##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933418.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 737099 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.544788420551377 31.0 28.0 33.0 25.0 34.0 2 28.855895883727968 31.0 28.0 33.0 16.0 34.0 3 28.828842529972228 31.0 28.0 34.0 16.0 34.0 4 33.24995421239209 35.0 32.0 37.0 28.0 37.0 5 34.29695875316613 35.0 33.0 37.0 30.0 37.0 6 33.757468128433224 35.0 33.0 37.0 28.0 37.0 7 33.70616158752081 35.0 33.0 37.0 29.0 37.0 8 33.61510597626642 35.0 33.0 37.0 28.0 37.0 9 34.84517819180327 37.0 34.0 39.0 28.0 39.0 10 34.747508814962444 37.0 33.0 39.0 27.0 39.0 11 35.03976535038034 37.0 34.0 39.0 28.0 39.0 12 35.162020298494504 37.0 34.0 39.0 28.0 39.0 13 35.27759364752903 37.0 34.0 39.0 30.0 39.0 14 36.087503849550735 38.0 34.0 40.0 28.0 41.0 15 36.37816765454844 38.0 34.0 40.0 30.0 41.0 16 36.37039664956811 38.0 34.0 40.0 30.0 41.0 17 35.629399849952314 38.0 33.0 40.0 27.0 41.0 18 35.4376766214579 38.0 34.0 39.0 27.0 40.0 19 34.73891702471445 37.0 33.0 38.0 27.0 40.0 20 33.92979097787407 35.0 32.0 38.0 27.0 40.0 21 34.30708900703976 35.0 33.0 38.0 27.0 40.0 22 34.77517402682679 35.0 33.0 39.0 29.0 40.0 23 35.134394430056204 35.0 34.0 39.0 30.0 40.0 24 34.57883405078558 35.0 33.0 39.0 27.0 40.0 25 33.56689942599298 35.0 33.0 38.0 24.0 40.0 26 33.58665118254129 35.0 32.0 38.0 24.0 40.0 27 34.32012389109197 35.0 33.0 38.0 27.0 40.0 28 34.08951714762875 35.0 33.0 39.0 25.0 40.0 29 34.008232272734055 35.0 33.0 39.0 24.0 40.0 30 33.25441901291414 35.0 33.0 39.0 21.0 40.0 31 33.13775354463919 35.0 33.0 39.0 21.0 40.0 32 32.40407462226919 35.0 31.0 39.0 16.0 40.0 33 31.59011340403392 35.0 30.0 39.0 12.0 40.0 34 30.840196500063087 35.0 26.0 39.0 8.0 40.0 35 30.37382495431414 35.0 23.0 40.0 7.0 41.0 36 29.698121961907425 35.0 21.0 39.0 7.0 40.0 37 29.5970676937562 35.0 21.0 39.0 7.0 40.0 38 29.44952984605867 35.0 20.0 39.0 7.0 40.0 39 29.081347281708428 35.0 18.0 39.0 7.0 40.0 40 28.886822529945096 35.0 18.0 39.0 7.0 40.0 41 28.46387798653912 34.0 18.0 39.0 7.0 40.0 42 28.63657392019254 35.0 18.0 39.0 7.0 40.0 43 28.52597819288861 35.0 18.0 39.0 7.0 40.0 44 28.630684616313413 35.0 18.0 39.0 7.0 40.0 45 28.80994547543817 35.0 18.0 39.0 7.0 40.0 46 28.599802740201792 35.0 18.0 39.0 7.0 40.0 47 28.466783973387564 35.0 18.0 39.0 7.0 40.0 48 28.319985510765854 34.0 18.0 38.0 7.0 40.0 49 28.507976540464714 35.0 18.0 39.0 7.0 40.0 50 28.415090781563944 35.0 18.0 39.0 7.0 40.0 51 27.28821637256325 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 14.0 9 17.0 10 34.0 11 46.0 12 62.0 13 79.0 14 134.0 15 212.0 16 389.0 17 813.0 18 1732.0 19 3132.0 20 4993.0 21 7321.0 22 10773.0 23 15709.0 24 23333.0 25 33450.0 26 41589.0 27 41391.0 28 35877.0 29 31576.0 30 30801.0 31 34601.0 32 39130.0 33 46698.0 34 53117.0 35 63285.0 36 71711.0 37 76249.0 38 59850.0 39 8976.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.69899023062031 2.2834110479053695 31.613663836201106 40.403934885273216 2 40.60648569595129 15.791908549597816 30.672948952583027 12.928656801867863 3 11.31896800836794 15.983334667392032 59.50435423192813 13.193343092311888 4 10.42383723217641 2.6020927989320297 71.99521366872021 14.978856300171348 5 20.476760923566577 3.160226780934447 60.17848348729275 16.184528808206224 6 12.760429738746085 13.97641293774649 63.49201396284624 9.771143360661187 7 49.88556489698127 1.2087928487218136 46.378030630892184 2.527611623404726 8 49.05067026274625 10.227255768899429 37.66780310378932 3.0542708645650043 9 46.02787413902339 2.7430507977897136 36.71433552345072 14.514739539736182 10 26.932474470864836 16.355740545028553 44.30788808558959 12.403896898517024 11 23.135155521849846 15.845090008262119 47.96926871424327 13.050485755644765 12 17.07613224275165 13.896776416736422 51.80715209218844 17.219939248323495 13 16.79665825079128 14.682559601898795 57.25567393253823 11.265108214771692 14 15.048860465147829 20.150753155274938 49.94851437866556 14.851872000911682 15 11.843727911718778 15.199450820039099 59.03169045135049 13.925130816891626 16 13.794890509958634 16.91021151839848 49.5634914712949 19.731406500347987 17 14.60902809527621 17.011147756271548 53.622919038012526 14.75690511043971 18 14.484078800812375 16.295233069099265 52.33435400129426 16.886334128794097 19 14.754598771671104 18.460342504873836 49.220389662718304 17.564669060736755 20 16.267828337848783 18.074776929557633 54.166400985484984 11.490993747108599 21 16.18208680245123 21.441081862816258 50.27235147517498 12.104479859557536 22 14.144232999909104 14.223598186946393 53.66985981530297 17.96230899784154 23 14.57565401662463 20.766002938546926 51.728193906110306 12.930149138718136 24 15.702232671594995 17.1430160670412 49.17941823282897 17.975333028534838 25 13.460200054538129 24.53591715631143 47.571628777138486 14.432254012011954 26 13.909257779484166 16.7076607077204 51.399744132063674 17.983337380731758 27 17.057138864657258 18.36551128138825 48.22907099317731 16.34827886077718 28 12.811033524669007 18.626805897172563 52.41290518641323 16.149255391745207 29 17.078709915493036 18.786485940151863 47.78109860412238 16.353705540232724 30 17.460069814231197 19.941690329250207 49.46241956643544 13.13582029008315 31 19.58420782011643 17.21030689228991 45.45196778180407 17.75351750578959 32 18.448268143085258 21.152653849754238 44.084037558048514 16.315040449111994 33 17.36564559170478 18.50958962093287 43.75043243851911 20.374332348843236 34 18.071249587911527 26.635228103687563 40.24452617626669 15.048996132134217 35 19.09458566624022 24.472560673667985 38.333656672984226 18.099196987107565 36 22.871961568256097 24.469168999008275 36.30448555757096 16.354383875164665 37 19.741445857340736 23.926229719481373 37.948498098627184 18.383826324550707 38 21.87399521638206 23.374336418852828 37.41858284979358 17.33308551497153 39 20.345570947728866 25.332960701344053 34.91688362078907 19.404584730138012 40 18.85133475964558 25.076007429124175 39.412616215732214 16.660041595498026 41 21.58393919948338 27.16134467690229 33.95039200975717 17.304324113857163 42 17.801136618011963 25.891094683346473 38.7941104247869 17.513658273854666 43 22.47147262443715 22.76247831024055 35.287661494588924 19.478387570733375 44 21.241244391865948 23.296327901679422 35.367705016558155 20.09472268989647 45 18.551782053699707 22.840758161386734 35.48953397033506 23.117925814578502 46 22.525603752006177 24.395094824440136 33.68190704369427 19.397394379859424 47 16.68486865400713 21.901399947632544 42.85950733890563 18.5542240594547 48 19.78282428818924 25.313288988317716 33.65748698614433 21.246399737348714 49 17.72095742905634 22.87413224003831 39.261347525909 20.143562804996343 50 19.726522488838 21.592486219625858 36.93791471701901 21.74307657451713 51 18.735068152310614 22.398348118773733 34.74607888492591 24.12050484398975 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 1109.0 2 2145.0 3 24413.5 4 46682.0 5 35442.0 6 24202.0 7 23297.0 8 22392.0 9 21974.5 10 21557.0 11 20875.0 12 20193.0 13 19225.5 14 18258.0 15 17330.0 16 16402.0 17 15361.0 18 14320.0 19 13420.5 20 12521.0 21 11708.5 22 10896.0 23 10356.0 24 9816.0 25 9547.0 26 9227.5 27 9177.0 28 9805.0 29 10433.0 30 11296.5 31 12160.0 32 12984.5 33 13809.0 34 14943.5 35 16078.0 36 17050.0 37 18022.0 38 19266.5 39 20511.0 40 21975.0 41 23439.0 42 24442.5 43 25446.0 44 27973.0 45 30500.0 46 68372.0 47 106244.0 48 75171.5 49 44099.0 50 40618.5 51 37138.0 52 32456.0 53 27774.0 54 26491.5 55 25209.0 56 23502.0 57 21795.0 58 20170.5 59 18546.0 60 16430.0 61 14314.0 62 12372.5 63 10431.0 64 8836.0 65 7241.0 66 6356.5 67 5472.0 68 4599.5 69 3727.0 70 3072.0 71 2417.0 72 2137.5 73 1858.0 74 1532.0 75 944.0 76 682.0 77 496.0 78 310.0 79 236.0 80 162.0 81 130.5 82 99.0 83 67.0 84 35.0 85 25.0 86 15.0 87 11.0 88 7.0 89 5.5 90 4.0 91 4.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 737099.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.02475697315416 #Duplication Level Percentage of deduplicated Percentage of total 1 83.26717678627806 39.15618752215389 2 5.633637392481259 5.2984085851261025 3 2.5613090268677343 3.6133480356480354 4 1.730630626252528 3.255299384392909 5 1.3116027256711693 3.083889971000666 6 1.0465896687228546 2.9529374893383697 7 0.8542979113626576 2.8121206165151515 8 0.675393883450561 2.5408186584333947 9 0.5452159745029703 2.3074783828995233 >10 2.279196495049308 15.818697025397649 >50 0.057731653097437656 1.8998205073813377 >100 0.03194288450964195 2.848903230845522 >500 0.0017583239179613697 0.5477865013596921 >1k 0.0023444318906151594 3.2660478194275977 >5k 0.0 0.0 >10k+ 0.0011722159453075797 10.59825627008012 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22906 3.1075879902156966 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCG 18789 2.5490470072541136 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC 18307 2.4836555198148416 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGC 16904 2.2933147379117322 No Hit GAACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCT 4240 0.5752280222873725 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC 3604 0.4889438189442667 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGCTAAGT 3562 0.4832458055159483 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 3350 0.4544844044015797 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCT 3244 0.4401037038443954 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA 3087 0.418803986981396 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTT 1362 0.18477843546117959 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGT 1251 0.1697193999720526 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATG 822 0.1115182628113727 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTAT 773 0.10487058047833465 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06281381469788998 0.0 2 0.0 0.0 0.0 0.5874380510623404 0.0 3 0.0 0.0 0.0 0.6768425950923824 0.0 4 0.0 0.0 0.0 1.3682015577283377 0.0 5 0.0 0.0 0.0 4.23416664518606 0.0 6 0.0 0.0 0.0 4.511198631391442 0.0 7 0.0 0.0 0.0 5.071774619148853 0.0 8 0.0 0.0 0.0 5.69638542448165 0.0 9 0.0 0.0 0.0 5.795422324545278 0.0 10 0.0 0.0 0.0 8.820253453063971 0.0 11 0.0 0.0 0.0 8.977762824261056 0.0 12 0.0 0.0 0.0 11.742656006859322 0.0 13 0.0 0.0 0.0 11.952261500829604 0.0 14 0.0 0.0 0.0 12.11248421175446 0.0 15 0.0 0.0 0.0 12.658679498954687 0.0 16 0.0 0.0 0.0 12.929606470772583 0.0 17 0.0 0.0 0.0 13.054962766195585 0.0 18 0.0 0.0 0.0 13.164310357224743 0.0 19 0.0 0.0 0.0 13.86285967013929 0.0 20 0.0 0.0 0.0 14.011822021193897 0.0 21 0.0 0.0 0.0 14.124832620855543 0.0 22 0.0 0.0 0.0 14.351803489083556 0.0 23 0.0 0.0 0.0 14.46413575381326 0.0 24 0.0 0.0 0.0 14.570770005114646 0.0 25 0.0 0.0 0.0 14.656647207498585 0.0 26 0.0 0.0 0.0 14.768165470309958 0.0 27 0.0 0.0 0.0 14.926217509452597 0.0 28 0.0 0.0 0.0 15.017792725264856 0.0 29 0.0 0.0 0.0 15.129039654103451 0.0 30 0.0 0.0 0.0 15.25670228829506 0.0 31 0.0 0.0 0.0 15.372290560698088 0.0 32 0.0 0.0 0.0 15.495340517352487 0.0 33 0.0 0.0 0.0 15.622596150584927 0.0 34 0.0 0.0 0.0 15.794486222339197 0.0 35 0.0 0.0 0.0 15.941549235584365 0.0 36 0.0 0.0 0.0 16.079386893755114 0.0 37 0.0 0.0 0.0 16.226992574945836 0.0 38 0.0 0.0 0.0 16.402681322318983 0.0 39 0.0 0.0 0.0 16.65339391316499 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGAA 20 7.031639E-4 45.0 19 ACGATAC 25 3.8894395E-5 45.0 3 CAAGACG 25 3.8894395E-5 45.0 38 CGATACG 20 7.031639E-4 45.0 4 CGTTTTT 21085 0.0 44.5198 1 TACGGCT 1980 0.0 42.5 7 CCGATGA 605 0.0 42.39669 18 CGGCTGT 2030 0.0 42.00739 9 CGATGAA 600 0.0 42.000004 19 ACGGCTG 1995 0.0 41.842106 8 GATACCT 2290 0.0 41.46288 5 TGATACC 2320 0.0 40.926723 4 ATACCTG 2345 0.0 40.682304 6 CGGTAGT 100 0.0 40.5 12 TGATGCG 50 1.0804797E-9 40.5 4 GAATGAC 410 0.0 40.060974 1 CACCGGT 130 0.0 39.807693 16 ATGATAC 7365 0.0 39.68432 3 GAATGAT 7725 0.0 39.6699 1 ATACGGC 4940 0.0 39.352226 6 >>END_MODULE