SRR2933402.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933402.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	580823
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCG	22166	3.8163089271602537	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC	20294	3.49400764088199	No Hit
GAATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC	20204	3.4785123867339967	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20189	3.4759298443759974	No Hit
GAACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT	5275	0.9081940625629494	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGAGAACTT	4749	0.8176329105424543	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTC	4603	0.7924961649245985	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTA	4185	0.7205293178816955	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCT	3737	0.6433973861227947	No Hit
GCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC	3626	0.6242865726736029	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGT	1662	0.28614569326627903	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTT	1414	0.24344765961403042	No Hit
GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTAT	1064	0.18318833792738923	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATG	1019	0.1754407108533925	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	602	0.10364603330102287	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACCCG	20	7.0304004E-4	45.000004	37
GGAACGT	20	7.0304004E-4	45.000004	8
CGTTAGG	35	1.2105374E-7	45.0	2
TATCGGG	35	1.2105374E-7	45.0	3
CGATACG	25	3.8884144E-5	45.0	4
CGTTTTT	18290	0.0	44.483326	1
ACGGCTG	2430	0.0	43.24074	8
CGGCTGT	2505	0.0	43.203594	9
TACGGCT	2445	0.0	42.97546	7
GATACCT	2605	0.0	42.58157	5
TGATACC	2615	0.0	42.50478	4
TGATGCG	85	0.0	42.35294	4
CCGATGA	645	0.0	42.2093	18
CACCGGT	225	0.0	42.0	16
CGACCCT	65	0.0	41.538464	12
TACCTGT	2700	0.0	41.333336	7
ATACCTG	2685	0.0	41.312847	6
GTATGAT	170	0.0	41.02941	1
CCGGTGA	105	0.0	40.714287	18
GATGAAT	725	0.0	40.655174	20