##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933425.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 350486 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.177690407034802 31.0 26.0 31.0 16.0 33.0 2 28.238035185428235 31.0 28.0 33.0 16.0 34.0 3 28.41083524020931 31.0 28.0 33.0 16.0 34.0 4 31.724317091124895 35.0 28.0 37.0 19.0 37.0 5 33.61267497132553 35.0 33.0 37.0 28.0 37.0 6 32.28863635066736 35.0 32.0 37.0 17.0 37.0 7 32.250828849083845 35.0 32.0 35.0 26.0 37.0 8 32.599832803592726 35.0 32.0 35.0 25.0 37.0 9 33.04650685048761 35.0 32.0 37.0 25.0 39.0 10 31.86035961493469 35.0 28.0 39.0 15.0 39.0 11 32.473456857049925 35.0 29.0 39.0 17.0 39.0 12 33.27708096757075 35.0 31.0 39.0 23.0 39.0 13 33.294941880702794 35.0 31.0 39.0 23.0 39.0 14 33.53838099096683 36.0 31.0 40.0 20.0 41.0 15 34.06843069338005 37.0 32.0 40.0 24.0 41.0 16 34.252244026865554 37.0 32.0 40.0 25.0 41.0 17 32.311764235946654 35.0 27.0 39.0 18.0 41.0 18 32.96660066307927 36.0 30.0 39.0 23.0 39.0 19 32.740720028760066 36.0 30.0 37.0 21.0 39.0 20 32.20767733946577 34.0 30.0 36.0 23.0 39.0 21 32.65002025758518 35.0 31.0 37.0 24.0 39.0 22 32.894483659832346 34.0 30.0 37.0 25.0 39.0 23 33.879184903248635 35.0 32.0 38.0 27.0 40.0 24 32.26756560889736 35.0 31.0 37.0 21.0 39.0 25 31.524939655221605 35.0 30.0 37.0 18.0 39.0 26 30.62889245219495 33.0 25.0 37.0 19.0 39.0 27 32.43178900155784 34.0 30.0 37.0 22.0 39.0 28 32.38139326535154 35.0 31.0 37.0 21.0 39.0 29 32.598531753051475 35.0 31.0 38.0 22.0 40.0 30 31.639725980495655 35.0 30.0 37.0 18.0 40.0 31 31.88218644967274 35.0 30.0 37.0 20.0 40.0 32 31.694726750854528 35.0 30.0 37.0 18.0 40.0 33 31.5046107405146 35.0 30.0 38.0 15.0 40.0 34 30.74032914296149 35.0 29.0 38.0 10.0 40.0 35 30.230927911528564 35.0 27.0 38.0 9.0 40.0 36 29.517980746734533 34.0 24.0 38.0 8.0 40.0 37 29.680049987731323 35.0 24.0 38.0 7.0 40.0 38 29.48053274595847 35.0 23.0 38.0 8.0 40.0 39 29.109239741387672 34.0 23.0 38.0 7.0 40.0 40 28.732448657007698 34.0 22.0 37.0 7.0 40.0 41 28.306831085977755 33.0 21.0 37.0 7.0 40.0 42 28.81312805647016 34.0 22.0 38.0 7.0 40.0 43 28.802006356887293 34.0 22.0 38.0 7.0 40.0 44 28.87950160634091 34.0 21.0 38.0 7.0 40.0 45 29.058247690349972 35.0 22.0 38.0 7.0 40.0 46 28.756212801652563 34.0 21.0 38.0 7.0 40.0 47 28.81106805977985 34.0 22.0 38.0 7.0 40.0 48 28.628581455464698 34.0 22.0 37.0 7.0 40.0 49 28.49064156628225 34.0 20.0 37.0 7.0 40.0 50 28.582847817031208 34.0 20.0 38.0 7.0 40.0 51 26.873649732086303 31.0 18.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 15.0 10 20.0 11 15.0 12 26.0 13 33.0 14 76.0 15 161.0 16 371.0 17 673.0 18 1211.0 19 1885.0 20 2913.0 21 4183.0 22 5837.0 23 7953.0 24 10938.0 25 15050.0 26 18788.0 27 20229.0 28 19907.0 29 20572.0 30 22757.0 31 25590.0 32 29333.0 33 31905.0 34 34714.0 35 35963.0 36 24415.0 37 12357.0 38 2545.0 39 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.465251108460823 2.4274864045924804 30.90565671667342 40.20160577027328 2 41.44302482838116 15.029416296228664 30.62775688615237 12.899801989237803 3 12.171099558898216 14.904446967924539 60.08028851366388 12.844164959513362 4 11.254087181798987 2.695970737775546 70.656174569027 15.393767511398456 5 20.290967399553764 3.232654086040527 59.982139086867946 16.494239427537764 6 12.97912042135777 13.03703999589142 62.71177736057931 11.272062222171499 7 48.20620509806383 1.4049063300673923 47.45410658342987 2.9347819884389104 8 47.96111684917514 10.194415754124272 37.21860502273985 4.625862373960729 9 44.22116717928819 2.7310648642171156 37.49393699035054 15.553830966144155 10 27.18796185867624 16.08338136188036 42.901000325262636 13.827656454180767 11 22.82059768435829 14.443943552666868 49.490707189445516 13.244751573529328 12 18.063774301969264 13.282128244780106 51.541003064316406 17.113094388934222 13 17.31795278556062 14.439093144947302 57.20257014545517 11.04038392403691 14 14.332384175116838 18.007851954143675 51.013449895288254 16.64631397545123 15 11.041810514542663 14.642524951067944 59.4120735207683 14.903591013621087 16 13.886146664916716 14.746095421785748 49.36431127063563 22.003446642661903 17 14.316121043351233 15.820603390720315 54.094029433415315 15.76924613251314 18 14.024240625873787 14.424256603687452 53.11167921115252 18.439823559286246 19 14.627117773605795 17.069726037559274 49.60597570231051 18.697180486524427 20 15.321582031807262 17.390423583252968 55.11404164503004 12.173952739909726 21 15.994076796220105 20.846196424393558 49.71896167036629 13.440765109020047 22 13.476715189765068 14.389447795347031 53.07401722180059 19.059819793087314 23 14.017678309547316 20.506097247821597 51.06109801818047 14.41512642445062 24 15.218582197291761 16.192658194621185 49.57972643700462 19.00903317108244 25 13.460452057999465 21.725832130242008 47.59277118058924 17.220944631169292 26 13.173422048241584 15.308172081053167 52.32819570539194 19.190210165313307 27 14.190010442642503 17.44948443019122 49.30068533407896 19.059819793087314 28 10.906284416495952 17.100255074382428 54.753114247074066 17.240346262047556 29 16.222616595242034 14.74894860279726 50.663364585176005 18.365070216784694 30 13.863891853026939 18.98820494969842 51.226582516848026 15.921320680426607 31 16.886551816620347 15.561819872976383 49.07214553505703 18.479482775346234 32 19.515187482524265 19.863560884029603 46.56106092682732 14.060190706618808 33 15.734722642273871 18.289746238080838 43.712445004936 22.263086114709292 34 17.216664859652024 18.39131948209058 47.36765519878112 17.02436045947627 35 15.009158711046947 20.461872942143195 43.090166226325735 21.438802120484127 36 18.125117693716724 19.9788293968946 44.77154579640842 17.12450711298026 37 18.86780071101271 20.44618044657989 41.22846561631563 19.45755322609177 38 18.423845745621794 23.715069931466594 40.9999258172937 16.86115850561791 39 21.298710932819002 20.177981431497976 38.60810417534509 19.91520346033793 40 17.24434071546367 22.325285460760202 42.735801144696225 17.694572679079908 41 19.853004114287018 20.96745661738272 37.826617896292575 21.352921372037684 42 17.55819062672974 19.63102663159156 45.05229880794097 17.758483933737722 43 21.302990704336263 19.43387182369624 38.731646913143464 20.531490558824032 44 19.609342455904088 19.582237236294745 38.886574642068446 21.921845665732725 45 16.560147908903637 19.178226805064966 40.518023544449704 23.743601741581692 46 22.053377310363324 21.461627568576205 37.57553796727972 18.90945715378075 47 14.815142402264284 20.124626946582744 45.93221983189058 19.128010819262396 48 18.249231067717396 21.62140570522075 38.02320206798559 22.106161159076255 49 17.006385419103758 18.53369321456492 44.026294916202076 20.43362645012925 50 19.05325747676084 18.57820283834447 40.03726254401032 22.331277140884374 51 17.887447715457963 18.640972820597685 38.582140228140354 24.889439235803998 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 380.0 2 660.0 3 18421.5 4 36183.0 5 23947.5 6 11712.0 7 10995.0 8 10278.0 9 10010.5 10 9743.0 11 9058.5 12 8374.0 13 7730.5 14 7087.0 15 6486.5 16 5886.0 17 5413.5 18 4941.0 19 4526.0 20 4111.0 21 3906.0 22 3701.0 23 3481.0 24 3261.0 25 3133.5 26 3232.5 27 3459.0 28 3624.5 29 3790.0 30 4146.0 31 4502.0 32 4913.5 33 5325.0 34 5804.5 35 6284.0 36 6716.0 37 7148.0 38 7547.0 39 7946.0 40 8652.0 41 9358.0 42 10471.0 43 11584.0 44 12512.5 45 13441.0 46 28887.0 47 44333.0 48 36039.0 49 27745.0 50 25146.0 51 22547.0 52 19244.5 53 15942.0 54 14347.5 55 12753.0 56 11677.5 57 10602.0 58 9822.5 59 9043.0 60 8065.5 61 7088.0 62 6468.0 63 5848.0 64 5108.5 65 4369.0 66 3625.5 67 2882.0 68 2370.5 69 1859.0 70 1607.0 71 1355.0 72 1148.0 73 941.0 74 779.0 75 471.0 76 325.0 77 251.0 78 177.0 79 141.5 80 106.0 81 75.5 82 45.0 83 32.0 84 19.0 85 13.0 86 7.0 87 4.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 350486.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.183018014938845 #Duplication Level Percentage of deduplicated Percentage of total 1 81.80198649787219 36.96060629591143 2 6.701571978514837 6.055944948672904 3 2.902568094968667 3.9344035957366805 4 1.8921895171875807 3.419793321710595 5 1.3839756548313211 3.1266098472240182 6 1.084751335899538 2.9407403491006687 7 0.8391795113997369 2.6541664086939325 8 0.6753478767974114 2.4411404226950513 9 0.5476944696641075 2.227184018056417 >10 2.049930299666158 13.813539089583953 >50 0.07004105951400892 2.1635866434650266 >100 0.04241018282499623 3.771759807468352 >500 0.002570314110605832 0.753132548731653 >1k 0.00321289263825729 2.411243568703307 >5k 0.0019277355829543739 6.148453347914502 >10k+ 6.42578527651458E-4 7.1776957863315065 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24722 7.05363409665436 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCG 8793 2.5088020634205077 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGC 7103 2.0266144724753627 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 5281 1.5067648921782897 No Hit GAACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCT 1975 0.5635032497731721 No Hit GCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 1788 0.5101487648579401 TruSeq Adapter, Index 19 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTGACTGT 1757 0.50130390372226 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTA 1410 0.4022985226228722 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTC 1375 0.39231238908258814 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCT 832 0.23738466015760973 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTCTGACTGTCGTATGCCG 696 0.19858139840107739 No Hit CTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGCT 544 0.15521304702612945 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCTGACTGTCGT 522 0.14893604880080802 No Hit GAATCTTTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 461 0.13153164463059866 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 400 0.1141272404603893 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTT 376 0.10727960603276593 No Hit GAATGACTCTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCT 369 0.10528237932470912 No Hit TCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 354 0.10100260780744452 TruSeq Adapter, Index 19 (95% over 22bp) GAATGATACGGCTGCCTCCTATACACATCTGACGCTCTGACTGTCGTATGC 353 0.10071728970629354 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18517144764698162 0.0 2 0.0 0.0 0.0 1.0394138424929955 0.0 3 0.0 0.0 0.0 1.2428456486136394 0.0 4 0.0 0.0 0.0 2.240603048338593 0.0 5 0.0 0.0 0.0 4.305735464469337 0.0 6 0.0 0.0 0.0 4.662097772806902 0.0 7 0.0 0.0 0.0 5.159121905011898 0.0 8 0.0 0.0 0.0 5.894957287880258 0.0 9 0.0 0.0 0.0 6.067574739076597 0.0 10 0.0 0.0 0.0 9.444314466198364 0.0 11 0.0 0.0 0.0 10.1878534377978 0.0 12 0.0 0.0 0.0 13.130053696866637 0.0 13 0.0 0.0 0.0 13.460452057999463 0.0 14 0.0 0.0 0.0 13.637634598814218 0.0 15 0.0 0.0 0.0 14.267902284256717 0.0 16 0.0 0.0 0.0 14.642239632966795 0.0 17 0.0 0.0 0.0 15.013723800665362 0.0 18 0.0 0.0 0.0 15.337274527370566 0.0 19 0.0 0.0 0.0 16.216054278915564 0.0 20 0.0 0.0 0.0 16.588679719018735 0.0 21 0.0 0.0 0.0 16.98898101493355 0.0 22 0.0 0.0 0.0 17.592428798867857 0.0 23 0.0 0.0 0.0 17.95050301581233 0.0 24 0.0 0.0 0.0 18.239815570379417 0.0 25 0.0 0.0 0.0 18.488898272684217 0.0 26 0.0 0.0 0.0 18.725712296639525 0.0 27 0.0 0.0 0.0 18.992199403114533 0.0 28 0.0 0.0 0.0 19.204761388472008 0.0 29 0.0 0.0 0.0 19.47267508545277 0.0 30 0.0 0.0 0.0 19.75656659609799 0.0 31 0.0 0.0 0.0 20.000513572582072 0.0 32 0.0 0.0 0.0 20.236186324132774 0.0 33 0.0 0.0 0.0 20.48327179972952 0.0 34 0.0 0.0 0.0 20.749758906204526 0.0 35 0.0 0.0 0.0 21.04706036760384 0.0 36 0.0 0.0 0.0 21.284730345862602 0.0 37 0.0 0.0 0.0 21.525538823234022 0.0 38 0.0 0.0 0.0 21.836820871589737 0.0 39 0.0 0.0 0.0 22.375216128461624 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACCG 75 0.0 45.000004 11 ACCGCTG 20 7.026568E-4 45.000004 17 CTCCCGA 20 7.026568E-4 45.000004 44 ACGGGAG 30 2.1611686E-6 45.000004 5 TCCCGAG 20 7.026568E-4 45.000004 45 CACCGCT 20 7.026568E-4 45.000004 16 TATCGCG 20 7.026568E-4 45.000004 1 ATCGCGG 20 7.026568E-4 45.000004 2 TAACCGC 25 3.885239E-5 45.0 22 GTAACCG 25 3.885239E-5 45.0 21 CCGATGA 105 0.0 44.999996 18 CGTTTTT 10780 0.0 44.45733 1 TGATACC 1025 0.0 43.02439 4 ACGGCGA 1145 0.0 42.44541 8 GATACCT 1035 0.0 42.391304 5 CACCGGT 85 0.0 42.35294 16 CTACGGC 80 0.0 42.187504 6 GAATGAT 3205 0.0 42.05148 1 TACGGCT 835 0.0 42.035927 7 ATACGGC 2005 0.0 41.857853 6 >>END_MODULE