##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933415.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 447557 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.61923285749078 31.0 28.0 31.0 16.0 33.0 2 28.896710363149275 31.0 30.0 33.0 16.0 34.0 3 29.028492460178256 31.0 30.0 33.0 16.0 34.0 4 32.17115585277406 35.0 30.0 37.0 19.0 37.0 5 33.719711679182765 35.0 33.0 37.0 28.0 37.0 6 32.81803435093184 35.0 33.0 37.0 17.0 37.0 7 32.2801453222718 35.0 32.0 35.0 25.0 37.0 8 32.97491045833268 35.0 32.0 36.0 27.0 37.0 9 33.0678528098097 35.0 31.0 37.0 25.0 39.0 10 32.10728019000932 35.0 28.0 39.0 15.0 39.0 11 32.77659381933474 37.0 30.0 39.0 17.0 39.0 12 33.51972374468504 37.0 31.0 39.0 25.0 39.0 13 33.65528860011127 35.0 32.0 39.0 25.0 39.0 14 33.828220762941925 37.0 32.0 40.0 21.0 41.0 15 34.37197273196487 37.0 32.0 40.0 25.0 41.0 16 34.560525251532205 37.0 32.0 40.0 25.0 41.0 17 32.607408665264984 36.0 29.0 40.0 18.0 41.0 18 33.24869457968482 36.0 30.0 39.0 23.0 39.0 19 32.998395735068385 36.0 31.0 37.0 22.0 39.0 20 32.4680118956915 34.0 31.0 36.0 24.0 39.0 21 32.7939681426053 35.0 31.0 37.0 24.0 39.0 22 32.89912793230806 34.0 31.0 37.0 25.0 39.0 23 33.907790516068346 35.0 32.0 38.0 27.0 40.0 24 32.14057427322106 35.0 31.0 37.0 21.0 39.0 25 31.34126155998007 34.0 29.0 37.0 18.0 39.0 26 30.462414843249018 33.0 25.0 37.0 18.0 39.0 27 32.315792178426435 34.0 30.0 37.0 22.0 39.0 28 32.33784076665095 35.0 31.0 37.0 21.0 39.0 29 32.39824648033658 35.0 31.0 38.0 21.0 40.0 30 31.44495114588756 34.0 29.0 37.0 18.0 40.0 31 31.784431927106493 35.0 30.0 37.0 20.0 40.0 32 31.465701575441788 35.0 30.0 37.0 17.0 40.0 33 31.136972497357878 35.0 30.0 38.0 15.0 40.0 34 30.017043639134233 35.0 25.0 38.0 8.0 40.0 35 29.32503569377755 35.0 23.0 38.0 7.0 40.0 36 28.68637514327784 34.0 21.0 38.0 7.0 40.0 37 28.655858359940744 34.0 21.0 38.0 7.0 40.0 38 28.689429502834276 34.0 21.0 38.0 7.0 40.0 39 28.239332643663264 34.0 19.0 38.0 7.0 40.0 40 28.000507197965845 33.0 18.0 38.0 7.0 40.0 41 27.689371409675193 33.0 18.0 37.0 7.0 40.0 42 27.923069016907345 33.0 18.0 38.0 7.0 40.0 43 27.93385423532645 33.0 18.0 38.0 7.0 40.0 44 27.871283434288816 33.0 18.0 38.0 7.0 40.0 45 28.151565052049236 34.0 18.0 38.0 7.0 40.0 46 27.85592673112028 34.0 18.0 38.0 7.0 40.0 47 27.85002580676875 34.0 18.0 38.0 7.0 40.0 48 27.631351984216536 33.0 18.0 37.0 7.0 40.0 49 27.44011153886544 33.0 18.0 37.0 7.0 39.0 50 27.596578759800426 33.0 18.0 37.0 7.0 40.0 51 26.066494323628053 31.0 15.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 14.0 10 18.0 11 28.0 12 36.0 13 52.0 14 112.0 15 253.0 16 533.0 17 980.0 18 1703.0 19 2899.0 20 4184.0 21 6296.0 22 8664.0 23 11802.0 24 16115.0 25 22010.0 26 26696.0 27 27060.0 28 25014.0 29 24647.0 30 26825.0 31 29596.0 32 33947.0 33 38055.0 34 42096.0 35 44485.0 36 32431.0 37 17382.0 38 3568.0 39 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.49715008367649 2.390310061064848 33.6949260094245 42.41761384583416 2 43.59980963318639 11.215107796325384 32.18495074370416 13.000131826784076 3 11.715602705353731 11.251080867911798 63.88080177496944 13.152514651765026 4 10.67193675889328 2.684127384891757 71.22355364791524 15.420382208299724 5 17.562232296668356 3.1620553359683794 63.67568823635872 15.600024131004542 6 12.997450604057137 10.100389447601088 65.85753323040417 11.044626717937604 7 49.9581058948916 1.0966200953174678 46.28661824080508 2.6586557689858497 8 50.90904622204546 7.516137609287756 38.32025864861906 3.254557520047726 9 46.87201853618645 2.750264212156217 38.49565530200623 11.882061949651106 10 24.828345886669183 18.24259256362877 44.84791881257583 12.081142737126221 11 20.30311222928029 15.834631119611581 51.270564419727535 12.591692231380582 12 16.65843680246315 14.152387293685498 53.266958175159814 15.92221772869154 13 15.539473184421201 15.041436062892547 57.82615398708991 11.592936765596336 14 14.4636325652375 17.274671159204303 52.70300766159394 15.558688613964256 15 11.945294118961383 15.229791959459913 58.4111074120168 14.41380650956191 16 13.481187871042124 15.346425148081696 51.5391335628758 19.633253418000386 17 14.063236638014823 16.032371295723227 54.73470418293089 15.169687883331061 18 14.027487001655656 14.694217719754132 54.392401414791856 16.885893863798355 19 14.185455707317725 17.971565632980827 50.964234723174926 16.878743936526522 20 15.706379299173065 16.82333200016981 55.10069108515787 12.369597615499254 21 16.00086692868171 19.61247394186662 51.17225291973983 13.214406209711834 22 14.427882928878333 14.885254839048434 53.573287871712424 17.113574360360804 23 14.075078705058797 19.863168266835284 52.01125219804405 14.050500830061868 24 14.573115826587452 16.225642767289976 52.062642300310344 17.138599105812222 25 13.355617273330548 20.59536550651649 49.9665964335269 16.082420786626063 26 13.991067059614753 16.56347683088411 52.7047951434119 16.740660966089234 27 14.467654399327905 18.287056173850484 50.41167940619854 16.833610020623073 28 12.572700237064776 17.613398963707418 53.64456370920352 16.16933709002429 29 17.046990662641853 16.273011035465874 50.478263103917485 16.201735197974784 30 13.868177684630115 19.854230857745495 51.862220901471765 14.415370556152624 31 16.097390946851462 17.39108091259884 48.48008186666726 18.03144627388243 32 16.742001577452704 21.463634799589773 47.40446468271081 14.389898940246718 33 15.454567798068178 18.199246129543276 46.62780383280789 19.718382239580656 34 20.683845856505428 20.620390251967905 42.82538313555592 15.870380755970748 35 15.375918598078009 25.78397835359518 41.04907307895977 17.79102996936703 36 20.053088209993362 20.992856775784986 39.146522118970324 19.80753289525133 37 16.578446991109512 26.934222903451406 40.09098282453408 16.396347280905 38 17.644009589839953 22.663928840348827 41.03991223464274 18.65214933516848 39 21.228580940528246 23.458687943658575 38.5763154190416 16.736415696771584 40 18.405476844290224 24.357344427637152 40.91925721193055 16.31792151614208 41 22.01730729270238 23.133142817562902 37.41043040327824 17.439119486456473 42 17.451855294409427 24.612730892377954 40.24872809496891 17.686685718243712 43 21.261649354160475 21.17942519053439 38.20630668272421 19.352618772580925 44 19.87456346342477 22.646500892623735 37.992702605478186 19.486233038473312 45 17.202948451258724 21.873415006356733 38.72534671561388 22.19828982677067 46 20.43114061449156 23.854615166336355 36.949036659017736 18.765207560154348 47 16.599896772925014 21.441514712092538 43.36721356162455 18.5913749533579 48 19.296983400996968 23.148559848242794 37.01539692150944 20.5390598292508 49 16.705805070639045 21.980217044979746 40.55237656879459 20.761601315586617 50 18.829333470373605 20.582629698563533 39.26851775304598 21.319519078016878 51 18.49194627723396 20.60854818492393 37.867355442993855 23.03215009484825 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 70.0 1 383.5 2 697.0 3 20770.5 4 40844.0 5 28386.0 6 15928.0 7 15011.0 8 14094.0 9 13770.0 10 13446.0 11 12828.5 12 12211.0 13 11525.5 14 10840.0 15 10148.0 16 9456.0 17 8830.5 18 8205.0 19 7528.0 20 6851.0 21 6425.5 22 6000.0 23 5749.0 24 5498.0 25 5353.5 26 5194.0 27 5179.0 28 5377.5 29 5576.0 30 6035.5 31 6495.0 32 7135.0 33 7775.0 34 8724.0 35 9673.0 36 10382.0 37 11091.0 38 11988.0 39 12885.0 40 13559.0 41 14233.0 42 15010.5 43 15788.0 44 17567.5 45 19347.0 46 32531.5 47 45716.0 48 37647.5 49 29579.0 50 27524.0 51 25469.0 52 22324.0 53 19179.0 54 17560.0 55 15941.0 56 14566.5 57 13192.0 58 12148.0 59 11104.0 60 9736.0 61 8368.0 62 7524.0 63 6680.0 64 5709.5 65 4739.0 66 4012.5 67 3286.0 68 2846.0 69 2406.0 70 2040.5 71 1675.0 72 1422.5 73 1170.0 74 942.0 75 596.0 76 478.0 77 354.5 78 231.0 79 181.5 80 132.0 81 95.5 82 59.0 83 45.5 84 32.0 85 19.5 86 7.0 87 6.0 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 447557.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.928561285983285 #Duplication Level Percentage of deduplicated Percentage of total 1 82.08377623910663 41.8040862877828 2 7.021819458041207 7.1522232521592315 3 3.145489883972835 4.8058582299105295 4 1.9709270122356213 4.015059085313671 5 1.3996820988169072 3.564189777524528 6 1.0145166099607166 3.1000722807619416 7 0.7891519494449069 2.8133261394880686 8 0.5912292962966392 2.408836596040973 9 0.4309030536681589 1.975074531935056 >10 1.4630950130742286 10.74905225081524 >50 0.05051630274100384 1.7881560582427771 >100 0.033528519518255195 3.3825610589822572 >500 0.0017881877076402772 0.6336183231572742 >1k 0.0022352346345503463 2.4484123058689637 >5k 8.940938538201386E-4 3.2965000722221243 >10k+ 4.470469269100693E-4 6.062973749794542 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26630 5.950080101528967 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 8526 1.9050087474891466 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 5953 1.3301099077882816 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 4858 1.085448333955228 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 1630 0.36419942040902054 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT 1581 0.35325109427402546 No Hit GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT 1506 0.33649345223066557 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 1179 0.26343013292161666 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA 860 0.19215429543052615 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 718 0.16042649316176488 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCGACATGAGTCGTATGCCG 687 0.15350000111717613 No Hit GAATCTTTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 518 0.1157394477128053 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 465 0.103897380668831 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09272561930659111 0.0 2 0.0 0.0 0.0 0.6224905431040069 0.0 3 0.0 0.0 0.0 0.7771077203574069 0.0 4 0.0 0.0 0.0 1.3540174771034752 0.0 5 0.0 0.0 0.0 2.8293602826008755 0.0 6 0.0 0.0 0.0 3.175908320057557 0.0 7 0.0 0.0 0.0 3.553066983646776 0.0 8 0.0 0.0 0.0 4.080597555171743 0.0 9 0.0 0.0 0.0 4.260686348331051 0.0 10 0.0 0.0 0.0 6.804719845740319 0.0 11 0.0 0.0 0.0 7.277061916135822 0.0 12 0.0 0.0 0.0 9.184751886351906 0.0 13 2.2343522724479787E-4 0.0 0.0 9.398132528370688 0.0 14 2.2343522724479787E-4 0.0 0.0 9.539120156762156 0.0 15 2.2343522724479787E-4 0.0 0.0 9.902649271489441 0.0 16 2.2343522724479787E-4 0.0 0.0 10.140607788505152 0.0 17 2.2343522724479787E-4 0.0 0.0 10.377672564611881 0.0 18 2.2343522724479787E-4 0.0 0.0 10.621216962308711 0.0 19 2.2343522724479787E-4 0.0 0.0 11.240355977004047 0.0 20 2.2343522724479787E-4 0.0 0.0 11.480548846292205 0.0 21 2.2343522724479787E-4 0.0 0.0 11.7383930985327 0.0 22 2.2343522724479787E-4 0.0 0.0 12.089186405307034 0.0 23 2.2343522724479787E-4 0.0 0.0 12.36937418027201 0.0 24 2.2343522724479787E-4 0.0 0.0 12.58409543365426 0.0 25 2.2343522724479787E-4 0.0 0.0 12.780718433629684 0.0 26 2.2343522724479787E-4 0.0 0.0 12.95611508701685 0.0 27 2.2343522724479787E-4 0.0 0.0 13.145811594947682 0.0 28 2.2343522724479787E-4 0.0 0.0 13.330815963106375 0.0 29 2.2343522724479787E-4 0.0 0.0 13.527215527854553 0.0 30 2.2343522724479787E-4 0.0 0.0 13.764727174415773 0.0 31 2.2343522724479787E-4 0.0 0.0 13.968276666435784 0.0 32 2.2343522724479787E-4 0.0 0.0 14.17070898231957 0.0 33 2.2343522724479787E-4 0.0 0.0 14.37738656752101 0.0 34 4.4687045448959573E-4 0.0 0.0 14.585404764085915 0.0 35 4.4687045448959573E-4 0.0 0.0 14.813979001557344 0.0 36 4.4687045448959573E-4 0.0 0.0 15.010378566305521 0.0 37 4.4687045448959573E-4 0.0 0.0 15.22733417196022 0.0 38 4.4687045448959573E-4 0.0 0.0 15.463058336703481 0.0 39 4.4687045448959573E-4 0.0 0.0 15.757545966212126 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14950 0.0 44.593647 1 GATACCT 1060 0.0 42.0283 5 TACGGCT 800 0.0 41.90625 7 CCGATGA 145 0.0 41.89655 18 CGATGAA 140 0.0 41.785717 19 TTGTTCG 60 3.6379788E-12 41.249996 1 TGATACC 1085 0.0 40.852535 4 GAATGAT 3105 0.0 40.57971 1 CGGCTGT 790 0.0 40.443035 9 ACGGCTG 830 0.0 40.391567 8 GTTTTTT 16745 0.0 40.20305 2 ATGATAC 3015 0.0 40.0 3 AATGATA 2970 0.0 39.772728 2 ATACGGC 1925 0.0 39.62338 6 TGCGGGA 375 0.0 39.600002 4 ATACCTG 1125 0.0 39.6 6 CGACCAC 685 0.0 39.416058 12 ATGGGCG 40 3.4519144E-7 39.375 5 TCGTGCG 40 3.4519144E-7 39.375 1 CACCGGT 115 0.0 39.130436 16 >>END_MODULE