.0 34.0 4 31.645839102741622 35.0 28.0 37.0 19.0 37.0 5 33.70216748427424 35.0 33.0 37.0 30.0 37.0 6 32.150601337184 35.0 32.0 37.0 17.0 37.0 7 32.67293883767852 35.0 32.0 37.0 27.0 37.0 8 32.4916994698738 35.0 32.0 37.0 23.0 37.0 9 33.426227400403526 35.0 32.0 39.0 27.0 39.0 10 32.52414744629505 35.0 28.0 39.0 17.0 39.0 11 33.15279948174229 37.0 31.0 39.0 17.0 39.0 12 33.791500178027455 37.0 31.0 39.0 25.0 39.0 13 33.891932389128456 37.0 32.0 39.0 25.0 39.0 14 34.26300094947977 37.0 32.0 40.0 23.0 41.0 15 34.54147545199193 37.0 32.0 40.0 25.0 41.0 16 34.635290975986074 37.0 32.0 40.0 25.0 41.0 17 32.762803141195555 36.0 29.0 40.0 18.0 41.0 18 33.29954602998774 36.0 30.0 39.0 23.0 39.0 19 32.958368773984255 36.0 31.0 37.0 23.0 39.0 20 32.23217994619615 34.0 30.0 35.0 24.0 39.0 21 32.77824455038177 35.0 32.0 37.0 25.0 39.0 22 32.81043290343 34.0 30.0 37.0 25.0 39.0 23 33.74960438343158 35.0 32.0 38.0 27.0 39.0 24 32.260963524152395 35.0 31.0 37.0 21.0 39.0 25 31.602956739328242 35.0 30.0 37.0 19.0 39.0 26 30.33939698144558 33.0 25.0 36.0 18.0 39.0 27 32.37990564544843 34.0 31.0 37.0 22.0 39.0 28 32.26590873125767 35.0 31.0 37.0 21.0 39.0 29 32.321915674328444 35.0 31.0 38.0 21.0 40.0 30 31.590860762748743 35.0 30.0 37.0 19.0 40.0 31 31.81712129603988 35.0 30.0 37.0 21.0 39.0 32 31.554295901412353 35.0 30.0 37.0 18.0 39.0 33 31.177367270641295 35.0 30.0 38.0 15.0 40.0 34 30.143500019780827 35.0 25.0 37.0 10.0 40.0 35 29.484820686790364 35.0 24.0 37.0 8.0 40.0 36 28.8090754440796 34.0 22.0 37.0 7.0 40.0 37 28.839080488190845 35.0 21.0 38.0 7.0 40.0 38 28.744963306563278 34.0 21.0 38.0 7.0 40.0 39 28.15417177671401 33.0 20.0 37.0 7.0 39.0 40 27.96763856470309 33.0 20.0 37.0 7.0 39.0 41 27.263161668710687 33.0 18.0 37.0 7.0 39.0 42 27.73338163152273 33.0 18.0 37.0 7.0 39.0 43 27.78831546465166 33.0 18.0 37.0 7.0 40.0 44 27.82250415397397 33.0 18.0 37.0 7.0 40.0 45 28.12674318550461 34.0 18.0 38.0 7.0 40.0 46 27.784203524943624 33.0 18.0 37.0 7.0 40.0 47 27.800782331764054 33.0 18.0 37.0 7.0 40.0 48 27.649684001265975 33.0 18.0 37.0 7.0 40.0 49 27.548512481702733 33.0 18.0 37.0 7.0 39.0 50 27.596216422043756 33.0 18.0 37.0 7.0 40.0 51 25.91526387625114 31.0 15.0 35.0 7.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 4.0 10 17.0 11 24.0 12 30.0 13 53.0 14 91.0 15 153.0 16 406.0 17 722.0 18 1351.0 19 2213.0 20 3406.0 21 5073.0 22 6973.0 23 9934.0 24 13955.0 25 19348.0 26 24023.0 27 25253.0 28 24264.0 29 24419.0 30 26116.0 31 29355.0 32 33068.0 33 36337.0 34 38491.0 35 40104.0 36 24872.0 37 11903.0 38 2429.0 39 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.495183368279463 1.9402520077540848 26.599279977845473 44.96528464612098 2 45.25927720852949 17.08841041262808 26.54142105471377 11.110891324128655 3 10.224462950508368 16.970961743877833 61.74585591644578 11.058719389168019 4 9.856539541876014 2.379880919412905 74.7821636270127 12.981415911698383 5 21.035674724057444 2.7164022629267714 61.9649285912094 14.282994421806386 6 11.192981762076196 14.389316374569766 64.20312932705622 10.214572536297819 7 40.78510108003323 1.1875914863314474 55.09257427701072 2.9347331566245995 8 39.85367132175496 11.83932033073545 43.28762313565692 5.019385211852673 9 36.70481069747201 2.445157653202516 43.33237725995965 17.517654389365827 10 25.13648771610555 14.20139850456937 48.19376310479883 12.46835067452625 11 21.56431736361119 12.832070657119122 53.38425248249396 12.219359496775725 12 15.658503778138227 11.083445424694387 55.628881987577635 17.629168809589746 13 15.727489417256797 12.387991059065554 62.16842386359141 9.716095660086244 14 13.694762036634096 16.59166435890335 54.420520631404045 15.293052973058513 15 9.020305020374252 12.890671361316612 64.02534913162164 14.063674486687502 16 11.07231870870752 13.476431142936265 52.87440162994026 22.57684851841595 17 12.236173200933655 14.663528108557186 58.452595244688844 14.647703445820312 18 11.658325750682438 12.862483680816553 57.184149622186176 18.29504094631483 19 11.803962099932745 15.725511334414685 54.37279938283815 18.097727182814417 20 12.31381295248645 16.030136092099536 60.68535625271987 10.970694702694148 21 13.744461368042094 19.92646477034458 53.839211536179135 12.48986232543419 22 10.877230288404478 12.647119911381887 58.281985599556904 18.193664200656723 23 11.847727182814417 19.665110574830873 55.13238319420818 13.354779048146536 24 13.415110574830875 14.79012541045219 52.91965027495351 18.87511373976342 25 11.043141986786406 21.367003600110774 51.387872374095025 16.20198203900779 26 11.15094750168137 13.476183882581003 56.81993511888278 18.55293349685485 27 12.739595284250505 17.0290679273648 52.99852632828262 17.23281046010207 28 9.25198797325632 15.459211931795705 58.31215136289908 16.9766487320489 29 15.08436523321597 13.631957906397119 54.78621869683903 16.49745816354789 30 12.703000751671482 19.918057918265617 54.123808205087634 13.255133124975274 31 15.544516754361673 14.297335522411677 51.34262372908177 18.815523994144876 32 18.994293231000515 20.12724017881869 48.36931795703604 12.509148633144756 33 16.386191003679233 15.25052419195316 47.28013609209954 21.08314871226807 34 16.77018633540373 18.158553230209282 50.756863947462115 14.31439648692487 35 14.49366024449104 25.056869881710647 42.719913359971514 17.7295565138268 36 18.200340230248845 18.135805277525023 44.2163330300273 19.447521462198836 37 17.763678442853188 23.79089686276061 43.359575899038646 15.085848795347548 38 21.40310361197927 20.139603196581874 38.38890097717292 20.068392214265934 39 22.035101080033233 18.44166633698619 44.18320014242197 15.340032440558609 40 20.196473078292517 22.96801440044309 41.55853147129802 15.276981049966373 41 19.76104759267318 21.24238438105788 41.93041104561459 17.066156980654352 42 17.127477548759742 23.130958974561857 43.35215808838074 16.38940538829766 43 23.03032400996954 18.23767654389366 39.92908573011037 18.802913716026424 44 19.23487755667207 20.18633540372671 41.43292321082407 19.14586382877715 45 16.09837995015231 19.00270008307948 40.55935237567749 24.339567591090717 46 22.690093761126718 20.753303398346322 39.09829093642442 17.458311904102544 47 15.609298967440758 18.29355738418325 48.534240613996914 17.56290303437908 48 17.440756418878824 21.57519681924279 40.140493333860825 20.843553428017568 49 16.598587648850735 18.628100644855007 45.28771214938482 19.485599556909445 50 19.90618942121296 16.87304664319342 41.7778514064169 21.442912529176724 51 17.061459033904338 17.676890058155635 40.54105510938798 24.720595798552043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 55.0 1 401.0 2 747.0 3 25236.0 4 49725.0 5 32457.0 6 15189.0 7 14449.0 8 13709.0 9 13330.0 10 12951.0 11 12315.0 12 11679.0 13 10787.5 14 9896.0 15 9042.5 16 8189.0 17 7454.0 18 6719.0 19 6112.0 20 5505.0 21 5112.0 22 4719.0 23 4446.0 24 4173.0 25 4118.5 26 4173.5 27 4283.0 28 4307.5 29 4332.0 30 4468.5 31 4605.0 32 5002.0 33 5399.0 34 5668.5 35 5938.0 36 6159.5 37 6381.0 38 7048.0 39 7715.0 40 8259.5 41 8804.0 42 9895.0 43 10986.0 44 12745.5 45 14505.0 46 35062.5 47 55620.0 48 44021.5 49 32423.0 50 28958.5 51 25494.0 52 20634.5 53 15775.0 54 14014.0 55 12253.0 56 11152.0 57 10051.0 58 9368.5 59 8686.0 60 7607.0 61 6528.0 62 5829.0 63 5130.0 64 4524.5 65 3919.0 66 3367.0 67 2815.0 68 2388.5 69 1962.0 70 1647.0 71 1332.0 72 1116.0 73 900.0 74 749.0 75 480.0 76 362.0 77 253.5 78 145.0 79 122.0 80 99.0 81 69.5 82 40.0 83 27.0 84 14.0 85 9.5 86 5.0 87 6.5 88 8.0 89 5.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 404432.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.60646380118557 #Duplication Level Percentage of deduplicated Percentage of total 1 83.22334987796404 38.787460435007326 2 6.887934318102061 6.42044522923135 3 3.028316632096737 4.234173884770343 4 1.9048041574971906 3.5510474405896235 5 1.2932199831133466 3.0136205164971 6 0.9109013894438054 2.547233558013741 7 0.6273548848455356 2.0467154911735275 8 0.48944785006351366 1.8249146805242602 9 0.3321176663656139 1.393094699568289 >10 1.1788405689316626 8.77632288904194 >50 0.06590806083989895 2.122774907035172 >100 0.04754024060582873 4.299431184027112 >500 0.004862070061959756 1.4840037127345866 >1k 0.0032413800413065045 3.374131956965761 >5k 5.402300068844173E-4 1.7123700797943544 >10k+ 0.0016206900206532523 14.41225933502553 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35431 8.76068164734739 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG 10998 2.7193693871899356 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC 10812 2.6733789611108913 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC 6801 1.681617676148277 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGGTAGT 2962 0.7323851722910155 No Hit GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 2775 0.6861474858567077 No Hit GAACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCT 2477 0.6124638999881314 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTA 2248 0.5558412786327491 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTC 1751 0.4329528820667009 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT 1188 0.29374530205325 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTACGGTAGTCGTATGCCG 911 0.22525418364521105 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGT 864 0.21363294694781818 No Hit CTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGCT 834 0.20621513628990784 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCC 705 0.17431855046089328 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTAT 535 0.13228429006606796 No Hit CCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 522 0.12906990544764013 No Hit GAATCTTTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC 518 0.12808086402658542 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATG 503 0.12437195869763025 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 502 0.12412469834236657 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC 473 0.1169541480397199 No Hit TCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 471 0.11645962732919254 No Hit GAATCTGTCTCTTATCCACATCTGACGCTACGGTAGTCGTATGCCGTCTTC 451 0.11151442022391898 No Hit GAATGACTCTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT 449 0.11101989951339163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25888159196107136 0.0 2 0.0 0.0 0.0 1.3574593503975947 0.0 3 0.0 0.0 0.0 1.6128792973849744 0.0 4 0.0 0.0 0.0 2.716896783637299 0.0 5 0.0 0.0 0.0 5.123976342129208 0.0 6 0.0 0.0 0.0 5.492888792182616 0.0 7 0.0 0.0 0.0 6.0873026862365 0.0 8 0.0 0.0 0.0 6.915377616014559 0.0 9 0.0 0.0 0.0 7.136181113265024 0.0 10 0.0 0.0 0.0 10.738764489456818 0.0 11 0.0 0.0 0.0 11.6449736914982 0.0 12 0.0 0.0 0.0 15.490366736558927 0.0 13 0.0 0.0 0.0 15.894390157059778 0.0 14 0.0 0.0 0.0 16.143628595165566 0.0 15 0.0 0.0 0.0 17.00211654864106 0.0 16 0.0 0.0 0.0 17.497873560944733 0.0 17 0.0 0.0 0.0 17.902638762511373 0.0 18 0.0 0.0 0.0 18.267100526170037 0.0 19 0.0 0.0 0.0 19.479170787672587 0.0 20 0.0 0.0 0.0 19.92423942714721 0.0 21 0.0 0.0 0.0 20.373016971950786 0.0 22 0.0 0.0 0.0 21.06040075958381 0.0 23 0.0 0.0 0.0 21.481237884242592 0.0 24 0.0 0.0 0.0 21.795505795782727 0.0 25 0.0 0.0 0.0 22.079855204335956 0.0 26 0.0 0.0 0.0 22.33206076670491 0.0 27 0.0 0.0 0.0 22.60478893856075 0.0 28 0.0 0.0 0.0 22.848834909205998 0.0 29 0.0 0.0 0.0 23.128239110653954 0.0 30 0.0 0.0 0.0 23.44374332397041 0.0 31 0.0 0.0 0.0 23.70188313486569 0.0 32 0.0 0.0 0.0 23.976836649918898 0.0 33 0.0 0.0 0.0 24.24659769751157 0.0 34 0.0 0.0 0.0 24.561360129762235 0.0 35 0.0 0.0 0.0 24.8842821537366 0.0 36 0.0 0.0 0.0 25.148108952802943 0.0 37 0.0 0.0 0.0 25.397594651263994 0.0 38 0.0 0.0 0.0 25.692823515448826 0.0 39 0.0 0.0 0.0 26.20391066977885 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCTACG 20 7.027857E-4 45.000004 1 GGAATAG 20 7.027857E-4 45.000004 8 GGGCAAC 20 7.027857E-4 45.000004 7 GGCGCGA 20 7.027857E-4 45.000004 8 TTGCACG 20 7.027857E-4 45.000004 1 GGACATA 20 7.027857E-4 45.000004 8 CACCGGT 80 0.0 45.000004 16 CCGTTTG 20 7.027857E-4 45.000004 1 TACCGTA 20 7.027857E-4 45.000004 43 TCGCTTG 25 3.8863072E-5 45.0 1 CGGGCTA 25 3.8863072E-5 45.0 6 GCGATGC 25 3.8863072E-5 45.0 9 TGTTTAG 30 2.1619999E-6 44.999996 1 GACACGA 60 0.0 44.999996 25 CGACCAA 65 0.0 44.999996 29 CACGACC 60 0.0 44.999996 27 CGAGACA 65 0.0 44.999996 22 CACGTGA 60 0.0 44.999996 43 TCAAGCG 65 0.0 44.999996 17 AATCGTT 30 2.1619999E-6 44.999996 22 >>END_MODULE