SRR2933415.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933415.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	447557
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26630	5.950080101528967	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG	8526	1.9050087474891466	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC	5953	1.3301099077882816	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC	4858	1.085448333955228	No Hit
GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC	1630	0.36419942040902054	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT	1581	0.35325109427402546	No Hit
GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT	1506	0.33649345223066557	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC	1179	0.26343013292161666	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA	860	0.19215429543052615	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT	718	0.16042649316176488	No Hit
GAATGATACCTGTCTCTTCTACACATCTGACGCGACATGAGTCGTATGCCG	687	0.15350000111717613	No Hit
GAATCTTTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC	518	0.1157394477128053	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	465	0.103897380668831	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	14950	0.0	44.593647	1
GATACCT	1060	0.0	42.0283	5
TACGGCT	800	0.0	41.90625	7
CCGATGA	145	0.0	41.89655	18
CGATGAA	140	0.0	41.785717	19
TTGTTCG	60	3.6379788E-12	41.249996	1
TGATACC	1085	0.0	40.852535	4
GAATGAT	3105	0.0	40.57971	1
CGGCTGT	790	0.0	40.443035	9
ACGGCTG	830	0.0	40.391567	8
GTTTTTT	16745	0.0	40.20305	2
ATGATAC	3015	0.0	40.0	3
AATGATA	2970	0.0	39.772728	2
ATACGGC	1925	0.0	39.62338	6
TGCGGGA	375	0.0	39.600002	4
ATACCTG	1125	0.0	39.6	6
CGACCAC	685	0.0	39.416058	12
ATGGGCG	40	3.4519144E-7	39.375	5
TCGTGCG	40	3.4519144E-7	39.375	1
CACCGGT	115	0.0	39.130436	16