##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933424.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1024875 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.418242224661544 31.0 28.0 33.0 25.0 34.0 2 28.573576289791436 31.0 27.0 33.0 16.0 34.0 3 28.53828905964142 31.0 27.0 33.0 16.0 34.0 4 33.179136967922915 35.0 32.0 37.0 28.0 37.0 5 34.289923161361145 35.0 33.0 37.0 30.0 37.0 6 33.720653738260765 35.0 33.0 37.0 28.0 37.0 7 33.85141114770094 35.0 33.0 37.0 30.0 37.0 8 33.610532016099526 35.0 33.0 37.0 28.0 37.0 9 34.922111477009395 37.0 34.0 39.0 28.0 39.0 10 34.85132040492743 37.0 33.0 39.0 28.0 39.0 11 35.31265081107452 37.0 34.0 39.0 30.0 39.0 12 35.45538821807538 37.0 34.0 39.0 30.0 39.0 13 35.645602634467615 37.0 34.0 39.0 30.0 39.0 14 36.46097231369679 38.0 35.0 40.0 30.0 41.0 15 36.71938236370289 38.0 35.0 41.0 30.0 41.0 16 36.64788096109282 38.0 34.0 41.0 31.0 41.0 17 35.88199829247469 38.0 34.0 40.0 27.0 41.0 18 35.58972264910355 38.0 34.0 39.0 28.0 40.0 19 34.90685498231492 37.0 34.0 38.0 27.0 40.0 20 33.865324063910236 35.0 33.0 37.0 27.0 40.0 21 34.26253152823515 35.0 33.0 38.0 28.0 40.0 22 34.662088547383824 35.0 33.0 38.0 29.0 40.0 23 34.93371289181608 35.0 33.0 39.0 30.0 40.0 24 34.36290572020978 35.0 33.0 38.0 27.0 40.0 25 33.42678570557385 35.0 33.0 38.0 24.0 40.0 26 33.32146066593487 35.0 32.0 38.0 24.0 40.0 27 34.15557019148677 35.0 33.0 38.0 25.0 40.0 28 33.80405025003049 35.0 33.0 38.0 24.0 40.0 29 33.734862300280525 35.0 33.0 39.0 23.0 40.0 30 32.95102134406635 35.0 32.0 38.0 21.0 40.0 31 32.80519770703744 35.0 33.0 38.0 20.0 40.0 32 31.839516038541287 35.0 31.0 38.0 15.0 40.0 33 30.755331137943653 35.0 25.0 39.0 9.0 40.0 34 29.7385788510794 35.0 21.0 39.0 7.0 40.0 35 29.13628588852299 35.0 18.0 39.0 7.0 40.0 36 28.30905915355531 35.0 15.0 39.0 7.0 40.0 37 28.315304793267472 35.0 15.0 39.0 7.0 40.0 38 28.15563166239785 35.0 15.0 39.0 7.0 40.0 39 27.750635931211125 35.0 15.0 39.0 7.0 40.0 40 27.600495670203685 34.0 15.0 39.0 7.0 40.0 41 27.049510428100987 33.0 12.0 38.0 7.0 40.0 42 27.35926917916819 34.0 12.0 39.0 7.0 40.0 43 27.194455909257226 34.0 12.0 38.0 7.0 40.0 44 27.361909501158678 34.0 11.0 39.0 7.0 40.0 45 27.555423832174654 35.0 10.0 39.0 7.0 40.0 46 27.29825588486401 34.0 10.0 39.0 7.0 40.0 47 27.212907915599462 34.0 10.0 39.0 7.0 40.0 48 26.982753994389558 34.0 10.0 38.0 7.0 40.0 49 27.16955140870838 34.0 10.0 39.0 7.0 40.0 50 27.062098304671302 34.0 10.0 39.0 7.0 40.0 51 25.88242761312355 31.0 10.0 37.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 29.0 10 45.0 11 48.0 12 86.0 13 133.0 14 174.0 15 297.0 16 576.0 17 1245.0 18 2621.0 19 4836.0 20 8173.0 21 12307.0 22 18296.0 23 27035.0 24 39652.0 25 57026.0 26 69529.0 27 63747.0 28 51186.0 29 42277.0 30 41068.0 31 44598.0 32 50994.0 33 59205.0 34 69650.0 35 82646.0 36 91877.0 37 97426.0 38 77005.0 39 11076.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.690645200634222 2.1523600439077937 28.584656665447007 43.57233809001097 2 43.42412489327967 16.85912916209294 27.886815465300646 11.829930479326748 3 9.60126844737163 17.04256616660568 61.091059885351875 12.265105500670813 4 8.556555677521649 2.198316867910721 75.82573484571289 13.419392608854738 5 19.13257714355409 2.8511769728015612 63.207415538480305 14.808830345164045 6 10.692328332723502 13.73650445176241 66.70579338943774 8.86537382607635 7 45.72899134040737 0.7865349432857666 51.322161239175514 2.1623124771313575 8 44.414782290523235 10.070106110501282 42.3808757165508 3.134235882424686 9 41.7238199780461 2.1046469081595314 41.107939992682034 15.063593121112332 10 24.667496036101962 11.740651298938895 50.595731186730085 12.996121478229053 11 19.744651786803267 14.978997438712039 51.593413830954994 13.6829369435297 12 13.257909501158677 12.771118429076717 56.74106598365655 17.229906086108063 13 14.099865837297232 13.930186608122941 61.87417977802171 10.095767776558116 14 13.29488962068545 19.730015855592146 53.29088913282107 13.68420539090133 15 10.16845956824003 14.878107086230028 62.15294548115624 12.800487864373705 16 10.930698865715332 16.335162824734724 52.841468471764856 19.892669837785096 17 11.824856689840225 17.167752164898157 56.848688864495664 14.158702280765947 18 12.055226247103306 16.366483717526528 54.999390169532866 16.578899865837297 19 12.414391999024271 18.20397609464569 52.264910354921334 17.11672155140871 20 14.302134406634956 16.869667032564948 57.71923405293329 11.108964507866812 21 14.053713867544824 20.663397975362848 53.87798512013661 11.404903036955726 22 12.554116355653127 13.44115135992194 55.935504329796316 18.069227954628612 23 13.167166727649713 19.763190633004022 54.683644346871574 12.385998292474692 24 14.90825710452494 16.09474326137334 52.18402244176119 16.81297719234053 25 11.352603976094645 24.16616660568362 50.81341627027687 13.667813147944871 26 12.27076472740578 15.04817660690328 55.73382119770704 16.9472374679839 27 15.70454933528479 17.290498841322112 50.89479204781071 16.11015977558239 28 11.44324917672887 16.692864983534577 56.050933040614716 15.812952799121843 29 14.748335162824736 13.969020612269789 55.12535675082327 16.157287474082203 30 11.844273691913648 18.516209293816317 52.49869496280034 17.14082205146969 31 14.600219538968167 14.77282595438468 49.5452616172704 21.08169288937675 32 15.465007927796073 18.487230150018295 51.61868520551287 14.429076716672764 33 14.324283449201122 16.23505305525064 47.711184290767164 21.72947920478107 34 20.33584583485791 18.37043541895353 45.151750213440664 16.141968532747896 35 17.792901573362606 19.37202097816807 41.1731186730089 21.66195877546042 36 16.54484693255275 19.111794121234297 43.448615684839616 20.89474326137334 37 16.426881326991097 21.33177216733748 43.287230150018296 18.954116355653127 38 17.979168191242834 21.728601048908402 39.39904866447127 20.893182095377487 39 22.106988657153313 21.02334431028174 40.11337968044884 16.75628735211611 40 20.31564824978656 21.78519331625808 40.94099280400049 16.958165629954873 41 19.960190267105745 24.21348944993292 38.431418465666546 17.39490181729479 42 19.821831930723256 22.48742529576778 40.33428466886206 17.356458104646908 43 19.79353579704842 21.113599219417 39.340992804000486 19.75187217953409 44 19.843005244542017 22.149042566166603 35.71333089401146 22.294621295279914 45 17.66069032808879 21.474423710208562 36.23505305525064 24.629832906452005 46 22.361165995853153 23.3376753262593 35.61605073789487 18.685107939992683 47 16.428052201487986 20.85337236248323 43.45310403707769 19.265471398951092 48 20.071716062934506 23.081644102939382 33.88335162824735 22.963288205878765 49 17.81144041956336 21.095548237589952 40.184705451884376 20.90830589096231 50 18.690084156604463 20.28344920112209 38.64461519697524 22.381851445298206 51 18.39746310525674 20.63285766556897 35.52257592389316 25.447103305281132 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 60.0 1 1176.5 2 2293.0 3 30012.5 4 57732.0 5 45610.0 6 33488.0 7 32700.5 8 31913.0 9 32157.5 10 32402.0 11 32059.5 12 31717.0 13 30951.5 14 30186.0 15 29090.0 16 27994.0 17 26860.0 18 25726.0 19 24308.5 20 22891.0 21 21589.0 22 20287.0 23 19139.5 24 17992.0 25 17087.0 26 15722.0 27 15262.0 28 15390.0 29 15518.0 30 15858.0 31 16198.0 32 17280.0 33 18362.0 34 19681.5 35 21001.0 36 22819.0 37 24637.0 38 25650.5 39 26664.0 40 29534.0 41 32404.0 42 34044.5 43 35685.0 44 39913.0 45 44141.0 46 100998.0 47 157855.0 48 110269.0 49 62683.0 50 57071.5 51 51460.0 52 44242.0 53 37024.0 54 33902.5 55 30781.0 56 27812.5 57 24844.0 58 22198.0 59 19552.0 60 17093.0 61 14634.0 62 12224.5 63 9815.0 64 8056.5 65 6298.0 66 4997.0 67 3696.0 68 2995.5 69 2295.0 70 1782.5 71 1270.0 72 1068.0 73 866.0 74 674.5 75 384.5 76 286.0 77 219.0 78 152.0 79 118.5 80 85.0 81 61.0 82 37.0 83 25.0 84 13.0 85 9.5 86 6.0 87 4.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1024875.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.46389469309547 #Duplication Level Percentage of deduplicated Percentage of total 1 83.32540796904279 42.04924613008993 2 6.087173675360651 6.143649826639655 3 3.0531621237641433 4.622233556837442 4 1.9871215336130912 4.011115672585336 5 1.413013328444698 3.565307790328678 6 1.0308120563164853 3.121127463499698 7 0.7736626086566276 2.732941988786351 8 0.5469372472957009 2.208046692100941 9 0.41787054730761986 1.8978637765210102 >10 1.2843857807938843 9.445002407911474 >50 0.04445703893295635 1.5761703969826026 >100 0.030881891868758747 3.145924962750235 >500 0.002360399355050776 0.8111727719560125 >1k 0.001180199677525388 1.5563360121755163 >5k 7.867997850169253E-4 2.372670431725963 >10k+ 7.867997850169253E-4 10.741190119109167 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTC 30731 2.9985120136602026 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28376 2.7687278936455666 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCG 26383 2.5742651542871084 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGC 22720 2.2168557141114773 No Hit GAACTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCT 7672 0.7485790950115868 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTC 5687 0.554896938651055 No Hit GCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 5403 0.5271862422246616 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCTTGGTT 5141 0.5016221490425662 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCT 4706 0.4591779485303086 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTA 3951 0.3855104281009879 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTT 3069 0.2994511525795829 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGT 1778 0.17348457128918163 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTAT 1155 0.11269667032564948 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.757287474082205E-5 0.0 0.0 0.06469081595316502 0.0 2 9.757287474082205E-5 0.0 0.0 0.6729601170874497 0.0 3 9.757287474082205E-5 0.0 0.0 0.7793145505549457 0.0 4 9.757287474082205E-5 0.0 0.0 1.6887913160141481 0.0 5 9.757287474082205E-5 0.0 0.0 5.280546408098549 0.0 6 9.757287474082205E-5 0.0 0.0 5.719819490181729 0.0 7 9.757287474082205E-5 0.0 0.0 6.336089767044761 0.0 8 9.757287474082205E-5 0.0 0.0 7.0712038053421145 0.0 9 9.757287474082205E-5 0.0 0.0 7.1965849493840715 0.0 10 9.757287474082205E-5 0.0 0.0 10.268862056348334 0.0 11 9.757287474082205E-5 0.0 0.0 10.4473228442493 0.0 12 9.757287474082205E-5 0.0 0.0 13.180729357238688 0.0 13 9.757287474082205E-5 0.0 0.0 13.388364434687157 0.0 14 9.757287474082205E-5 0.0 0.0 13.569362117331382 0.0 15 9.757287474082205E-5 0.0 0.0 14.082693011342847 0.0 16 9.757287474082205E-5 0.0 0.0 14.358726673984632 0.0 17 9.757287474082205E-5 0.0 0.0 14.508598609586535 0.0 18 9.757287474082205E-5 0.0 0.0 14.626954506647152 0.0 19 9.757287474082205E-5 0.0 0.0 15.358165629954872 0.0 20 9.757287474082205E-5 0.0 0.0 15.50628125381144 0.0 21 9.757287474082205E-5 0.0 0.0 15.626393462617392 0.0 22 9.757287474082205E-5 0.0 0.0 15.877643615075009 0.0 23 9.757287474082205E-5 0.0 0.0 16.007220392730822 0.0 24 9.757287474082205E-5 0.0 0.0 16.121380656177582 0.0 25 9.757287474082205E-5 0.0 0.0 16.21622149042566 0.0 26 9.757287474082205E-5 0.0 0.0 16.346871569703623 0.0 27 3.902914989632882E-4 0.0 0.0 16.51616050737895 0.0 28 4.8786437370411026E-4 0.0 0.0 16.61734357848518 0.0 29 4.8786437370411026E-4 0.0 0.0 16.735016465422614 0.0 30 4.8786437370411026E-4 0.0 0.0 16.862056348335162 9.757287474082205E-5 31 4.8786437370411026E-4 0.0 0.0 16.991535553116233 9.757287474082205E-5 32 4.8786437370411026E-4 0.0 0.0 17.13584583485791 9.757287474082205E-5 33 4.8786437370411026E-4 0.0 0.0 17.26864251738017 9.757287474082205E-5 34 4.8786437370411026E-4 0.0 0.0 17.43715087205757 9.757287474082205E-5 35 4.8786437370411026E-4 0.0 0.0 17.578436394682278 9.757287474082205E-5 36 4.8786437370411026E-4 0.0 0.0 17.7238199780461 9.757287474082205E-5 37 4.8786437370411026E-4 0.0 0.0 17.87886327600927 9.757287474082205E-5 38 4.8786437370411026E-4 0.0 0.0 18.034004146847177 9.757287474082205E-5 39 4.8786437370411026E-4 0.0 0.0 18.20992804000488 9.757287474082205E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAC 25 3.8905095E-5 45.0 3 CGTTTTT 33680 0.0 44.525684 1 GATACCT 3200 0.0 42.75 5 TACGGCT 2815 0.0 42.5222 7 ACGGCTG 2830 0.0 42.217316 8 TGATACC 3235 0.0 42.148376 4 CGGCTGT 2865 0.0 42.09424 9 CCGATGA 850 0.0 42.088238 18 CGATGAA 855 0.0 41.842106 19 ATACCTG 3305 0.0 41.732224 6 GAATCTG 3650 0.0 41.547943 1 CGCTTTT 1025 0.0 41.48781 1 AATCTGT 3735 0.0 40.78313 2 TCTCGCG 50 1.0804797E-9 40.5 1 CGACCTG 245 0.0 40.408165 12 TACCTGT 3465 0.0 40.064934 7 CACCGAG 135 0.0 40.0 16 ATGATAC 10360 0.0 39.57046 3 CACCGGT 245 0.0 39.489796 16 GAATGAT 10800 0.0 39.479168 1 >>END_MODULE