##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933416.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 683128 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.45068859715895 31.0 28.0 33.0 25.0 34.0 2 28.672213699335995 31.0 28.0 33.0 16.0 34.0 3 28.651561639985477 31.0 27.0 34.0 16.0 34.0 4 33.17998383904627 35.0 32.0 37.0 28.0 37.0 5 34.27664215198323 35.0 33.0 37.0 30.0 37.0 6 33.693331264418966 35.0 33.0 37.0 28.0 37.0 7 33.72255419189376 35.0 33.0 37.0 29.0 37.0 8 33.564460833108875 35.0 33.0 37.0 28.0 37.0 9 34.78842618074504 37.0 34.0 39.0 28.0 39.0 10 34.78139235985057 37.0 33.0 39.0 28.0 39.0 11 35.10697409563069 37.0 34.0 39.0 28.0 39.0 12 35.2185666522233 37.0 34.0 39.0 29.0 39.0 13 35.33934928739563 37.0 34.0 39.0 30.0 39.0 14 36.12973264161329 38.0 34.0 40.0 29.0 41.0 15 36.41991691161832 38.0 34.0 40.0 30.0 41.0 16 36.35909375695331 38.0 34.0 40.0 30.0 41.0 17 35.621646309330025 38.0 33.0 40.0 27.0 41.0 18 35.37661463151854 38.0 34.0 39.0 27.0 40.0 19 34.67685411811549 37.0 33.0 38.0 27.0 40.0 20 33.880372346031784 35.0 32.0 38.0 27.0 40.0 21 34.23837113981567 35.0 33.0 38.0 27.0 40.0 22 34.71741167101919 35.0 33.0 39.0 29.0 40.0 23 35.01697778454404 35.0 33.0 39.0 30.0 40.0 24 34.461506481947744 35.0 33.0 38.0 27.0 40.0 25 33.471160602405405 35.0 33.0 38.0 24.0 40.0 26 33.47306946867937 35.0 32.0 38.0 24.0 40.0 27 34.25255442611048 35.0 33.0 38.0 26.0 40.0 28 33.950180639645865 35.0 33.0 39.0 24.0 40.0 29 33.86392740452741 35.0 33.0 39.0 24.0 40.0 30 33.137690154700145 35.0 33.0 39.0 21.0 40.0 31 33.129722394631756 35.0 33.0 39.0 21.0 40.0 32 32.31898560738251 35.0 31.0 39.0 16.0 40.0 33 31.52938834303381 35.0 30.0 39.0 12.0 40.0 34 30.787568362005363 35.0 25.0 39.0 8.0 40.0 35 30.14518216205455 35.0 23.0 39.0 7.0 40.0 36 29.587305746507244 35.0 21.0 39.0 7.0 40.0 37 29.356542258551837 35.0 20.0 39.0 7.0 40.0 38 29.273317738403346 35.0 20.0 39.0 7.0 40.0 39 28.87895240716235 35.0 18.0 39.0 7.0 40.0 40 28.622419224508437 35.0 18.0 39.0 7.0 40.0 41 28.317843800868943 34.0 18.0 39.0 7.0 40.0 42 28.40830415383354 35.0 17.0 39.0 7.0 40.0 43 28.297575271398625 35.0 17.0 39.0 7.0 40.0 44 28.358928341394293 35.0 17.0 39.0 7.0 40.0 45 28.51367825649073 35.0 18.0 39.0 7.0 40.0 46 28.27794791020131 35.0 17.0 39.0 7.0 40.0 47 28.12181758030706 34.0 17.0 39.0 7.0 40.0 48 28.007348549612956 34.0 17.0 38.0 7.0 40.0 49 28.148822768207424 34.0 17.0 39.0 7.0 40.0 50 28.09303088147463 34.0 17.0 39.0 7.0 40.0 51 26.991636999215373 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 14.0 9 21.0 10 38.0 11 42.0 12 80.0 13 86.0 14 119.0 15 211.0 16 407.0 17 829.0 18 1651.0 19 3025.0 20 4827.0 21 7067.0 22 10301.0 23 14967.0 24 21795.0 25 31701.0 26 39711.0 27 39058.0 28 33882.0 29 30356.0 30 30189.0 31 32142.0 32 36316.0 33 42839.0 34 49303.0 35 58105.0 36 65289.0 37 68097.0 38 52913.0 39 7745.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.783015774496143 2.3721762246606786 30.969013127847195 40.87579487299598 2 40.90185148317738 15.989975524352683 30.098898010328956 13.009274982140976 3 11.11490086777295 16.183350704406788 59.479775386164825 13.221973041655444 4 9.90766005785153 2.612248363410664 72.6515382183134 14.8285533604244 5 20.28843789158108 3.0676534997833493 60.831352250237146 15.812556358398428 6 12.490338560269818 13.942921385157685 63.68337998149688 9.883360073075616 7 48.91791875021958 1.0835451042849948 47.465043154430795 2.533492991064632 8 48.11118853274935 10.444309119228022 38.38080125540163 3.063701092621002 9 45.00854891030671 2.745312737876357 37.647702919511424 14.598435432305513 10 26.0996475038353 16.855991849258118 44.65707744375871 12.387283203147872 11 21.732383974891967 15.30708739796934 49.856103102200464 13.104425524938227 12 16.537896265414386 13.609748099916851 52.463959902097415 17.38839573257135 13 15.919856893583633 14.542808961131733 58.323623098453005 11.213711046831634 14 14.739258235645442 19.76349966624117 50.59827733601902 14.898964762094366 15 11.625786089868956 14.981526156152288 59.20515628110691 14.187531472871848 16 13.259594102422973 16.759816608307666 49.75465798503355 20.225931304235807 17 13.90954550245342 17.156960335398345 54.22292747479243 14.710566687355811 18 13.930185850967899 15.769079879612605 53.20598775046551 17.094746518953986 19 13.75232752866227 18.78535208628544 49.74968087971801 17.712639505334284 20 15.844175615697203 17.280948811935684 55.028193837758074 11.846681734609033 21 15.488019814734574 21.81099296178754 50.42451780632619 12.27646941715169 22 14.021676757503718 14.339772341347448 53.35866777529248 18.279883125856355 23 14.12107247836423 20.83709055989507 51.99157405347168 13.050262908269023 24 15.627378763569933 16.649441978662857 50.1823962712698 17.540782986497405 25 12.823072689159279 24.438172641144853 48.24674145987282 14.492013209823048 26 14.182407982105843 15.802894918668246 52.19212212059819 17.822574978627724 27 16.151585061657553 18.61188532749353 48.45197386141397 16.78455574943495 28 12.504977105315549 17.954614654940215 52.94659273225516 16.59381550748908 29 18.99146280052933 16.40029394198452 48.47612746073942 16.132115796746728 30 13.654102891405417 22.296846271855348 50.37386844046796 13.675182396271271 31 17.053465821925027 17.01730861566207 46.0389560960757 19.8902694663372 32 17.705027461910504 23.513016594254662 44.81034301038751 13.97161293344732 33 16.077514023726152 18.465353491585766 44.41568783595461 21.041444648733474 34 23.328717312128912 20.8616833155719 40.422731903830616 15.386867468468573 35 15.745219051188064 27.63420618097926 39.01377194317902 17.606802824653652 36 22.325098663793607 21.121371104683163 36.43899825508543 20.114531976437796 37 16.97661346043494 28.65890433418042 38.378751859095225 15.985730346289422 38 18.376058366806806 23.187016196086237 38.30131395580331 20.13561148130365 39 23.344966097129674 24.63608577016313 35.38238807368458 16.636560059022614 40 18.499022145190946 25.759447716972517 39.44355962572168 16.29797051211486 41 23.65091168858545 24.54488763452823 34.15128643533862 17.652914241547705 42 17.542393226452436 25.98283191437037 38.9552177629961 17.519557096181096 43 23.13431743392161 21.71862374254898 35.19969903151386 19.94735979201555 44 20.999578409902682 23.26474687027907 35.40654167301003 20.329133046808213 45 17.559373938705484 22.324513121991778 36.38351816936211 23.732594769940626 46 22.57673525312972 24.771199540935225 34.0207106135307 18.63135459240435 47 16.508619175322924 21.926198311297444 42.94890562237238 18.61627689100725 48 20.247303580002576 24.167798714150205 33.92790223794076 21.656995467906455 49 17.155789251794687 22.512911196730336 39.80864493916221 20.522654612312774 50 19.647123233127616 20.979084446838662 37.42095185675306 21.952840463280673 51 18.987510393366982 21.374617933974307 35.17364242133246 24.464229251326252 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 55.0 1 970.5 2 1886.0 3 23249.5 4 44613.0 5 33840.5 6 23068.0 7 22138.0 8 21208.0 9 20741.0 10 20274.0 11 19479.5 12 18685.0 13 17956.5 14 17228.0 15 16295.0 16 15362.0 17 14468.5 18 13575.0 19 12742.5 20 11910.0 21 11054.5 22 10199.0 23 9756.5 24 9314.0 25 9117.5 26 9036.5 27 9152.0 28 9328.0 29 9504.0 30 9968.5 31 10433.0 32 11603.0 33 12773.0 34 13891.0 35 15009.0 36 16048.0 37 17087.0 38 18228.0 39 19369.0 40 20230.0 41 21091.0 42 21895.0 43 22699.0 44 25533.5 45 28368.0 46 63425.5 47 98483.0 48 68788.0 49 39093.0 50 36676.5 51 34260.0 52 30429.0 53 26598.0 54 25041.5 55 23485.0 56 21871.5 57 20258.0 58 18461.0 59 16664.0 60 14624.0 61 12584.0 62 11207.5 63 9831.0 64 8436.0 65 7041.0 66 5739.0 67 4437.0 68 3789.5 69 3142.0 70 2636.5 71 2131.0 72 1742.5 73 1354.0 74 1113.5 75 725.0 76 577.0 77 419.5 78 262.0 79 200.5 80 139.0 81 109.0 82 79.0 83 58.5 84 38.0 85 22.5 86 7.0 87 6.5 88 6.0 89 4.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 683128.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.044301560507854 #Duplication Level Percentage of deduplicated Percentage of total 1 82.45694634764416 39.61586396084833 2 6.2670452837556425 6.021916270122293 3 2.8959472484074205 4.174012887174272 4 1.8948389942143258 3.641448641865699 5 1.428195488185212 3.4308327360863524 6 1.0818606716387549 3.1186344212799546 7 0.8521720580541816 2.8659407937015593 8 0.6384159108150756 2.4537797232180627 9 0.5268122161676575 2.277929248138655 >10 1.865723470024806 12.984799052981543 >50 0.05547331418163073 1.9360497723387267 >100 0.031300582101919355 2.908764567674958 >500 0.0015495337674216673 0.486283019964483 >1k 0.0024792540278746676 3.359760056796864 >5k 0.0 0.0 >10k+ 0.0012396270139373338 10.723984847808293 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21243 3.109666124064597 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 18546 2.714864564181237 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 16947 2.480794228900001 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 15289 2.2380871520417847 No Hit GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT 3925 0.5745628930449345 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 3546 0.5190828073216147 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT 3434 0.5026876368703962 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 3304 0.4836575283109461 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 3053 0.44691478024616177 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA 2811 0.41148950123549316 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTT 1443 0.21123420500989565 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGACATGAGTCGT 1049 0.15355833752971623 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTAT 727 0.10642222248246301 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06236020189481327 0.0 2 0.0 0.0 0.0 0.6158435900738953 0.0 3 0.0 0.0 0.0 0.7140682273307492 0.0 4 0.0 0.0 0.0 1.408959960651591 0.0 5 0.0 0.0 0.0 4.319395486643791 0.0 6 0.0 0.0 0.0 4.626951318054596 0.0 7 0.0 0.0 0.0 5.200782283847244 0.0 8 0.0 0.0 0.0 5.859663196355588 0.0 9 1.4638545045730813E-4 0.0 0.0 5.9653534915857644 0.0 10 1.4638545045730813E-4 0.0 0.0 9.214085793584804 0.0 11 1.4638545045730813E-4 0.0 0.0 9.37686641449333 0.0 12 1.4638545045730813E-4 0.0 0.0 12.098318323945147 0.0 13 1.4638545045730813E-4 0.0 0.0 12.298134463819371 0.0 14 1.4638545045730813E-4 0.0 0.0 12.462671710133387 0.0 15 1.4638545045730813E-4 0.0 0.0 12.995807520698902 0.0 16 1.4638545045730813E-4 0.0 0.0 13.251396517197362 0.0 17 1.4638545045730813E-4 0.0 0.0 13.378166317293392 0.0 18 2.9277090091461627E-4 0.0 0.0 13.486198779730884 0.0 19 2.9277090091461627E-4 0.0 0.0 14.185921232916819 0.0 20 2.9277090091461627E-4 0.0 0.0 14.340065112248363 0.0 21 2.9277090091461627E-4 0.0 0.0 14.447219261983113 0.0 22 2.9277090091461627E-4 0.0 0.0 14.65889262334438 0.0 23 2.9277090091461627E-4 0.0 0.0 14.78185640172852 0.0 24 2.9277090091461627E-4 0.0 0.0 14.901599700202597 0.0 25 2.9277090091461627E-4 0.0 0.0 14.992505064936585 0.0 26 2.9277090091461627E-4 0.0 0.0 15.109467039851975 0.0 27 2.9277090091461627E-4 0.0 0.0 15.260975981075289 0.0 28 2.9277090091461627E-4 0.0 0.0 15.363445796395405 0.0 29 2.9277090091461627E-4 0.0 0.0 15.474991509643873 0.0 30 2.9277090091461627E-4 0.0 0.0 15.604396247848134 0.0 31 2.9277090091461627E-4 0.0 0.0 15.723846775421297 0.0 32 2.9277090091461627E-4 0.0 0.0 15.857057535337448 0.0 33 2.9277090091461627E-4 0.0 0.0 15.986023117190337 0.0 34 2.9277090091461627E-4 0.0 0.0 16.178959140893067 0.0 35 2.9277090091461627E-4 0.0 0.0 16.33764096918879 0.0 36 2.9277090091461627E-4 0.0 0.0 16.47363305266363 0.0 37 2.9277090091461627E-4 0.0 0.0 16.628362473797004 0.0 38 2.9277090091461627E-4 0.0 0.0 16.797876825426567 0.0 39 2.9277090091461627E-4 0.0 0.0 17.012917052148353 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATG 20 7.0312753E-4 45.0 1 TAAGGCG 20 7.0312753E-4 45.0 29 CCTTGCG 45 3.8380676E-10 45.0 1 GTACGGG 45 3.8380676E-10 45.0 3 CGTTTTT 19980 0.0 44.481983 1 ACGGCTG 1845 0.0 42.682926 8 TACGGCT 1850 0.0 42.567566 7 GATACCT 2255 0.0 42.206207 5 TGATACC 2285 0.0 41.750546 4 CGGCTGT 1915 0.0 41.240208 9 ATACCTG 2320 0.0 41.12069 6 CCGATGA 450 0.0 41.0 18 GGCGACT 425 0.0 40.764706 10 GAATGAT 7070 0.0 40.09901 1 GCGACTG 405 0.0 40.0 11 CGATGAA 450 0.0 40.0 19 ATGATAC 6755 0.0 39.937084 3 GAATCTG 2035 0.0 39.914005 1 CGCTTTT 565 0.0 39.82301 1 CGGGATA 85 0.0 39.705883 6 >>END_MODULE