##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933417.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 486561 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.766068386081088 31.0 28.0 31.0 16.0 33.0 2 29.075330739619492 31.0 30.0 33.0 16.0 34.0 3 29.222249625432372 31.0 30.0 33.0 16.0 34.0 4 32.26742998308537 35.0 32.0 37.0 19.0 37.0 5 33.73077373648936 35.0 33.0 37.0 28.0 37.0 6 32.91491097724643 35.0 33.0 37.0 23.0 37.0 7 32.210374444314276 35.0 32.0 35.0 25.0 37.0 8 33.06184836022616 35.0 32.0 36.0 28.0 37.0 9 33.082182912317265 35.0 31.0 37.0 25.0 39.0 10 31.955308789648164 35.0 28.0 39.0 15.0 39.0 11 32.52923477220739 37.0 30.0 39.0 17.0 39.0 12 33.39035393301148 35.0 31.0 39.0 23.0 39.0 13 33.477013159706594 35.0 32.0 39.0 25.0 39.0 14 33.668335522164746 37.0 32.0 40.0 20.0 41.0 15 34.32474653743313 37.0 32.0 40.0 25.0 41.0 16 34.60541021577973 37.0 32.0 40.0 25.0 41.0 17 32.630963024163464 36.0 29.0 40.0 18.0 41.0 18 33.28269836670017 36.0 31.0 39.0 23.0 39.0 19 33.05204075131381 36.0 31.0 37.0 22.0 39.0 20 32.5455348866843 35.0 31.0 36.0 24.0 39.0 21 32.83938498975463 35.0 31.0 37.0 24.0 39.0 22 32.92366013716677 35.0 31.0 37.0 25.0 39.0 23 34.00195453396388 35.0 33.0 38.0 27.0 40.0 24 32.180119245068965 35.0 31.0 37.0 21.0 39.0 25 31.363448776206887 34.0 29.0 37.0 18.0 39.0 26 30.529467014413402 33.0 25.0 37.0 18.0 39.0 27 32.28662387655402 34.0 30.0 37.0 22.0 39.0 28 32.40131042150933 35.0 31.0 37.0 21.0 39.0 29 32.493224898830775 35.0 31.0 38.0 21.0 40.0 30 31.50526449920976 35.0 30.0 38.0 18.0 40.0 31 31.78312071867659 35.0 30.0 37.0 20.0 40.0 32 31.44391967297009 35.0 30.0 37.0 17.0 40.0 33 31.104469943131487 35.0 30.0 38.0 15.0 40.0 34 29.990317760774087 35.0 25.0 38.0 8.0 40.0 35 29.362604072254044 35.0 23.0 38.0 7.0 40.0 36 28.745795491212817 34.0 21.0 38.0 7.0 40.0 37 28.79679012497919 34.0 21.0 38.0 7.0 40.0 38 28.81997529600605 34.0 21.0 38.0 7.0 40.0 39 28.3558032805753 34.0 20.0 38.0 7.0 40.0 40 28.193318001237255 33.0 18.0 38.0 7.0 40.0 41 27.755391410326762 33.0 18.0 38.0 7.0 40.0 42 28.066639126440467 33.0 18.0 38.0 7.0 40.0 43 28.09922496870896 34.0 18.0 38.0 7.0 40.0 44 28.084552604914904 34.0 18.0 38.0 7.0 40.0 45 28.369390477247457 34.0 20.0 38.0 7.0 40.0 46 28.14282279097585 34.0 18.0 38.0 7.0 40.0 47 28.150324419754153 34.0 18.0 38.0 7.0 40.0 48 27.876794482089604 34.0 18.0 37.0 7.0 40.0 49 27.673381138233438 33.0 18.0 37.0 7.0 40.0 50 27.833891331199993 34.0 18.0 38.0 7.0 40.0 51 26.322596755596933 31.0 15.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 18.0 10 25.0 11 33.0 12 42.0 13 57.0 14 100.0 15 258.0 16 589.0 17 1104.0 18 1739.0 19 3077.0 20 4514.0 21 6504.0 22 9336.0 23 12730.0 24 17436.0 25 23715.0 26 28985.0 27 28560.0 28 27178.0 29 26635.0 30 28560.0 31 32092.0 32 36204.0 33 41015.0 34 46055.0 35 48419.0 36 36961.0 37 20188.0 38 4349.0 39 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.733063274697315 2.283166961593716 34.660196768750474 42.3235729949585 2 43.653930339669635 10.252979585293518 33.0630691732383 13.030020901798542 3 12.279035927663747 10.282575052254495 63.91428823929579 13.524100780785966 4 11.240933819192248 2.7809462739512623 70.36425032010375 15.61386958675274 5 17.414877065773872 3.2892073141908207 63.35033017442828 15.945585445607025 6 13.384344409025795 9.690665713034953 65.89101880339773 11.033971074541526 7 51.311551891746355 1.2886359572592132 44.76745978407641 2.6323523669180227 8 52.492493233119795 6.847240119943851 37.62734785566455 3.0329187912718036 9 48.46483791343737 2.801293157486934 37.63228043349138 11.101588495584314 10 25.43031603437185 18.019323373636606 44.495140383220196 12.055220208771358 11 21.654838756086082 16.500500451125347 49.480948945764254 12.36371184702432 12 17.48619392018678 14.565696798551468 52.54161348731196 15.406495793949782 13 16.597302290976877 15.073135742486555 56.5624865124825 11.767075454054066 14 14.665992547696998 17.36329052266828 52.439468021481375 15.531248908153344 15 12.26793762755338 15.480689985428342 58.25004470148656 14.001327685531722 16 14.295638162532551 15.504530778258019 51.641418033915585 18.55841302529385 17 14.957014639479944 15.642026385180893 54.32289065502578 15.078068320313385 18 14.842332205006157 15.201588290060238 53.56943939197757 16.386640112956034 19 15.375050610303745 17.409327915718688 50.750471163944496 16.46515031003307 20 16.516120280910307 17.490509925785254 54.069684993248536 11.923684800055904 21 16.705613479091006 19.076539221187065 51.20570699254564 13.012140307176285 22 14.750462942981454 14.794239571194566 53.84093669652932 16.614360789294665 23 14.766082772766415 19.38215352237438 51.92093077743593 13.930832927423284 24 14.717990138954828 16.714039966211843 51.14363872155804 17.42433117327529 25 14.121148221908456 20.51089174841387 49.57549002077848 15.792470008899192 26 13.963100207373794 17.427002986264824 52.009922702394974 16.59997410396641 27 15.31791491714297 17.85264334790499 50.653669324092974 16.17577241085907 28 13.10154328028757 17.963626349008656 53.26300299448579 15.671827376217987 29 16.359099886756233 17.482905534968893 50.1819915694024 15.976003008872475 30 16.24112906706456 18.4809304485974 51.198102601729275 14.079837882608759 31 17.596971397214325 17.313759220323867 48.34337318445169 16.745896198010115 32 17.307799022116445 20.231790053045763 46.99842363033618 15.461987294501615 33 16.818446196879734 18.430782574024633 46.01190806497027 18.73886316412536 34 17.0718573827331 24.643569870992536 42.80778771829226 15.476785027982103 35 17.935675074656622 23.72569934705001 40.59902047225322 17.739605106040145 36 21.208851510910247 22.96238292834814 38.9990155396754 16.829750021066218 37 19.247740776593275 23.49140190027561 39.33607502450875 17.92478229862237 38 20.404635801060916 22.891477122087466 39.917091587694046 16.786795489157576 39 18.853134550446914 24.356247212579717 37.987426037023106 18.803192199950264 40 18.508881722949436 24.083516763571268 40.71555262341207 16.692048890067227 41 20.352021637574733 25.223353289721125 37.22513723870183 17.199487834002312 42 17.981712467707027 24.607192109519673 39.9499754398729 17.461119982900396 43 20.666678998111234 22.48001792169944 38.290985097449244 18.562317982740087 44 20.43834174954425 22.88531139980393 37.60391811098711 19.07242873966471 45 18.514430873004617 22.565310413288366 37.835132696619745 21.085126017087273 46 20.03756980111435 23.682539291065254 36.686253111120706 19.593637796699696 47 17.0052675820709 21.941955890422786 42.694543952351296 18.358232575155018 48 19.169641627668472 24.174769453367613 36.55923923207985 20.09634968688407 49 17.53510865030284 22.571270611495784 39.69985263923742 20.19376809896395 50 18.7037185471092 21.54077289384065 38.58878948374407 21.166719075306077 51 18.330897873031336 22.057254897124924 37.26624205392541 22.345605175918333 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 88.0 1 467.5 2 847.0 3 21758.0 4 42669.0 5 29730.0 6 16791.0 7 15982.5 8 15174.0 9 14920.5 10 14667.0 11 13972.0 12 13277.0 13 12633.5 14 11990.0 15 11276.5 16 10563.0 17 9774.5 18 8986.0 19 8273.0 20 7560.0 21 6991.5 22 6423.0 23 6093.5 24 5764.0 25 5630.0 26 5599.0 27 5702.0 28 6119.5 29 6537.0 30 7120.5 31 7704.0 32 8131.0 33 8558.0 34 9460.5 35 10363.0 36 11137.0 37 11911.0 38 12728.0 39 13545.0 40 14743.5 41 15942.0 42 16836.0 43 17730.0 44 19290.5 45 20851.0 46 33767.5 47 46684.0 48 39244.5 49 31805.0 50 29776.0 51 27747.0 52 24381.0 53 21015.0 54 19343.0 55 17671.0 56 16120.0 57 14569.0 58 13408.5 59 12248.0 60 11092.5 61 9937.0 62 8754.5 63 7572.0 64 6505.0 65 5438.0 66 4846.0 67 4254.0 68 3565.5 69 2877.0 70 2423.5 71 1970.0 72 1716.5 73 1463.0 74 1264.5 75 809.5 76 553.0 77 419.5 78 286.0 79 210.5 80 135.0 81 109.5 82 84.0 83 58.5 84 33.0 85 19.0 86 5.0 87 4.5 88 4.0 89 3.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 486561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.780950181891946 #Duplication Level Percentage of deduplicated Percentage of total 1 82.10784382454244 40.87406482972112 2 6.655379819876346 6.626222625096667 3 2.989103604844755 4.464012529238711 4 1.8809576810519355 3.745434424587736 5 1.3469271797616533 3.3525657417175543 6 1.0502463015363108 3.136935528929721 7 0.808921767171242 2.818822593481971 8 0.6365221344555095 2.5349341332000996 9 0.511012371861562 2.289481328337377 >10 1.9325024653721248 14.037392201163904 >50 0.04238993647035394 1.4761032618671937 >100 0.03315648496046702 3.1745099731143624 >500 0.002098511706358672 0.7623921871721935 >1k 0.0016788093650869378 1.9123528882398155 >5k 8.394046825434689E-4 2.9377902285086908 >10k+ 4.1970234127173444E-4 5.856985525622938 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28033 5.761456425813002 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCG 8098 1.6643339684027287 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGC 5963 1.2255400658910187 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC 4798 0.9861045172136689 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGCTAAGT 1572 0.32308384765733383 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 1401 0.2879392306411735 No Hit GAACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCT 1382 0.2840342731949334 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC 958 0.19689206492094516 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA 809 0.16626897757937853 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCT 643 0.13215198094380767 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGGCTAAGTCGTATGCCG 642 0.13194645686768977 No Hit GAATCTTTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC 597 0.1226978734423844 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0774825766964471 0.0 2 0.0 0.0 0.0 0.511960473609681 0.0 3 0.0 0.0 0.0 0.6467842675430213 0.0 4 0.0 0.0 0.0 1.1462077725095106 0.0 5 0.0 0.0 0.0 2.4535464206954525 0.0 6 0.0 0.0 0.0 2.7248382011710763 0.0 7 0.0 0.0 0.0 3.0405231820881657 0.0 8 0.0 0.0 0.0 3.46225858628209 0.0 9 0.0 0.0 0.0 3.6240060341868747 0.0 10 0.0 0.0 0.0 5.794134753915747 0.0 11 0.0 0.0 0.0 6.2536865881153645 0.0 12 0.0 0.0 0.0 8.033114039144115 0.0 13 0.0 0.0 0.0 8.236171826348597 0.0 14 0.0 0.0 0.0 8.361541512780514 0.0 15 0.0 0.0 0.0 8.698806521689983 0.0 16 0.0 0.0 0.0 8.912757084928714 0.0 17 0.0 0.0 0.0 9.120541925883908 0.0 18 0.0 0.0 0.0 9.334081440970403 0.0 19 0.0 0.0 0.0 9.90995990225275 0.0 20 0.0 0.0 0.0 10.11897788766465 0.0 21 0.0 0.0 0.0 10.358413436342 0.0 22 0.0 0.0 0.0 10.692801108185819 0.0 23 0.0 0.0 0.0 10.940663143984002 0.0 24 0.0 0.0 0.0 11.136527588524357 0.0 25 0.0 0.0 0.0 11.302591042027618 0.0 26 0.0 0.0 0.0 11.463310869551814 0.0 27 0.0 0.0 0.0 11.657531121483226 0.0 28 0.0 0.0 0.0 11.827088484280491 0.0 29 0.0 0.0 0.0 12.001783948980703 0.0 30 0.0 0.0 0.0 12.202786495424007 0.0 31 0.0 0.0 0.0 12.376659863819746 0.0 32 0.0 0.0 0.0 12.556904478575143 0.0 33 0.0 0.0 0.0 12.729750226590294 0.0 34 0.0 0.0 0.0 12.936712971241016 0.0 35 0.0 0.0 0.0 13.150252486327512 0.0 36 0.0 0.0 0.0 13.339745684508213 0.0 37 0.0 0.0 0.0 13.540131658723162 0.0 38 0.0 0.0 0.0 13.753876697885774 0.0 39 0.0 0.0 0.0 14.109433349569736 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGGG 50 2.1827873E-11 45.0 3 TATCGGG 25 3.8874776E-5 45.0 3 CGTTTTT 15925 0.0 44.604397 1 TGATACC 1090 0.0 41.90367 4 ACGGCTG 815 0.0 41.68712 8 CGGCTGT 785 0.0 41.560513 9 TACGGCT 820 0.0 41.432926 7 CGACCAA 60 3.6379788E-12 41.249996 29 ACGACCA 60 3.6379788E-12 41.249996 28 GAATGAT 3170 0.0 41.16719 1 GATACCT 1110 0.0 41.148647 5 CCGATGA 170 0.0 41.029415 18 ATACGGC 1880 0.0 40.93085 6 AATGATA 2975 0.0 40.613445 2 ATGATAC 3025 0.0 40.46281 3 GCGACCA 740 0.0 40.43919 11 CGACCAC 735 0.0 40.408165 12 TGATACG 1925 0.0 40.207794 4 GATACGG 1915 0.0 40.182766 5 GTTTTTT 17915 0.0 40.06419 2 >>END_MODULE