SRR2933418.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933418.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	737099
Sequences flagged as poor quality	0
Sequence length	51
%GC	36

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22906	3.1075879902156966	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCG	18789	2.5490470072541136	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC	18307	2.4836555198148416	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGC	16904	2.2933147379117322	No Hit
GAACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCT	4240	0.5752280222873725	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC	3604	0.4889438189442667	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGCTAAGT	3562	0.4832458055159483	No Hit
GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC	3350	0.4544844044015797	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCT	3244	0.4401037038443954	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA	3087	0.418803986981396	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTT	1362	0.18477843546117959	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGT	1251	0.1697193999720526	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATG	822	0.1115182628113727	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTAT	773	0.10487058047833465	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGAA	20	7.031639E-4	45.0	19
ACGATAC	25	3.8894395E-5	45.0	3
CAAGACG	25	3.8894395E-5	45.0	38
CGATACG	20	7.031639E-4	45.0	4
CGTTTTT	21085	0.0	44.5198	1
TACGGCT	1980	0.0	42.5	7
CCGATGA	605	0.0	42.39669	18
CGGCTGT	2030	0.0	42.00739	9
CGATGAA	600	0.0	42.000004	19
ACGGCTG	1995	0.0	41.842106	8
GATACCT	2290	0.0	41.46288	5
TGATACC	2320	0.0	40.926723	4
ATACCTG	2345	0.0	40.682304	6
CGGTAGT	100	0.0	40.5	12
TGATGCG	50	1.0804797E-9	40.5	4
GAATGAC	410	0.0	40.060974	1
CACCGGT	130	0.0	39.807693	16
ATGATAC	7365	0.0	39.68432	3
GAATGAT	7725	0.0	39.6699	1
ATACGGC	4940	0.0	39.352226	6