##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933412.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 985671 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.502275099906562 31.0 28.0 33.0 25.0 34.0 2 28.78233203574012 31.0 28.0 33.0 16.0 34.0 3 28.77497258212933 31.0 28.0 34.0 16.0 34.0 4 33.1947424647778 35.0 32.0 37.0 28.0 37.0 5 34.293421435752904 35.0 33.0 37.0 30.0 37.0 6 33.7720902816457 35.0 33.0 37.0 28.0 37.0 7 33.72727005258347 35.0 33.0 37.0 29.0 37.0 8 33.649966368088336 35.0 33.0 37.0 28.0 37.0 9 34.86671820516176 37.0 34.0 39.0 28.0 39.0 10 34.79606176908928 37.0 33.0 39.0 28.0 39.0 11 35.126375839402805 37.0 34.0 39.0 28.0 39.0 12 35.28245124387346 37.0 34.0 39.0 30.0 39.0 13 35.47588698460237 37.0 34.0 39.0 30.0 39.0 14 36.22166422670445 38.0 34.0 40.0 30.0 41.0 15 36.59151177218362 38.0 35.0 40.0 30.0 41.0 16 36.50668935172081 38.0 34.0 41.0 30.0 41.0 17 35.74569912272959 38.0 33.0 40.0 27.0 41.0 18 35.48947163911691 38.0 34.0 39.0 27.0 40.0 19 34.781413879479054 37.0 33.0 38.0 27.0 40.0 20 33.99724248760489 35.0 33.0 38.0 27.0 40.0 21 34.31803715438519 35.0 33.0 38.0 27.0 40.0 22 34.754469797731694 35.0 33.0 39.0 29.0 40.0 23 35.076545825128264 35.0 33.0 39.0 30.0 40.0 24 34.50559263689406 35.0 33.0 38.0 27.0 40.0 25 33.528022027633966 35.0 33.0 38.0 24.0 40.0 26 33.49315745314613 35.0 32.0 38.0 24.0 40.0 27 34.28252429055943 35.0 33.0 38.0 26.0 40.0 28 33.989566498354925 35.0 33.0 39.0 24.0 40.0 29 33.98952794593733 35.0 33.0 39.0 24.0 40.0 30 33.16564350579453 35.0 33.0 39.0 21.0 40.0 31 33.05255404693858 35.0 33.0 39.0 21.0 40.0 32 32.26004214387965 35.0 31.0 39.0 15.0 40.0 33 31.384772403773674 35.0 30.0 39.0 10.0 40.0 34 30.671217881017093 35.0 25.0 39.0 8.0 40.0 35 30.148244191013024 35.0 22.0 40.0 7.0 41.0 36 29.446330469294523 35.0 20.0 40.0 7.0 41.0 37 29.421981573973465 35.0 18.0 40.0 7.0 41.0 38 29.1601264519297 35.0 18.0 39.0 7.0 40.0 39 28.85469593809699 35.0 18.0 39.0 7.0 40.0 40 28.632378349368096 35.0 18.0 39.0 7.0 40.0 41 28.274297407552826 35.0 17.0 39.0 7.0 40.0 42 28.458176206868213 35.0 17.0 39.0 7.0 40.0 43 28.294810337323508 35.0 15.0 39.0 7.0 40.0 44 28.369266215603382 35.0 15.0 39.0 7.0 40.0 45 28.510673439717714 35.0 17.0 39.0 7.0 40.0 46 28.3342920710866 35.0 17.0 39.0 7.0 40.0 47 28.229511672758964 35.0 15.0 39.0 7.0 40.0 48 28.06949986354473 35.0 15.0 38.0 7.0 40.0 49 28.20258077999657 35.0 15.0 39.0 7.0 40.0 50 28.175398281982527 35.0 15.0 39.0 7.0 40.0 51 27.09101718524741 33.0 15.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 47.0 10 57.0 11 56.0 12 71.0 13 133.0 14 191.0 15 278.0 16 570.0 17 1202.0 18 2326.0 19 4332.0 20 7111.0 21 10505.0 22 15448.0 23 22576.0 24 33057.0 25 47355.0 26 58357.0 27 56326.0 28 47573.0 29 40532.0 30 39803.0 31 43545.0 32 49913.0 33 59636.0 34 69129.0 35 82728.0 36 95073.0 37 102787.0 38 82637.0 39 12304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.298502238576564 2.383046675817793 30.02807224723057 42.29037883837508 2 41.47702428092132 14.960468553908962 30.5825168844371 12.979990280732617 3 11.413950496666738 15.19969645043833 60.1844834635492 13.201869589345735 4 10.077804865923824 2.650478709427385 72.38520764027754 14.886508784371255 5 19.36832878313352 3.150036878431038 61.588197278808046 15.893437059627402 6 12.33616490695171 13.081849826159035 64.71185618730793 9.87012907958132 7 49.649730995433565 1.0633365494165903 47.05637073628016 2.2305617188696836 8 48.8615369631449 9.54182480766909 38.621913397066564 2.9747248321194393 9 45.85191204773195 2.6082739575375555 37.84812579450953 13.691688200220966 10 25.84422185495972 14.876667772512327 46.240987104216316 13.038123268311638 11 21.851307383498145 15.838347683963514 48.83647789171032 13.473867040828026 12 15.110315713863956 14.430271358292982 53.31210921291182 17.14730371493125 13 15.71325523425159 14.947178115212886 58.39128877688397 10.948277873651554 14 14.274945696890748 20.22398954620761 51.34542864708407 14.155636109817577 15 11.744791111841577 15.4919846480215 59.112929161961745 13.650295078175173 16 13.107517619976644 16.804998828209413 50.66781918104519 19.419664370768746 17 13.793344838186371 17.42508402905229 54.49769750758621 14.283873625175133 18 14.099430743118141 15.974498590300415 53.14460910384905 16.781461562732392 19 13.835752497537209 18.182537580998122 50.44320062170846 17.538509299756207 20 15.80304178574798 17.449737285564858 55.08521606093717 11.662004867749989 21 15.781837956072565 20.972312262408042 51.33508036657262 11.910769414946772 22 14.083705414889957 14.300714944438864 53.86665530384885 17.748924336822327 23 14.145287829306127 20.459463654708316 52.499059016649575 12.896189499335986 24 15.349949425315343 16.836145123474264 50.826188454362565 16.987716996847833 25 12.854492016098678 23.7513328483845 49.04993654069157 14.344238594825251 26 13.580089096666129 15.79675165445671 53.567671160052384 17.05548808882477 27 16.63425219977051 17.710879187883176 49.52271092484206 16.132157687504247 28 12.201028537919854 17.982572278173954 53.72908404528489 16.087315138621307 29 16.411053992660836 15.698341535867444 51.98265952838219 15.90794494308953 30 16.161173454428507 19.150913438662595 50.75385194451293 13.934061162395972 31 15.672775195780336 16.04541474792299 47.72200866211951 20.559801394177164 32 17.307093340475678 19.210771139660192 46.5889733998464 16.893162120017735 33 15.427561529151207 17.420822972371106 46.041833431236185 21.109782067241504 34 17.507768819413375 19.690850192407 46.69763034521661 16.103750642963018 35 20.486145985830973 21.04809819909483 40.039120558482495 18.4266352565917 36 16.7563010375673 20.90870077338179 42.33065596938532 20.00434221966559 37 19.24810611248581 22.258542657742797 39.43506504705931 19.05828618271208 38 19.06234433193226 22.609674019018517 38.27189802682639 20.056083622222832 39 19.40728701564721 21.656516220929703 39.4648924438276 19.471304319595482 40 21.59442653786101 22.022764188050576 39.596173571100294 16.786635702988118 41 18.46508622045287 24.003039553765912 39.7554559279922 17.776418297789018 42 20.322501118527377 22.884207813763418 39.189749926699676 17.603541141009526 43 20.01641521359561 21.492364084973588 38.75948465563053 19.73173604580027 44 21.162132192181772 22.47707399324927 35.89757637183198 20.463217442736976 45 18.377125836105556 21.904164777090937 36.335653580149966 23.383055806653537 46 21.996487671849938 23.449203638942407 34.92463509629481 19.629673592912848 47 16.96529572240636 21.654690053780623 42.66991724419203 18.71009697962099 48 19.284528001736888 23.669053872945437 35.231532631070614 21.814885494247065 49 18.66839949638368 21.47633439555389 39.3170743584827 20.538191749579727 50 18.968803992407203 21.055098506499633 38.05722193307909 21.918875568014073 51 18.860349954498002 21.44336193313996 35.66149354094825 24.03479457141379 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 1235.5 2 2391.0 3 30772.5 4 59154.0 5 45293.0 6 31432.0 7 30388.5 8 29345.0 9 29061.0 10 28777.0 11 28232.5 12 27688.0 13 26757.5 14 25827.0 15 24553.0 16 23279.0 17 21988.0 18 20697.0 19 19480.5 20 18264.0 21 17139.5 22 16015.0 23 15262.0 24 14509.0 25 13996.0 26 13825.0 27 14167.0 28 14351.0 29 14535.0 30 15721.5 31 16908.0 32 17871.5 33 18835.0 34 20830.0 35 22825.0 36 24186.0 37 25547.0 38 26899.5 39 28252.0 40 29761.0 41 31270.0 42 33553.5 43 35837.0 44 39114.5 45 42392.0 46 88613.5 47 134835.0 48 97276.5 49 59718.0 50 55732.5 51 51747.0 52 46058.5 53 40370.0 54 37207.5 55 34045.0 56 31506.5 57 28968.0 58 25970.5 59 22973.0 60 20005.5 61 17038.0 62 14435.5 63 11833.0 64 10018.5 65 8204.0 66 6631.5 67 5059.0 68 4243.0 69 3427.0 70 2849.5 71 2272.0 72 1845.5 73 1419.0 74 1214.0 75 823.5 76 638.0 77 481.5 78 325.0 79 233.5 80 142.0 81 107.0 82 72.0 83 58.0 84 44.0 85 25.5 86 7.0 87 8.5 88 10.0 89 7.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 985671.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.78974105638283 #Duplication Level Percentage of deduplicated Percentage of total 1 83.23380293295236 38.944880863708384 2 5.3402266487366825 4.99735644153569 3 2.486294607542159 3.4899924263033575 4 1.6794924555468165 3.1433206840473633 5 1.3188645138754023 3.0854664546341146 6 1.0823392051882914 3.0385422687558816 7 0.9141642181737797 2.994145493595327 8 0.7458372561824459 2.791802566958377 9 0.6303733952116667 2.6545507137708086 >10 2.478831805730803 16.495443117500646 >50 0.04960638615851403 1.6287418222954901 >100 0.034679337729266076 3.1066314073741075 >500 0.0028533632252977052 0.8915261890194932 >1k 0.00153642635208338 2.5517510907231133 >5k 2.1948947886905429E-4 0.6057160998545065 >10k+ 8.779579154762171E-4 9.580132359923327 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28257 2.8667780628627604 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCG 23283 2.3621472073338876 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTC 22714 2.304420034676885 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGC 19030 1.9306644914986848 No Hit GAACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCT 5898 0.5983741025149365 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCCTTGTT 4878 0.49489129740045107 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTC 4640 0.47074530954040444 No Hit GCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 4278 0.4340190590978126 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCT 3787 0.38420527742015337 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTA 3640 0.3692915790360069 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTT 2015 0.204429266966361 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGT 1609 0.1632390523815756 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0145373050439751E-4 0.0 0.0 0.05945188607557694 0.0 2 1.0145373050439751E-4 0.0 0.0 0.5602274998452831 0.0 3 1.0145373050439751E-4 0.0 0.0 0.6498111438806661 0.0 4 1.0145373050439751E-4 0.0 0.0 1.369219546887349 0.0 5 1.0145373050439751E-4 0.0 0.0 4.156153523843148 0.0 6 1.0145373050439751E-4 0.0 0.0 4.4601089004343235 0.0 7 1.0145373050439751E-4 0.0 0.0 4.960985967934534 0.0 8 1.0145373050439751E-4 0.0 0.0 5.571128703187981 0.0 9 1.0145373050439751E-4 0.0 0.0 5.670756266543299 0.0 10 1.0145373050439751E-4 0.0 0.0 8.525461335476036 0.0 11 1.0145373050439751E-4 0.0 0.0 8.666684928338157 0.0 12 1.0145373050439751E-4 0.0 0.0 11.027208875983975 0.0 13 1.0145373050439751E-4 0.0 0.0 11.207695062551297 0.0 14 1.0145373050439751E-4 0.0 0.0 11.359165482194364 0.0 15 1.0145373050439751E-4 0.0 0.0 11.845636119962949 0.0 16 1.0145373050439751E-4 0.0 0.0 12.102009696947562 0.0 17 1.0145373050439751E-4 0.0 0.0 12.224870164588387 0.0 18 1.0145373050439751E-4 0.0 0.0 12.32713552493682 0.0 19 1.0145373050439751E-4 0.0 0.0 13.026557543034135 0.0 20 1.0145373050439751E-4 0.0 0.0 13.166462237399701 0.0 21 1.0145373050439751E-4 0.0 0.0 13.26010403065526 0.0 22 1.0145373050439751E-4 0.0 0.0 13.477722282587193 0.0 23 1.0145373050439751E-4 0.0 0.0 13.585364690652357 0.0 24 1.0145373050439751E-4 0.0 0.0 13.684586439085658 0.0 25 1.0145373050439751E-4 0.0 0.0 13.760169468311435 0.0 26 1.0145373050439751E-4 0.0 0.0 13.876435443469473 0.0 27 1.0145373050439751E-4 0.0 0.0 14.025065158658416 0.0 28 1.0145373050439751E-4 0.0 0.0 14.113329904197242 0.0 29 1.0145373050439751E-4 0.0 0.0 14.214276366049118 0.0 30 1.0145373050439751E-4 0.0 0.0 14.329324896441104 0.0 31 1.0145373050439751E-4 0.0 0.0 14.432604794094582 0.0 32 1.0145373050439751E-4 0.0 0.0 14.555668169196416 0.0 33 1.0145373050439751E-4 0.0 0.0 14.671021060779916 0.0 34 1.0145373050439751E-4 0.0 0.0 14.833245575856447 0.0 35 1.0145373050439751E-4 0.0 0.0 14.968483398618808 0.0 36 1.0145373050439751E-4 0.0 0.0 15.091546773720642 0.0 37 1.0145373050439751E-4 0.0 0.0 15.231350014355703 0.0 38 1.0145373050439751E-4 0.0 0.0 15.375211404210939 0.0 39 1.0145373050439751E-4 0.0 0.0 15.575988336879142 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAGCGT 25 3.8903996E-5 45.0 44 CGTTTTT 29345 0.0 44.486282 1 CCGATGA 725 0.0 42.827583 18 GATACCT 2735 0.0 42.367462 5 CGATGAA 705 0.0 42.127663 19 TGATACC 2765 0.0 41.8264 4 ACGGCTG 2315 0.0 41.695465 8 TACGGCT 2310 0.0 41.68831 7 CGGCTGT 2360 0.0 41.472458 9 ATACCTG 2815 0.0 41.16341 6 CGACCAC 2245 0.0 40.389755 12 ATGATAC 8865 0.0 40.02538 3 GAATGAT 9270 0.0 39.660194 1 GCGACCA 2330 0.0 39.592274 11 ATACGGC 6155 0.0 39.406986 6 AATGATA 8810 0.0 39.381382 2 GCGATCG 40 3.4575532E-7 39.375004 9 GAATCTG 2985 0.0 39.346733 1 TACCTGT 2965 0.0 39.3086 7 ACCACCG 1420 0.0 39.137325 14 >>END_MODULE