##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933405.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 348971 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.48309458379063 31.0 28.0 31.0 16.0 33.0 2 28.69013184476647 31.0 30.0 33.0 16.0 34.0 3 28.868487639374045 31.0 30.0 33.0 16.0 34.0 4 31.99474741454161 35.0 30.0 37.0 19.0 37.0 5 33.6629834570781 35.0 33.0 37.0 28.0 37.0 6 32.582988271231706 35.0 33.0 37.0 17.0 37.0 7 32.1991626811397 35.0 32.0 35.0 25.0 37.0 8 32.84522496138648 35.0 32.0 35.0 27.0 37.0 9 32.92450375532638 35.0 31.0 37.0 25.0 39.0 10 31.756151657301036 35.0 28.0 39.0 15.0 39.0 11 32.295846932839694 35.0 28.0 39.0 17.0 39.0 12 33.180525029300426 35.0 31.0 39.0 23.0 39.0 13 33.08605299580768 35.0 31.0 39.0 22.0 39.0 14 33.198182657011614 36.0 31.0 40.0 18.0 41.0 15 33.85737210255294 36.0 31.0 40.0 23.0 41.0 16 34.08652868003358 36.0 32.0 40.0 24.0 41.0 17 32.11121841069888 35.0 27.0 39.0 18.0 41.0 18 32.94421312945775 36.0 30.0 39.0 22.0 39.0 19 32.75971355786011 36.0 30.0 37.0 21.0 39.0 20 32.38884319900507 34.0 30.0 37.0 24.0 39.0 21 32.66049041324351 35.0 31.0 37.0 23.0 39.0 22 32.962100002579014 35.0 31.0 37.0 25.0 39.0 23 33.99991403297122 35.0 32.0 38.0 27.0 40.0 24 32.25148508042216 35.0 31.0 37.0 21.0 39.0 25 31.26078671293603 34.0 29.0 37.0 18.0 39.0 26 30.68650690171963 33.0 25.0 37.0 19.0 39.0 27 32.421198323069824 34.0 30.0 37.0 22.0 39.0 28 32.388304472291395 35.0 31.0 37.0 21.0 39.0 29 32.63300388857527 35.0 31.0 38.0 22.0 40.0 30 31.57723421143877 35.0 30.0 38.0 18.0 40.0 31 31.87290634465328 35.0 30.0 37.0 21.0 40.0 32 31.735723025695545 35.0 30.0 37.0 18.0 40.0 33 31.68587361127429 35.0 30.0 38.0 16.0 40.0 34 30.852947666138448 35.0 29.0 38.0 12.0 40.0 35 30.390232999303667 35.0 27.0 38.0 10.0 40.0 36 29.72886285679899 34.0 25.0 38.0 8.0 40.0 37 29.8316077840279 35.0 25.0 38.0 8.0 40.0 38 29.695395892495366 35.0 24.0 38.0 8.0 40.0 39 29.288293296577653 34.0 23.0 38.0 7.0 40.0 40 29.01778944382198 34.0 23.0 38.0 7.0 40.0 41 28.486450163480633 33.0 21.0 37.0 7.0 40.0 42 28.857566961151498 34.0 22.0 38.0 7.0 40.0 43 28.885921752810404 34.0 22.0 38.0 7.0 40.0 44 28.929805055434407 34.0 22.0 38.0 7.0 40.0 45 29.19794194933103 34.0 23.0 38.0 7.0 40.0 46 29.009579592573594 34.0 23.0 38.0 7.0 40.0 47 29.01184912213336 34.0 23.0 38.0 7.0 40.0 48 28.77034481375243 34.0 23.0 37.0 7.0 40.0 49 28.593378819443448 34.0 22.0 37.0 7.0 39.0 50 28.700144138051584 34.0 22.0 37.0 7.0 40.0 51 27.006413140346904 32.0 20.0 35.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 12.0 10 11.0 11 21.0 12 29.0 13 48.0 14 103.0 15 196.0 16 401.0 17 712.0 18 1238.0 19 1972.0 20 3037.0 21 4233.0 22 5747.0 23 7865.0 24 10743.0 25 14797.0 26 18102.0 27 19272.0 28 19334.0 29 20174.0 30 22467.0 31 25034.0 32 28535.0 33 31377.0 34 34966.0 35 37089.0 36 25532.0 37 13183.0 38 2690.0 39 50.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.193414352482012 2.4067902490464825 34.07733020795424 39.32246519051726 2 40.52543047989661 12.115333365809766 33.46323906571033 13.895997088583293 3 13.35669726137702 12.07149018113253 61.022262594886115 13.549549962604344 4 12.092695381564656 2.876456782941849 68.8693329818237 16.16151485366979 5 19.570107544753 3.29597588338286 60.512191557464654 16.621725014399477 6 13.821778887070845 11.38404050766396 62.6576420390233 12.136538566241894 7 51.376475409131416 1.2708792421146742 44.16527447839505 3.187370870358855 8 52.06793687727633 8.545695774147422 35.05850056308404 4.327866785492204 9 47.70281771264661 3.165019442876342 35.78893375094205 13.343229093534992 10 27.173604683483727 19.65894014115786 41.06243785300211 12.105017322356298 11 23.37013677354279 16.910860787859164 47.098182943568375 12.620819495029673 12 18.55770250250021 15.536534554447218 49.62819260053128 16.277570342521297 13 18.563147080989538 16.291038510363325 53.63740826601637 11.508406142630763 14 14.686893753349132 18.66114949379748 50.148866238168786 16.5030905146846 15 11.716732909038287 16.3707012903651 56.193494588375536 15.719071212221072 16 14.493754495359212 16.677317026343164 47.997111507833026 20.831816970464594 17 15.045089706594531 17.26762395729158 51.7825263417304 15.904759994383488 18 15.184069736453745 15.496130050921137 51.31715815927398 18.00264205335114 19 14.872009421986354 18.747689636101565 48.26131684294683 18.118984098965242 20 15.749159672293686 19.441443558347256 52.68403391685842 12.125362852500638 21 16.713136621667704 21.38200595464953 48.63842554252359 13.26643188115918 22 13.87679778548934 16.431737880798117 51.65644136618802 18.035022967524522 23 14.031251880528755 21.58947305076926 49.57116780477461 14.808107263927376 24 14.965426926592754 18.656564585595937 48.05155729272633 18.326451195084978 25 13.85874470944577 22.615919374389275 45.73474586713509 17.790590049029863 26 13.923793094555133 18.6436695312791 49.351092211100635 18.081445163065126 27 14.94078304500947 19.094423318843113 48.42092895971298 17.54386467643443 28 11.40897094600984 20.13319158325477 51.37962753351998 17.078209937215412 29 16.043453467480106 19.971287012387847 46.81277240802244 17.172487112109604 30 16.55065893727559 20.15812202160065 48.726685025403256 14.564534015720504 31 17.073625029013872 19.34687982669047 46.56747981923999 17.012015325055664 32 18.120703439540822 23.787936533408217 43.334546423628325 14.756813603422634 33 17.848187958311723 18.76144436070619 42.11696673935656 21.27340094162552 34 18.290345042997842 24.33124815529084 41.88657510222912 15.491831699482193 35 17.755916680755707 25.418444512581274 38.64705090107774 18.178587905585278 36 19.90967730842964 24.22006413140347 39.120729229649456 16.749529330517436 37 19.26607081963831 26.268658427204556 38.60664639755166 15.85862435560548 38 18.699548099985385 23.87906158391385 38.52612394726209 18.89526636883867 39 20.890847663559438 24.73787220141502 36.60705330815455 17.764226826871003 40 19.878156064544044 24.216625450252312 37.025139624782575 18.88007886042107 41 22.891013866481742 23.413120287932234 35.50237698834574 18.193488857240286 42 18.047344908316163 25.101226176387147 39.37948998627393 17.471938929022755 43 21.12410486831284 22.041659622146252 37.03459599794826 19.799639511592655 44 21.733611102355212 21.879755051279332 37.13145218370581 19.25518166265965 45 18.116118531339282 21.569987190912713 37.43892758997166 22.87496668777635 46 20.41315754031137 24.300300024930436 36.21848233807394 19.068060096684253 47 15.791856629920536 22.43194993280244 42.93078794513011 18.845405492146913 48 19.466660553455732 24.155875416581893 36.27149533915426 20.10596869080812 49 18.180020689398262 22.00211478890796 40.087858303412034 19.730006218281748 50 19.447747807124376 20.83525565161575 37.54294769479412 22.17404884646575 51 18.242490063644258 21.277126179539273 36.47896243527399 24.001421321542477 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 324.5 2 564.0 3 16961.0 4 33358.0 5 22023.0 6 10688.0 7 9950.5 8 9213.0 9 9004.5 10 8796.0 11 8420.0 12 8044.0 13 7573.5 14 7103.0 15 6573.5 16 6044.0 17 5590.5 18 5137.0 19 4720.5 20 4304.0 21 4239.0 22 4174.0 23 4005.0 24 3836.0 25 3884.0 26 4038.0 27 4144.0 28 4353.5 29 4563.0 30 4972.5 31 5382.0 32 5901.0 33 6420.0 34 6778.0 35 7136.0 36 7527.0 37 7918.0 38 8446.0 39 8974.0 40 9667.5 41 10361.0 42 11563.5 43 12766.0 44 13606.5 45 14447.0 46 26110.0 47 37773.0 48 32292.5 49 26812.0 50 24952.5 51 23093.0 52 19660.5 53 16228.0 54 14985.5 55 13743.0 56 12553.5 57 11364.0 58 10233.0 59 9102.0 60 7986.0 61 6870.0 62 5955.0 63 5040.0 64 4359.0 65 3678.0 66 3154.5 67 2631.0 68 2227.5 69 1824.0 70 1509.5 71 1195.0 72 1002.0 73 809.0 74 693.0 75 487.5 76 398.0 77 329.0 78 260.0 79 180.0 80 100.0 81 70.5 82 41.0 83 35.0 84 29.0 85 19.5 86 10.0 87 6.5 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 348971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.14657789443762 #Duplication Level Percentage of deduplicated Percentage of total 1 81.29089755088735 39.13878531042546 2 7.108602136318797 6.845097329536773 3 3.2351094635621074 4.672783493532759 4 2.038907995269157 3.9266577045527247 5 1.4551259035184483 3.5029666329982447 6 1.1329282352971057 3.2727970517723914 7 0.8800988017171681 2.966162185817379 8 0.660164104207249 2.5427713973060753 9 0.4788191413469517 2.074815277758787 >10 1.6115623886014552 11.397624818818146 >50 0.06600273281400006 2.14691388051328 >100 0.032698601577578014 2.838159509342312 >500 0.003027648294220186 0.94226312626547 >1k 0.004238707611908261 3.259145881349533 >5k 0.0012110593176880744 3.5480638139389766 >10k+ 6.055296588440372E-4 6.924992586071693 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23753 6.806582781950363 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCG 6620 1.8970057683876311 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGC 5550 1.5903900324095697 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTC 3180 0.9112505050562941 No Hit GCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 1936 0.5547738923864733 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTACGAGT 1672 0.47912290706104516 No Hit GAACTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCT 1158 0.33183273108653727 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCC 1131 0.32409569849643666 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTACGAGTCGTA 1089 0.31206031446739124 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTC 1013 0.290282000510071 No Hit CTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGCT 865 0.24787159964581584 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCT 745 0.21348478813425759 No Hit GAATGATACCTGTCTCTTCTACACATCTGACGCAGTACGAGTCGTATGCCG 544 0.15588687885239746 No Hit TCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 540 0.1547406518020122 No Hit CCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 538 0.15416753827681956 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGC 452 0.12952365669353616 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTACGAGTCGT 387 0.11089746712477543 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.8655676259631887E-4 0.0 0.0 0.3215166876330698 0.0 2 2.8655676259631887E-4 0.0 0.0 1.3840691633402202 0.0 3 2.8655676259631887E-4 0.0 0.0 1.671485596224328 0.0 4 2.8655676259631887E-4 0.0 0.0 2.4735579747314245 0.0 5 2.8655676259631887E-4 0.0 0.0 4.037584784982133 0.0 6 2.8655676259631887E-4 0.0 0.0 4.410395133119944 0.0 7 2.8655676259631887E-4 0.0 0.0 4.957145436153721 0.0 8 2.8655676259631887E-4 0.0 0.0 5.648033790773446 0.0 9 2.8655676259631887E-4 0.0 0.0 5.876992644087904 0.0 10 2.8655676259631887E-4 0.0 0.0 8.576070790982632 0.0 11 2.8655676259631887E-4 0.0 0.0 9.545778875608574 0.0 12 2.8655676259631887E-4 0.0 0.0 12.069770840556952 0.0 13 2.8655676259631887E-4 0.0 0.0 12.395585879628966 0.0 14 2.8655676259631887E-4 0.0 0.0 12.60706477042505 0.0 15 2.8655676259631887E-4 0.0 0.0 13.1947926905101 0.0 16 2.8655676259631887E-4 0.0 0.0 13.571901390086856 0.0 17 5.731135251926377E-4 0.0 0.0 13.983110344412573 0.0 18 5.731135251926377E-4 0.0 0.0 14.34990300053586 0.0 19 5.731135251926377E-4 0.0 0.0 15.260580392066963 0.0 20 8.596702877889567E-4 0.0 0.0 15.655742167687286 0.0 21 8.596702877889567E-4 0.0 0.0 16.038868559278566 0.0 22 8.596702877889567E-4 0.0 0.0 16.579601170297817 0.0 23 8.596702877889567E-4 0.0 0.0 16.929200420665328 0.0 24 0.0011462270503852755 0.0 0.0 17.196844436930288 0.0 25 0.0011462270503852755 0.0 0.0 17.444716036576104 0.0 26 0.0011462270503852755 0.0 0.0 17.675394230466143 0.0 27 0.0011462270503852755 0.0 0.0 17.945903814357067 0.0 28 0.0011462270503852755 0.0 0.0 18.176295451484506 0.0 29 0.0011462270503852755 0.0 0.0 18.452536170627358 0.0 30 0.0011462270503852755 0.0 0.0 18.729063446532805 0.0 31 0.0011462270503852755 0.0 0.0 18.9551567322213 0.0 32 0.0011462270503852755 0.0 0.0 19.19443162898923 0.0 33 0.0011462270503852755 0.0 0.0 19.438291433958696 0.0 34 0.0011462270503852755 0.0 0.0 19.71367248281376 0.0 35 0.0011462270503852755 0.0 0.0 19.99765023454671 0.0 36 0.0011462270503852755 0.0 0.0 20.23119399606271 0.0 37 0.0011462270503852755 0.0 0.0 20.458146952038994 0.0 38 0.0011462270503852755 2.8655676259631887E-4 0.0 20.740978476721562 0.0 39 0.0011462270503852755 2.8655676259631887E-4 0.0 21.226405632559725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTTCG 30 2.1611413E-6 45.000004 1 CGACCCT 30 2.1611413E-6 45.000004 12 TATACGG 25 3.8852028E-5 45.000004 27 GGTACCA 20 7.0265285E-4 45.0 8 ACCGCCT 35 1.2086821E-7 45.0 14 GACCGCC 45 3.8380676E-10 45.0 13 CTACGGG 20 7.0265285E-4 45.0 3 GTCGTTG 20 7.0265285E-4 45.0 1 AGCGACT 20 7.0265285E-4 45.0 19 GCGATCG 20 7.0265285E-4 45.0 9 CACCGAC 40 6.7921064E-9 45.0 16 CGTTTTT 9920 0.0 44.455643 1 CGATGAA 105 0.0 42.857147 19 TGTTCGG 90 0.0 42.5 2 ACCGGTG 80 0.0 42.1875 17 TGCTACG 80 0.0 42.1875 4 GCTACGG 80 0.0 42.1875 5 ACGGCTG 760 0.0 41.74342 8 GCGACCA 670 0.0 41.641792 11 CGACCAC 670 0.0 41.30597 12 >>END_MODULE