##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933411.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 664216 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.736368892047164 31.0 28.0 31.0 16.0 33.0 2 29.110019933274717 31.0 30.0 33.0 16.0 34.0 3 29.270890794560806 31.0 30.0 33.0 16.0 34.0 4 32.271187384826625 35.0 32.0 37.0 19.0 37.0 5 33.73055000180664 35.0 33.0 37.0 28.0 37.0 6 33.01011417972467 35.0 33.0 37.0 25.0 37.0 7 32.28062407409638 35.0 32.0 35.0 25.0 37.0 8 33.1458019680345 35.0 33.0 37.0 28.0 37.0 9 33.14945439435365 35.0 31.0 37.0 25.0 39.0 10 32.19667246799234 35.0 28.0 39.0 15.0 39.0 11 32.831509629397665 37.0 30.0 39.0 17.0 39.0 12 33.6271197923567 37.0 31.0 39.0 25.0 39.0 13 33.84190082744168 37.0 32.0 39.0 26.0 39.0 14 33.90804196225324 37.0 32.0 40.0 21.0 41.0 15 34.61792850518506 37.0 32.0 40.0 25.0 41.0 16 34.7852791862888 37.0 32.0 40.0 25.0 41.0 17 32.83546617365435 36.0 30.0 40.0 18.0 41.0 18 33.432360858515906 36.0 31.0 39.0 24.0 39.0 19 33.16771050381201 37.0 32.0 37.0 23.0 39.0 20 32.63734688715719 35.0 31.0 36.0 25.0 39.0 21 32.86822208438219 35.0 32.0 37.0 24.0 39.0 22 32.876496501138185 34.0 30.0 37.0 25.0 39.0 23 33.9331738470618 35.0 33.0 38.0 27.0 40.0 24 32.13615600949089 35.0 31.0 37.0 21.0 39.0 25 31.350172233128983 34.0 29.0 37.0 18.0 39.0 26 30.34058348489046 33.0 25.0 37.0 18.0 39.0 27 32.251588338733185 34.0 30.0 37.0 22.0 39.0 28 32.295708022691414 35.0 31.0 37.0 21.0 39.0 29 32.40757976320956 35.0 31.0 38.0 21.0 40.0 30 31.39666162814506 35.0 29.0 37.0 18.0 40.0 31 31.67011183109109 35.0 30.0 37.0 18.0 40.0 32 31.350024690763245 35.0 30.0 37.0 16.0 40.0 33 30.901768400640755 35.0 29.0 38.0 12.0 40.0 34 29.72752839437773 35.0 24.0 38.0 8.0 40.0 35 29.05711093981476 35.0 22.0 38.0 7.0 40.0 36 28.342766509689618 34.0 19.0 38.0 7.0 40.0 37 28.453427800594987 34.0 18.0 38.0 7.0 40.0 38 28.386752201091213 34.0 18.0 38.0 7.0 40.0 39 28.027750009033205 34.0 18.0 38.0 7.0 40.0 40 27.829221217194405 33.0 18.0 38.0 7.0 40.0 41 27.43114438676575 33.0 17.0 38.0 7.0 40.0 42 27.81889776819589 33.0 18.0 38.0 7.0 40.0 43 27.70856167270888 33.0 16.0 38.0 7.0 40.0 44 27.681907692678287 34.0 16.0 38.0 7.0 40.0 45 27.92877768677659 34.0 17.0 38.0 7.0 40.0 46 27.713421537572113 34.0 17.0 38.0 7.0 40.0 47 27.7263977380852 34.0 15.0 38.0 7.0 40.0 48 27.46604116733111 33.0 15.0 38.0 7.0 40.0 49 27.25196622785359 33.0 15.0 37.0 7.0 40.0 50 27.408556854998977 33.0 15.0 38.0 7.0 40.0 51 26.072723330964624 31.0 15.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 19.0 10 26.0 11 48.0 12 63.0 13 72.0 14 174.0 15 360.0 16 709.0 17 1468.0 18 2632.0 19 4378.0 20 6781.0 21 9777.0 22 13427.0 23 18589.0 24 25632.0 25 34389.0 26 41054.0 27 40384.0 28 35840.0 29 34195.0 30 36563.0 31 41766.0 32 48007.0 33 54935.0 34 61877.0 35 65239.0 36 51235.0 37 28435.0 38 6018.0 39 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.614378455201322 2.4547737482987464 32.466396473436355 44.46445132306358 2 45.07825767521409 9.8475495923013 32.30274489021643 12.771447842268177 3 12.198592024281258 9.885187950907536 64.88461584785672 13.031604176954485 4 10.649397184048562 2.773344815541932 71.12114131547568 15.456116684933816 5 16.44284389415491 3.222596263865971 64.8295132908572 15.505046551121923 6 12.682771869391885 9.045099786816337 67.24830476832837 11.023823575463403 7 50.43178724993075 1.1377323039493177 46.05083286159924 2.3796475845206984 8 51.452238428463026 6.414931287412529 39.14554903826466 2.9872812458597804 9 47.583316270610766 2.62655521697761 39.25108699579655 10.539041516615077 10 24.358341262480877 16.000216796945573 46.961681139870166 12.679760800703384 11 20.189065002950848 16.37253544027846 50.7030845387645 12.73531501800619 12 15.070097679068256 14.934298481216954 54.573813337829854 15.42179050188493 13 15.0860563431173 15.239921953099595 58.4443915834608 11.229630120322305 14 13.991833981716791 17.441916484998856 54.0381442181459 14.528105315138449 15 11.984354487094558 15.733135004275717 58.81339805123634 13.46911245739338 16 13.370801064713888 15.413510062991556 53.098088573596534 18.117600298698015 17 14.096016958338852 15.915154106495477 55.62588073759138 14.362948197574282 18 14.123116576535343 14.691154684620667 54.90036373709757 16.285365001746417 19 14.283305430763487 17.20072988305009 52.32650222216869 16.18946246401773 20 15.717477447095524 16.72769099208691 55.5951678369687 11.959663723848868 21 16.21987425777157 18.636256880291953 52.45296710708565 12.690901754850831 22 14.399081021836272 14.748063882833296 54.559962421862764 16.29289267346767 23 13.976176424536597 19.26828019800788 53.21010032880869 13.545443048646828 24 14.35828104110711 16.411528779794523 53.03470557770363 16.19548460139473 25 13.287093355173617 19.751556722511953 51.36506798993099 15.596281932383441 26 13.442313946065736 16.66280246184976 54.37749165933974 15.51739193274477 27 14.811446878726198 17.228883375287555 52.1822720319896 15.777397713996653 28 12.433605935418598 17.433334939236634 54.76516675298397 15.367892372360798 29 15.498572753441653 15.737802160742891 53.207390366989046 15.556234718826406 30 14.964258614667516 17.6654883351199 52.96334324978621 14.406909800426368 31 15.052633480674963 16.187204162501356 50.67688824117455 18.083274115649125 32 15.996302407650523 18.41449167138401 49.83830561142761 15.75090030953786 33 14.896359015741867 17.276909920869116 48.65164344129018 19.175087622098836 34 16.391354619581584 19.55839666614475 47.767443120912475 16.282805593361196 35 17.98481216953521 21.09434280414805 42.71065436544739 18.210190660869355 36 16.669878473267733 20.443500307129007 43.19874859985306 19.687872619750202 37 18.275681404844207 21.980951979476558 40.902658171438205 18.84070844424103 38 18.249635660688693 22.144754116130898 40.98094595733917 18.624664265841233 39 18.31768581304877 21.360220169342504 41.6238091223337 18.69828489527503 40 20.703807195249738 21.37617883339155 41.287322196393944 16.63269177496477 41 18.154786997000976 22.520384935021138 41.899773567634625 17.42505450034326 42 19.392185674539608 22.415449191226948 40.7239512447758 17.468413889457647 43 18.817222108470737 21.262360436966286 41.03936068989606 18.881056764666916 44 19.98882893516567 22.30795403904754 38.381490358558054 19.321726667228734 45 18.01100846712515 21.798180110084672 38.580371445433414 21.610439977356762 46 19.78242017656907 22.67906825490503 37.727937899719365 19.810573668806533 47 17.11732328037867 21.265371505654787 42.86783215098703 18.74947306297951 48 18.454087224637767 22.457905259734783 38.39353463331206 20.69447288231539 49 18.006040203789127 21.231045322605897 40.045708022691414 20.717206450913558 50 17.987672684789285 20.66586772977465 39.95537596203644 21.391083623399616 51 18.341924915991186 20.970587881050744 38.27926457658352 22.408222626374553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 78.0 1 461.0 2 844.0 3 27626.5 4 54409.0 5 38580.5 6 22752.0 7 21845.0 8 20938.0 9 20764.0 10 20590.0 11 19994.5 12 19399.0 13 18533.5 14 17668.0 15 16743.0 16 15818.0 17 14793.5 18 13769.0 19 12774.5 20 11780.0 21 10997.0 22 10214.0 23 9585.0 24 8956.0 25 8689.5 26 8663.0 27 8903.0 28 9028.5 29 9154.0 30 10092.0 31 11030.0 32 11757.0 33 12484.0 34 13792.5 35 15101.0 36 16295.0 37 17489.0 38 18558.0 39 19627.0 40 20651.5 41 21676.0 42 23305.5 43 24935.0 44 26712.0 45 28489.0 46 45487.5 47 62486.0 48 53114.0 49 43742.0 50 40890.0 51 38038.0 52 33590.0 53 29142.0 54 26190.0 55 23238.0 56 21352.0 57 19466.0 58 17398.0 59 15330.0 60 13620.5 61 11911.0 62 10093.5 63 8276.0 64 7116.5 65 5957.0 66 4996.0 67 4035.0 68 3430.0 69 2825.0 70 2404.0 71 1983.0 72 1630.0 73 1277.0 74 1078.5 75 707.5 76 535.0 77 434.0 78 333.0 79 220.5 80 108.0 81 89.0 82 70.0 83 51.5 84 33.0 85 24.0 86 15.0 87 9.5 88 4.0 89 4.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 664216.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.11922251391473 #Duplication Level Percentage of deduplicated Percentage of total 1 81.63538621962869 40.0986670073131 2 6.5369173851627815 6.421765991937765 3 3.0484876956180518 4.492180363559826 4 2.058979750630722 4.045419380915003 5 1.4665882980933453 3.6018838475175263 6 1.0939577707791215 3.2240613098235475 7 0.8753790564732624 3.009855706125163 8 0.6417263292130476 2.5216878686122706 9 0.5173242194884472 2.2869507104001268 >10 2.041080528593153 14.365356585834627 >50 0.04616938103757573 1.6485547056869925 >100 0.03297812689743196 3.2031573531054938 >500 0.002198541793162084 0.713509741275959 >1k 0.001570386995115774 1.3309077919973402 >5k 6.281547980463096E-4 2.071878016288893 >10k+ 6.281547980463096E-4 6.964163619606343 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35080 5.281414479627109 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCG 10062 1.5148686571838077 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGC 7091 1.0675744035072927 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTC 6339 0.9543582208197333 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCCTTGTT 2202 0.3315186626037313 No Hit GAACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCT 2129 0.32052826189071026 No Hit GCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 1849 0.27837330025172535 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTC 1329 0.20008551435075336 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTA 1118 0.16831873968708974 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCT 862 0.12977706047430354 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCTGCCTTGTTCGTATGCCG 858 0.12917484673660376 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07768557216327218 0.0 2 0.0 0.0 0.0 0.4852337191516013 0.0 3 0.0 0.0 0.0 0.6178712948799788 0.0 4 0.0 0.0 0.0 1.1538415214327868 0.0 5 0.0 0.0 0.0 2.4731412672985895 0.0 6 0.0 0.0 0.0 2.7885507124188518 0.0 7 0.0 0.0 0.0 3.114649451383285 0.0 8 0.0 0.0 0.0 3.5518566249533285 0.0 9 0.0 0.0 0.0 3.710238837968372 0.0 10 0.0 0.0 0.0 5.7586688667541885 0.0 11 0.0 0.0 0.0 6.155377166463921 0.0 12 0.0 0.0 0.0 7.702313705180242 0.0 13 0.0 0.0 0.0 7.880418418104954 0.0 14 0.0 0.0 0.0 7.999054524431811 0.0 15 0.0 0.0 0.0 8.329368759560143 0.0 16 0.0 0.0 0.0 8.534573090681345 0.0 17 0.0 0.0 0.0 8.740680742409095 0.0 18 0.0 0.0 0.0 8.933539691907452 0.0 19 0.0 0.0 0.0 9.51091211292712 0.0 20 0.0 0.0 0.0 9.707986558589374 0.0 21 0.0 0.0 0.0 9.919514133956424 0.0 22 0.0 0.0 0.0 10.199694075421249 0.0 23 0.0 0.0 0.0 10.41950208968167 0.0 24 0.0 0.0 0.0 10.602575065942403 0.0 25 0.0 0.0 0.0 10.751924072891951 0.0 26 0.0 0.0 0.0 10.896154263071049 0.0 27 0.0 0.0 0.0 11.048213231840245 0.0 28 0.0 0.0 0.0 11.189281799896419 0.0 29 0.0 0.0 0.0 11.35669721897696 0.0 30 0.0 0.0 0.0 11.531640309778746 0.0 31 0.0 0.0 0.0 11.689269755621666 0.0 32 0.0 0.0 0.0 11.85954568995628 0.0 33 0.0 0.0 0.0 12.032230479241692 0.0 34 0.0 0.0 0.0 12.20627024943693 0.0 35 0.0 0.0 0.0 12.382718874582967 0.0 36 0.0 0.0 0.0 12.55510255699953 0.0 37 0.0 0.0 0.0 12.730798414973442 0.0 38 0.0 0.0 0.0 12.91914076143905 0.0 39 0.0 0.0 0.0 13.159424042781264 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGTACG 25 3.8890204E-5 45.000004 7 GCGAGCC 25 3.8890204E-5 45.000004 33 CGTTTTT 22235 0.0 44.50416 1 ACCGGTG 105 0.0 42.85714 17 CGACCAC 1050 0.0 41.999996 12 CACCGGT 145 0.0 41.896553 16 GACCGCC 70 0.0 41.785717 13 CCGATGA 195 0.0 41.53846 18 GCGACCA 1060 0.0 41.39151 11 GAATGAT 4105 0.0 41.053593 1 CGGCGAC 1630 0.0 40.996933 9 ACGGCGA 1590 0.0 40.896225 8 TACGGCT 875 0.0 40.885715 7 ATACGGC 2465 0.0 40.80122 6 ATGATAC 3850 0.0 40.79221 3 TACGGCG 1665 0.0 40.67568 7 ACGGCTG 880 0.0 40.653408 8 TGATACC 1395 0.0 40.64516 4 GGCGACC 1480 0.0 40.591213 10 AATGATA 3830 0.0 40.535248 2 >>END_MODULE